RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W LOA1Q06508 300 aa1.91□□□□□ -2.1
SEC28YIL076W FIG2P25653 1609 aa1.91□□□□□ -2.1
SEC28YIL076W HKR1P41809 1802 aa1.9□□□□□ -2.11
SEC28YIL076W YMR316C-AI2HB70 103 aa1.9□□□□□ -2.11
SEC28YIL076W YHL026CP38740 315 aa1.9□□□□□ -2.11
SEC28YIL076W PRO2P54885 456 aaKnown RBP1.9□□□□□ -2.11
SEC28YIL076W LYS2P07702 1392 aa1.89□□□□□ -2.11
SEC28YIL076W YPR117WQ06116 2489 aa1.89□□□□□ -2.11
SEC28YIL076W YOR062CP36025 268 aa1.89□□□□□ -2.11
SEC28YIL076W HMT1P38074 348 aa1.89□□□□□ -2.11
SEC28YIL076W SDC1Q03323 175 aa1.89□□□□□ -2.11
SEC28YIL076W EBS1Q03466 884 aaKnown RBP1.89□□□□□ -2.11
SEC28YIL076W VAC14Q06708 880 aa1.89□□□□□ -2.11
SEC28YIL076W TAO3P40468 2376 aa1.89□□□□□ -2.11
SEC28YIL076W SSK22P25390 1331 aaPredicted RBP1.89□□□□□ -2.11
SEC28YIL076W SAR1P20606 190 aaKnown RBP1.88□□□□□ -2.11
SEC28YIL076W GPI12P23797 304 aa1.88□□□□□ -2.11
SEC28YIL076W YCR102CP25608 368 aa1.88□□□□□ -2.11
SEC28YIL076W SPT8P38915 602 aa1.88□□□□□ -2.11
SEC28YIL076W YDR089WP38966 869 aa1.88□□□□□ -2.11
SEC28YIL076W AGP3P43548 558 aa1.88□□□□□ -2.11
SEC28YIL076W IBA57P47158 497 aa1.88□□□□□ -2.11
SEC28YIL076W YNL050CP53952 270 aa1.88□□□□□ -2.11
SEC28YIL076W RRG8Q06109 277 aa1.88□□□□□ -2.11
SEC28YIL076W GSC2P40989 1895 aa1.88□□□□□ -2.11
SEC28YIL076W VMA2P16140 517 aaKnown RBP1.87□□□□□ -2.11
SEC28YIL076W DPB2P24482 689 aaPredicted RBP1.87□□□□□ -2.11
SEC28YIL076W CAM1P29547 415 aaKnown RBP1.87□□□□□ -2.11
SEC28YIL076W SFC1P33303 322 aa1.87□□□□□ -2.11
SEC28YIL076W MGR3Q04472 501 aa1.87□□□□□ -2.11
SEC28YIL076W CUR1Q06469 252 aa1.87□□□□□ -2.11
SEC28YIL076W YPL247CQ12523 523 aa1.87□□□□□ -2.11
SEC28YIL076W TPM1P17536 199 aaKnown RBP1.86□□□□□ -2.11
SEC28YIL076W TRX1P22217 103 aaKnown RBP1.86□□□□□ -2.11
SEC28YIL076W GDH2P33327 1092 aaKnown RBP1.86□□□□□ -2.11
SEC28YIL076W RPC25P35718 212 aa1.86□□□□□ -2.11
SEC28YIL076W TDA11P38854 504 aa1.86□□□□□ -2.11
SEC28YIL076W TRM44Q02648 567 aaKnown RBP1.86□□□□□ -2.11
SEC28YIL076W FKS1P38631 1876 aaKnown RBP1.86□□□□□ -2.11
SEC28YIL076W ILV1P00927 576 aaKnown RBP1.85□□□□□ -2.11
SEC28YIL076W RPS3P05750 240 aaKnown RBP1.85□□□□□ -2.11
SEC28YIL076W GCD2P12754 651 aaPredicted RBP1.85□□□□□ -2.11
SEC28YIL076W LSM4P40070 187 aaKnown RBP1.85□□□□□ -2.11
SEC28YIL076W TIF34P40217 347 aaKnown RBP1.85□□□□□ -2.11
SEC28YIL076W KEL2P50090 882 aa1.85□□□□□ -2.11
SEC28YIL076W GPN3Q06543 272 aa1.85□□□□□ -2.11
SEC28YIL076W BER1Q06688 274 aaKnown RBP1.85□□□□□ -2.11
SEC28YIL076W COS2P0CX12 379 aa1.84□□□□□ -2.11
SEC28YIL076W COS3P0CX13 379 aa1.84□□□□□ -2.11
