RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W YML018CQ03730 393 aa2.98□□□□□ -1.93
USE1YGL098W UPS3Q04006 179 aa2.98□□□□□ -1.93
USE1YGL098W YDR391CQ04170 232 aa2.98□□□□□ -1.93
USE1YGL098W TMN2Q04562 672 aa2.98□□□□□ -1.93
USE1YGL098W SUE1Q06524 206 aa2.98□□□□□ -1.93
USE1YGL098W CRD1Q07560 283 aa2.98□□□□□ -1.93
USE1YGL098W TEN1Q07921 160 aa2.98□□□□□ -1.93
USE1YGL098W CSI2Q08054 341 aa2.98□□□□□ -1.93
USE1YGL098W TY2A-BQ12260 438 aa2.98□□□□□ -1.93
USE1YGL098W PRS5Q12265 496 aaKnown RBP2.98□□□□□ -1.93
USE1YGL098W TY2A-OR2Q12293 438 aa2.98□□□□□ -1.93
USE1YGL098W TY2A-DR1Q12392 438 aa2.98□□□□□ -1.93
USE1YGL098W TY2A-OR1Q12439 438 aa2.98□□□□□ -1.93
USE1YGL098W HUT1Q12520 339 aa2.98□□□□□ -1.93
USE1YGL098W RPS25AQ3E792 108 aaPredicted RBP2.98□□□□□ -1.93
USE1YGL098W TY2A-DR3Q99303 438 aa2.98□□□□□ -1.93
USE1YGL098W CDC9P04819 755 aa2.97□□□□□ -1.93
USE1YGL098W SCH9P11792 824 aaKnown RBP2.97□□□□□ -1.93
USE1YGL098W APE1P14904 514 aa2.97□□□□□ -1.93
USE1YGL098W VBA3P25594 458 aa2.97□□□□□ -1.93
USE1YGL098W TIP1P27654 210 aaPredicted RBP2.97□□□□□ -1.93
USE1YGL098W NTH1P32356 751 aa2.97□□□□□ -1.93
USE1YGL098W PPG1P32838 368 aa2.97□□□□□ -1.93
USE1YGL098W TCD2P36101 447 aaKnown RBP2.97□□□□□ -1.93
USE1YGL098W PAU24P38155 120 aa2.97□□□□□ -1.93
USE1YGL098W MIX23P38162 196 aa2.97□□□□□ -1.93
USE1YGL098W QDR3P38227 689 aa2.97□□□□□ -1.93
USE1YGL098W YBR053CP38235 358 aa2.97□□□□□ -1.93
USE1YGL098W YBR096WP38256 230 aa2.97□□□□□ -1.93
USE1YGL098W PFS1P38872 237 aa2.97□□□□□ -1.93
USE1YGL098W PAC2P39937 518 aa2.97□□□□□ -1.93
USE1YGL098W NSA2P40078 261 aaKnown RBP2.97□□□□□ -1.93
USE1YGL098W PUG1P40100 303 aa2.97□□□□□ -1.93
USE1YGL098W ELO3P40319 345 aa2.97□□□□□ -1.93
USE1YGL098W YIL067CP40514 678 aa2.97□□□□□ -1.93
USE1YGL098W MEP2P41948 499 aa2.97□□□□□ -1.93
USE1YGL098W PAU5P43575 122 aa2.97□□□□□ -1.93
USE1YGL098W RMD8P43620 662 aa2.97□□□□□ -1.93
USE1YGL098W RPA43P46669 326 aa2.97□□□□□ -1.93
USE1YGL098W UBX6P47049 396 aa2.97□□□□□ -1.93
USE1YGL098W RIB4P50861 169 aaPredicted RBP2.97□□□□□ -1.93
USE1YGL098W YGL262WP53054 175 aa2.97□□□□□ -1.93
USE1YGL098W LCL3P53153 274 aa2.97□□□□□ -1.93
USE1YGL098W RTT102P53330 157 aa2.97□□□□□ -1.93
USE1YGL098W SMM1P53720 384 aaKnown RBP2.97□□□□□ -1.93
USE1YGL098W EFM6P53970 246 aa2.97□□□□□ -1.93
USE1YGL098W DYN2Q02647 92 aa2.97□□□□□ -1.93
USE1YGL098W OAZ1Q02803 292 aa2.97□□□□□ -1.93
USE1YGL098W ELC1Q03071 99 aa2.97□□□□□ -1.93
USE1YGL098W GOT1Q03554 138 aa2.97□□□□□ -1.93
USE1YGL098W YDR415CQ04033 374 aaPredicted RBP2.97□□□□□ -1.93
USE1YGL098W CRF1Q04930 467 aa2.97□□□□□ -1.93
USE1YGL098W YLR456WQ06199 204 aa2.97□□□□□ -1.93
USE1YGL098W KEI1Q06346 221 aa2.97□□□□□ -1.93
USE1YGL098W CTR3Q06686 241 aa2.97□□□□□ -1.93
USE1YGL098W SHS1Q07657 551 aa2.97□□□□□ -1.93
USE1YGL098W GUD1Q07729 489 aa2.97□□□□□ -1.93
USE1YGL098W COQ10Q08058 207 aa2.97□□□□□ -1.93
USE1YGL098W IRC10Q08118 586 aa2.97□□□□□ -1.93
USE1YGL098W NAT5Q08689 176 aa2.97□□□□□ -1.93
USE1YGL098W ALG6Q12001 544 aaKnown RBP2.97□□□□□ -1.93
USE1YGL098W FSF1Q12029 327 aaKnown RBP2.97□□□□□ -1.93
USE1YGL098W PST1Q12355 444 aa2.97□□□□□ -1.93
USE1YGL098W ERP3Q12403 225 aa2.97□□□□□ -1.93
USE1YGL098W ISA2Q12425 185 aa2.97□□□□□ -1.93
USE1YGL098W RPL13AQ12690 199 aaPredicted RBP2.97□□□□□ -1.93
USE1YGL098W COX19Q3E731 98 aa2.97□□□□□ -1.93
USE1YGL098W MYO1P08964 1928 aa2.97□□□□□ -1.93
USE1YGL098W MOT1P32333 1867 aa2.96□□□□□ -1.93
USE1YGL098W SEC4P07560 215 aaKnown RBP2.96□□□□□ -1.94
USE1YGL098W YPR170W-BP0C5R9 85 aa2.96□□□□□ -1.94
USE1YGL098W HVG1P0CE11 249 aa2.96□□□□□ -1.94
USE1YGL098W YFL068WP0CX99 160 aa2.96□□□□□ -1.94
USE1YGL098W YLL066W-AP0CY00 160 aa2.96□□□□□ -1.94
USE1YGL098W YLL067W-AP0CY01 160 aa2.96□□□□□ -1.94
USE1YGL098W BGL2P15703 313 aaKnown RBP2.96□□□□□ -1.94
USE1YGL098W RPB5P20434 215 aa2.96□□□□□ -1.94
USE1YGL098W RBK1P25332 333 aa2.96□□□□□ -1.94
USE1YGL098W YCR007CP25354 239 aa2.96□□□□□ -1.94
USE1YGL098W GEX1P25596 615 aa2.96□□□□□ -1.94
USE1YGL098W ATS1P31386 333 aa2.96□□□□□ -1.94
USE1YGL098W MRP49P32388 137 aa2.96□□□□□ -1.94
USE1YGL098W PAU2P32612 120 aa2.96□□□□□ -1.94
USE1YGL098W UTR5P32630 166 aa2.96□□□□□ -1.94
USE1YGL098W FMT1P32785 401 aa2.96□□□□□ -1.94
USE1YGL098W ALK2P32789 676 aaPredicted RBP2.96□□□□□ -1.94
USE1YGL098W PRP18P33411 251 aaPredicted RBP2.96□□□□□ -1.94
USE1YGL098W LDB7P38210 180 aa2.96□□□□□ -1.94
USE1YGL098W ZTA1P38230 334 aaKnown RBP2.96□□□□□ -1.94
USE1YGL098W URA8P38627 578 aaPredicted RBP2.96□□□□□ -1.94
USE1YGL098W RPS20P38701 121 aaKnown RBP2.96□□□□□ -1.94
USE1YGL098W DOG1P38774 246 aa2.96□□□□□ -1.94
USE1YGL098W TRR2P38816 342 aa2.96□□□□□ -1.94
USE1YGL098W YHR177WP38867 453 aa2.96□□□□□ -1.94
USE1YGL098W YHR210CP38893 341 aa2.96□□□□□ -1.94
USE1YGL098W HSP10P38910 106 aa2.96□□□□□ -1.94
USE1YGL098W YEL028WP39989 153 aa2.96□□□□□ -1.94
USE1YGL098W SMB1P40018 196 aaKnown RBP2.96□□□□□ -1.94
USE1YGL098W YIL152WP40455 235 aa2.96□□□□□ -1.94
USE1YGL098W YIL012WP40551 113 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms