RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C CDC39P25655 2108 aaKnown RBP9.38□□□□□ -0.91
SPC25YER018C PET54P10834 293 aa9.38□□□□□ -0.91
SPC25YER018C CDC34P14682 295 aa9.38□□□□□ -0.91
SPC25YER018C CLB6P32943 380 aa9.38□□□□□ -0.91
SPC25YER018C MCH2P36032 473 aa9.38□□□□□ -0.91
SPC25YER018C TOK1P40310 691 aa9.38□□□□□ -0.91
SPC25YER018C FLX1P40464 311 aa9.38□□□□□ -0.91
SPC25YER018C AVT7P40501 490 aa9.38□□□□□ -0.91
SPC25YER018C AIM25P47140 327 aa9.38□□□□□ -0.91
SPC25YER018C ACS1Q01574 713 aa9.38□□□□□ -0.91
SPC25YER018C PHO92Q06390 306 aa9.38□□□□□ -0.91
SPC25YER018C YLR031WQ07978 186 aa9.38□□□□□ -0.91
SPC25YER018C YLR358CO13565 187 aa9.37□□□□□ -0.91
SPC25YER018C DEG1P31115 442 aaKnown RBP9.37□□□□□ -0.91
SPC25YER018C YND1P40009 630 aa9.37□□□□□ -0.91
SPC25YER018C YFL051CP43552 160 aa9.37□□□□□ -0.91
SPC25YER018C YDR391CQ04170 232 aa9.37□□□□□ -0.91
SPC25YER018C UTP15Q04305 513 aaKnown RBP9.37□□□□□ -0.91
SPC25YER018C MSI1P13712 422 aa9.36□□□□□ -0.91
SPC25YER018C URA6P15700 204 aa9.36□□□□□ -0.91
SPC25YER018C RPI1P23250 407 aaKnown RBP9.36□□□□□ -0.91
SPC25YER018C ARO4P32449 370 aaKnown RBP9.36□□□□□ -0.91
SPC25YER018C ARO9P38840 513 aaPredicted RBP9.36□□□□□ -0.91
SPC25YER018C SOL3P38858 249 aa9.36□□□□□ -0.91
SPC25YER018C OTU1P43558 301 aa9.36□□□□□ -0.91
SPC25YER018C UBC13P52490 153 aa9.36□□□□□ -0.91
SPC25YER018C HNT1Q04344 158 aaKnown RBP9.36□□□□□ -0.91
SPC25YER018C WTM2Q12206 467 aa9.36□□□□□ -0.91
SPC25YER018C NCE102Q12207 173 aaRIP-Chip data9.36□□□□□ -0.91not detected
SPC25YER018C ERP4Q12450 207 aa9.36□□□□□ -0.91
SPC25YER018C SPS2P08459 502 aa9.35□□□□□ -0.91
SPC25YER018C GLC7P32598 312 aaKnown RBP9.35□□□□□ -0.91
SPC25YER018C YKL063CP35725 167 aa9.35□□□□□ -0.91
SPC25YER018C YHL037CP38733 133 aa9.35□□□□□ -0.91
SPC25YER018C TY1A-MR1Q04215 440 aa9.35□□□□□ -0.91
SPC25YER018C MRX9Q07349 420 aaKnown RBP9.35□□□□□ -0.91
SPC25YER018C RSC58Q07979 502 aa9.35□□□□□ -0.91
SPC25YER018C RFU1Q08003 200 aa9.35□□□□□ -0.91
SPC25YER018C RRS1Q08746 203 aaKnown RBP9.35□□□□□ -0.91
SPC25YER018C CHO1P08456 276 aa9.34□□□□□ -0.91
SPC25YER018C YCP4P25349 247 aaKnown RBP9.34□□□□□ -0.91
SPC25YER018C VMA5P31412 392 aaKnown RBP9.34□□□□□ -0.91
SPC25YER018C YBR220CP38318 560 aa9.34□□□□□ -0.91
SPC25YER018C ARC40P38328 384 aaKnown RBP9.34□□□□□ -0.91
SPC25YER018C YBR242WP38331 238 aa9.34□□□□□ -0.91
SPC25YER018C OST1P41543 476 aaKnown RBP9.34□□□□□ -0.91
SPC25YER018C YIP5P53108 310 aa9.34□□□□□ -0.91
SPC25YER018C NSA1P53136 463 aaPredicted RBP9.34□□□□□ -0.91
SPC25YER018C GIM3P53900 129 aa9.34□□□□□ -0.91
SPC25YER018C SPR28Q04921 423 aa9.34□□□□□ -0.91
SPC25YER018C TDH2P00358 332 aaKnown RBP9.33□□□□□ -0.92
SPC25YER018C RPL3P14126 387 aaKnown RBP9.33□□□□□ -0.92
SPC25YER018C RNA14P25298 677 aaKnown RBP9.33□□□□□ -0.92
SPC25YER018C REC114P32841 428 aa9.33□□□□□ -0.92
SPC25YER018C VAM7P32912 316 aa9.33□□□□□ -0.92
SPC25YER018C YIL029CP40538 142 aa9.33□□□□□ -0.92
SPC25YER018C YNL092WP53934 400 aa9.33□□□□□ -0.92
SPC25YER018C TY1A-DR2Q03964 440 aaKnown RBP9.33□□□□□ -0.92
SPC25YER018C RDI1Q12434 202 aa9.33□□□□□ -0.92
SPC25YER018C CDC28P00546 298 aaKnown RBP9.32□□□□□ -0.92
SPC25YER018C REP2P03872 296 aa9.32□□□□□ -0.92
SPC25YER018C MET3P08536 511 aa9.32□□□□□ -0.92
SPC25YER018C CDC23P16522 626 aa9.32□□□□□ -0.92
SPC25YER018C RFA3P26755 122 aaKnown RBP9.32□□□□□ -0.92
SPC25YER018C MSS1P32559 526 aaPredicted RBP9.32□□□□□ -0.92
SPC25YER018C YMR144WP40214 342 aaKnown RBP9.32□□□□□ -0.92
SPC25YER018C GNA1P43577 159 aaPredicted RBP9.32□□□□□ -0.92
SPC25YER018C DIE2P50076 525 aa9.32□□□□□ -0.92
SPC25YER018C UFD1P53044 361 aa9.32□□□□□ -0.92
SPC25YER018C RSM27P53305 110 aa9.32□□□□□ -0.92
SPC25YER018C MRPL13Q02204 264 aa9.32□□□□□ -0.92
SPC25YER018C API2Q04413 109 aa9.32□□□□□ -0.92
SPC25YER018C YPR098CQ06089 161 aa9.32□□□□□ -0.92
SPC25YER018C MRL1Q06815 381 aa9.32□□□□□ -0.92
SPC25YER018C ENV7Q12003 364 aa9.32□□□□□ -0.92
SPC25YER018C SCM3Q12334 223 aa9.32□□□□□ -0.92
SPC25YER018C HUT1Q12520 339 aa9.32□□□□□ -0.92
SPC25YER018C RPL25P04456 142 aaKnown RBP9.31□□□□□ -0.92
SPC25YER018C RAD52P06778 471 aaKnown RBP9.31□□□□□ -0.92
SPC25YER018C SAG1P20840 650 aa9.31□□□□□ -0.92
SPC25YER018C MRPL3P36516 390 aa9.31□□□□□ -0.92
SPC25YER018C YER079WP40052 210 aaKnown RBP9.31□□□□□ -0.92
SPC25YER018C TYW3P53177 273 aa9.31□□□□□ -0.92
SPC25YER018C CRZ1P53968 678 aa9.31□□□□□ -0.92
SPC25YER018C ARG5,6Q01217 863 aa9.31□□□□□ -0.92
SPC25YER018C DLT1Q04216 342 aa9.31□□□□□ -0.92
SPC25YER018C YPR196WQ06595 470 aa9.31□□□□□ -0.92
SPC25YER018C EAF3Q12432 401 aa9.31□□□□□ -0.92
SPC25YER018C FSH3Q99369 266 aa9.31□□□□□ -0.92
SPC25YER018C PRP8P33334 2413 aaKnown RBP9.31□□□□□ -0.92
SPC25YER018C SPS100P13130 326 aa9.3□□□□□ -0.92
SPC25YER018C GCN3P14741 305 aa9.3□□□□□ -0.92
SPC25YER018C ATG22P25568 528 aa9.3□□□□□ -0.92
SPC25YER018C BUD23P25627 275 aaPredicted RBP9.3□□□□□ -0.92
SPC25YER018C PRS3P38689 320 aaKnown RBP9.3□□□□□ -0.92
SPC25YER018C SSN8P47821 323 aa9.3□□□□□ -0.92
SPC25YER018C YDC1Q02896 317 aa9.3□□□□□ -0.92
SPC25YER018C SSA3P09435 649 aaKnown RBP9.29□□□□□ -0.92
SPC25YER018C NAT2P37293 288 aa9.29□□□□□ -0.92
SPC25YER018C FAT1P38225 669 aa9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms