RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C YBR121C-AP0C5L4 52 aa3.92□□□□□ -1.78
YIR043CYIR043C PRP18P33411 251 aaPredicted RBP3.92□□□□□ -1.78
YIR043CYIR043C DRE2P36152 348 aa3.92□□□□□ -1.78
YIR043CYIR043C SPL2P38839 148 aa3.92□□□□□ -1.78
YIR043CYIR043C SUR2P38992 349 aa3.92□□□□□ -1.78
YIR043CYIR043C ERG28P40030 148 aa3.92□□□□□ -1.78
YIR043CYIR043C YJL028WP47062 111 aa3.92□□□□□ -1.78
YIR043CYIR043C GOT1Q03554 138 aa3.92□□□□□ -1.78
YIR043CYIR043C YDR124WQ04608 324 aa3.92□□□□□ -1.78
YIR043CYIR043C YDR222WQ04925 415 aa3.92□□□□□ -1.78
YIR043CYIR043C YBL112CQ3E7Y4 105 aa3.92□□□□□ -1.78
YIR043CYIR043C CAB3P36076 571 aa3.91□□□□□ -1.78
YIR043CYIR043C URA8P38627 578 aaPredicted RBP3.91□□□□□ -1.78
YIR043CYIR043C YHB1P39676 399 aaKnown RBP3.91□□□□□ -1.78
YIR043CYIR043C YIR035CP40579 254 aa3.91□□□□□ -1.78
YIR043CYIR043C ECO1P43605 281 aa3.91□□□□□ -1.78
YIR043CYIR043C YFR045WP43617 309 aa3.91□□□□□ -1.78
YIR043CYIR043C RAD17P48581 401 aa3.91□□□□□ -1.78
YIR043CYIR043C MRH4P53166 561 aa3.91□□□□□ -1.78
YIR043CYIR043C YPR011CQ12251 326 aa3.91□□□□□ -1.78
YIR043CYIR043C YKL183C-AQ3E765 70 aa3.91□□□□□ -1.78
YIR043CYIR043C YOL163WP0CF20 169 aa3.9□□□□□ -1.79
YIR043CYIR043C GDH2P33327 1092 aaKnown RBP3.9□□□□□ -1.79
YIR043CYIR043C SSH1P38353 490 aaKnown RBP3.9□□□□□ -1.79
YIR043CYIR043C YNL194CP40169 301 aa3.9□□□□□ -1.79
YIR043CYIR043C YMR144WP40214 342 aaKnown RBP3.9□□□□□ -1.79
YIR043CYIR043C PRE6P40303 254 aaKnown RBP3.9□□□□□ -1.79
YIR043CYIR043C YRB1P41920 201 aaKnown RBP3.9□□□□□ -1.79
YIR043CYIR043C TRM9P49957 279 aa3.9□□□□□ -1.79
YIR043CYIR043C YGL034CP53186 121 aa3.9□□□□□ -1.79
YIR043CYIR043C ALG9P53868 555 aaKnown RBP3.9□□□□□ -1.79
YIR043CYIR043C CDC123Q05791 360 aa3.9□□□□□ -1.79
YIR043CYIR043C SEI1Q06058 285 aa3.9□□□□□ -1.79
YIR043CYIR043C SLD7Q08457 257 aa3.9□□□□□ -1.79
YIR043CYIR043C ISD11Q6Q560 94 aa3.9□□□□□ -1.79
YIR043CYIR043C DPB2P24482 689 aaPredicted RBP3.89□□□□□ -1.79
YIR043CYIR043C SSO1P32867 290 aa3.89□□□□□ -1.79
YIR043CYIR043C NTF2P33331 125 aaKnown RBP3.89□□□□□ -1.79
YIR043CYIR043C AST1P35183 429 aa3.89□□□□□ -1.79
YIR043CYIR043C YIL059CP40520 121 aa3.89□□□□□ -1.79
YIR043CYIR043C MIG2P53035 382 aa3.89□□□□□ -1.79
YIR043CYIR043C EMI1Q04406 187 aa3.89□□□□□ -1.79
YIR043CYIR043C SYC1Q08553 188 aaPredicted RBP3.89□□□□□ -1.79
YIR043CYIR043C NCB2Q92317 146 aa3.89□□□□□ -1.79
YIR043CYIR043C SIR4P11978 1358 aa3.89□□□□□ -1.79
YIR043CYIR043C BMH1P29311 267 aaKnown RBP3.88□□□□□ -1.79
YIR043CYIR043C OST3P48439 350 aa3.88□□□□□ -1.79
YIR043CYIR043C YLR179CQ06252 201 aaKnown RBP3.88□□□□□ -1.79
YIR043CYIR043C YOR186WQ08560 144 aa3.88□□□□□ -1.79
YIR043CYIR043C YPR063CQ12160 140 aa3.88□□□□□ -1.79