SEC28YIL076W YJL118WP47022 219 aa1.84□□□□□ -2.11
SEC28YIL076W NIF3P53081 288 aa1.84□□□□□ -2.11
SEC28YIL076W SMT3Q12306 101 aaKnown RBP1.84□□□□□ -2.11
SEC28YIL076W PPH21P23594 369 aa1.83□□□□□ -2.12
SEC28YIL076W HIS2P38635 335 aa1.83□□□□□ -2.12
SEC28YIL076W MNN9P39107 395 aaKnown RBP1.83□□□□□ -2.12
SEC28YIL076W TAD2P47058 250 aa1.83□□□□□ -2.12
SEC28YIL076W YJL028WP47062 111 aa1.83□□□□□ -2.12
SEC28YIL076W MDM34P53083 459 aa1.83□□□□□ -2.12
SEC28YIL076W PEX31P53203 462 aa1.83□□□□□ -2.12
SEC28YIL076W GEP5Q12393 293 aa1.83□□□□□ -2.12
SEC28YIL076W SWI1P09547 1314 aa1.83□□□□□ -2.12
SEC28YIL076W SAC3P46674 1301 aa1.83□□□□□ -2.12
SEC28YIL076W YAL064W-BO13512 126 aa1.82□□□□□ -2.12
SEC28YIL076W CSM1P25651 190 aa1.82□□□□□ -2.12
SEC28YIL076W DRE2P36152 348 aa1.82□□□□□ -2.12
SEC28YIL076W NPT1P39683 429 aaKnown RBP1.82□□□□□ -2.12
SEC28YIL076W PEX12Q04370 399 aa1.82□□□□□ -2.12
SEC28YIL076W DUR1,2P32528 1835 aaKnown RBP1.82□□□□□ -2.12
SEC28YIL076W PEX3P28795 441 aa1.81□□□□□ -2.12
SEC28YIL076W DOA4P32571 926 aa1.81□□□□□ -2.12
SEC28YIL076W TEM1P38987 245 aa1.81□□□□□ -2.12
SEC28YIL076W RTR1P40084 226 aaPredicted RBP1.81□□□□□ -2.12
SEC28YIL076W OSW5P40219 148 aa1.81□□□□□ -2.12
SEC28YIL076W SER33P40510 469 aa1.81□□□□□ -2.12
SEC28YIL076W AGX1P43567 385 aa1.81□□□□□ -2.12
SEC28YIL076W SEC10Q06245 871 aa1.81□□□□□ -2.12
SEC28YIL076W YDR034W-BQ6Q5X2 51 aa1.81□□□□□ -2.12
SEC28YIL076W RNP1P32385 249 aa1.8□□□□□ -2.12
SEC28YIL076W YFH7P43591 353 aa1.8□□□□□ -2.12
SEC28YIL076W CPD1P53314 239 aa1.8□□□□□ -2.12
SEC28YIL076W RAD3P06839 778 aa1.79□□□□□ -2.12
SEC28YIL076W SCM4P32564 187 aa1.79□□□□□ -2.12
SEC28YIL076W MAL32P38158 584 aa1.79□□□□□ -2.12
SEC28YIL076W LOC1P43586 204 aaPredicted RBP1.79□□□□□ -2.12
SEC28YIL076W MAL12P53341 584 aa1.79□□□□□ -2.12
SEC28YIL076W YOS9Q99220 542 aa1.79□□□□□ -2.12
SEC28YIL076W AI5_BETAQ9ZZX0 354 aa1.79□□□□□ -2.12
SEC28YIL076W TUS1Q06412 1307 aa1.79□□□□□ -2.12
SEC28YIL076W TOR2P32600 2474 aaKnown RBP1.78□□□□□ -2.12
SEC28YIL076W FLO1P32768 1537 aa1.78□□□□□ -2.12
SEC28YIL076W VPS45P38932 577 aa1.78□□□□□ -2.12
SEC28YIL076W ATC1Q04005 294 aa1.78□□□□□ -2.12
SEC28YIL076W BOP2Q06150 570 aa1.78□□□□□ -2.12
SEC28YIL076W SFH1Q06168 426 aa1.78□□□□□ -2.12
SEC28YIL076W REX3Q12090 404 aa1.78□□□□□ -2.12
SEC28YIL076W PST1Q12355 444 aa1.78□□□□□ -2.12
SEC28YIL076W TOR1P35169 2470 aa1.77□□□□□ -2.13
SEC28YIL076W PUT1P09368 476 aa1.77□□□□□ -2.13
SEC28YIL076W SNX4P47057 423 aa1.77□□□□□ -2.13
SEC28YIL076W VBA1Q04301 562 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 104.2 ms