YIR043CYIR043C TIM22Q12328 207 aa3.88□□□□□ -1.79
YIR043CYIR043C PST1Q12355 444 aa3.88□□□□□ -1.79
YIR043CYIR043C SWI1P09547 1314 aa3.88□□□□□ -1.79
YIR043CYIR043C SFC1P33303 322 aa3.87□□□□□ -1.79
YIR043CYIR043C TKL2P33315 681 aa3.87□□□□□ -1.79
YIR043CYIR043C TEM1P38987 245 aa3.87□□□□□ -1.79
YIR043CYIR043C MIC26P50087 233 aa3.87□□□□□ -1.79
YIR043CYIR043C NSA1P53136 463 aaPredicted RBP3.87□□□□□ -1.79
YIR043CYIR043C YNL046WP53956 172 aa3.87□□□□□ -1.79
YIR043CYIR043C SSQ1Q05931 657 aaPredicted RBP3.87□□□□□ -1.79
YIR043CYIR043C RPL28P02406 149 aaKnown RBP3.86□□□□□ -1.79
YIR043CYIR043C BCY1P07278 416 aaKnown RBP3.86□□□□□ -1.79
YIR043CYIR043C SLX1P38324 304 aa3.86□□□□□ -1.79
YIR043CYIR043C CWC23P52868 283 aaPredicted RBP3.86□□□□□ -1.79
YIR043CYIR043C ALG13P53178 202 aa3.86□□□□□ -1.79
YIR043CYIR043C YMR114CQ04471 368 aaKnown RBP3.86□□□□□ -1.79
YIR043CYIR043C HEM25Q07534 307 aa3.86□□□□□ -1.79
YIR043CYIR043C SMT3Q12306 101 aaKnown RBP3.86□□□□□ -1.79
YIR043CYIR043C SNA3P14359 133 aa3.85□□□□□ -1.79
YIR043CYIR043C PPH21P23594 369 aa3.85□□□□□ -1.79
YIR043CYIR043C MRPS17Q03246 237 aaPredicted RBP3.85□□□□□ -1.79
YIR043CYIR043C YRA1Q12159 226 aaKnown RBP3.85□□□□□ -1.79
YIR043CYIR043C YPL247CQ12523 523 aa3.85□□□□□ -1.79
YIR043CYIR043C YDR157WA0A023PZE8 133 aa3.84□□□□□ -1.79
YIR043CYIR043C RNP1P32385 249 aa3.84□□□□□ -1.79
YIR043CYIR043C ECM13P38195 257 aa3.84□□□□□ -1.79
YIR043CYIR043C MCM22P47167 239 aa3.84□□□□□ -1.79
YIR043CYIR043C FYV6P53913 173 aa3.84□□□□□ -1.79
YIR043CYIR043C YMR226CQ05016 267 aaKnown RBP3.84□□□□□ -1.79
YIR043CYIR043C IES4Q08561 116 aa3.84□□□□□ -1.79
YIR043CYIR043C GET4Q12125 312 aa3.84□□□□□ -1.79
YIR043CYIR043C JLP1Q12358 412 aa3.84□□□□□ -1.79
YIR043CYIR043C DCN1Q12395 269 aa3.84□□□□□ -1.79
YIR043CYIR043C TOM40P23644 387 aaKnown RBP3.83□□□□□ -1.8
YIR043CYIR043C PRY2P36110 329 aa3.83□□□□□ -1.8
YIR043CYIR043C ECM14P38836 430 aa3.83□□□□□ -1.8
YIR043CYIR043C RFC4P40339 323 aaKnown RBP3.83□□□□□ -1.8
YIR043CYIR043C ADO1P47143 340 aaKnown RBP3.83□□□□□ -1.8
YIR043CYIR043C YJR149WP47177 404 aa3.83□□□□□ -1.8
YIR043CYIR043C MDM34P53083 459 aa3.83□□□□□ -1.8
YIR043CYIR043C GIM3P53900 129 aa3.83□□□□□ -1.8
YIR043CYIR043C MRX4Q12467 430 aa3.83□□□□□ -1.8
YIR043CYIR043C YDL012CQ12489 107 aa3.83□□□□□ -1.8
YIR043CYIR043C SPT3P06844 337 aa3.82□□□□□ -1.8
YIR043CYIR043C RPS23AP0CX29 145 aaKnown RBP3.82□□□□□ -1.8
YIR043CYIR043C RPS23BP0CX30 145 aa3.82□□□□□ -1.8
YIR043CYIR043C MATALPHA2P0CY08 210 aa3.82□□□□□ -1.8
YIR043CYIR043C HMLALPHA2P0CY09 210 aa3.82□□□□□ -1.8
YIR043CYIR043C ZWF1P11412 505 aaKnown RBP3.82□□□□□ -1.8
YIR043CYIR043C CBF1P17106 351 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms