RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	PET191	Q02772	108 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	YML122C	Q03207	126 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	SNX41	Q04053	625 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	HLR1	Q04429	423 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	VBA4	Q04602	768 aa	Known RBP	2.98	□□□□□ -1.93
PSF1	YDR013W	YML053C	Q04978	212 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	KEI1	Q06346	221 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	ANT1	Q06497	328 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	BSC6	Q08280	497 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	SCP1	Q08873	200 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	MCP1	Q12106	302 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	RLM1	Q12224	676 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	YRM1	Q12340	786 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	ORT1	Q12375	292 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	PET20	Q99373	253 aa		2.98	□□□□□ -1.93
PSF1	YDR013W	STT4	P37297	1900 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	YMR084W	A2P2R3	262 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	FUR4	P05316	633 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	YFR010W-A	P0C5N0	62 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	YHR214C-D	P0CX93	97 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	GLK1	P17709	500 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	MXR2	P25566	168 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	LDS1	P31379	325 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	PMT2	P31382	759 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	VMA5	P31412	392 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	PPG1	P32838	368 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	MSN4	P33749	630 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	RPS27A	P35997	82 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	COS9	P36034	407 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	YBR197C	P38306	217 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	MGE1	P38523	228 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	RPS27B	P38711	82 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	LNP1	P38878	278 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	ASP1	P38986	381 aa	Predicted RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	NOP16	P40007	231 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	RPL13B	P40212	199 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	PGD1	P40356	397 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	YIL067C	P40514	678 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	YPS6	P40583	537 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	REE1	P40893	198 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	SNO3	P43544	222 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	OTU1	P43558	301 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	YJR111C	P47148	283 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	BUL1	P48524	976 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	UBP8	P50102	471 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	PHO23	P50947	330 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	MPA43	P53583	542 aa	Predicted RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	SUN4	P53616	420 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	CAF40	P53829	373 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	RSM23	Q01163	450 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	SRP1	Q02821	542 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	YDR415C	Q04033	374 aa	Predicted RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	MIX14	Q04341	121 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	STP3	Q05937	343 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	MRPL35	Q06678	367 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	YFH1	Q07540	174 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	RRT7	Q07829	113 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	RDL2	Q08742	149 aa	Known RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	SNU23	Q12368	194 aa	Predicted RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	RPL13A	Q12690	199 aa	Predicted RBP	2.97	□□□□□ -1.93
PSF1	YDR013W	PCC1	Q3E833	88 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	UBA3	Q99344	299 aa		2.97	□□□□□ -1.93
PSF1	YDR013W	IPP1	P00817	287 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	TPI1	P00942	248 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	SCEI	P03882	235 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	RPL25	P04456	142 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	CDC36	P06100	191 aa	Predicted RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	SPS4	P09937	338 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	MATALPHA1	P0CY06	175 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	HMLALPHA1	P0CY07	175 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	RPL3	P14126	387 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	CKA1	P15790	372 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	RPB8	P20436	146 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	CKS1	P20486	150 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	ERG4	P25340	473 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	MSK1	P32048	576 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
PSF1	YDR013W	SHM2	P37291	469 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	RRP4	P38792	359 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	GEP4	P38812	185 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	YER010C	P40011	234 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	CFD1	P40558	293 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	RTS2	P40962	232 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	GLR1	P41921	483 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	YGL159W	P53110	370 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	YGL117W	P53133	265 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	YGR126W	P53274	230 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	OKP1	P53298	406 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	YNR048W	P53740	393 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	RHO5	P53879	331 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	RNH201	P53942	307 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	GPI15	P53961	229 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	BUD25	P85052	153 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	YPL039W	Q03080	316 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	MRPS17	Q03246	237 aa	Predicted RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	NUP53	Q03790	475 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	YDR102C	Q03864	110 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	TSA2	Q04120	196 aa		2.96	□□□□□ -1.94
PSF1	YDR013W	ERP1	Q05359	219 aa	Known RBP	2.96	□□□□□ -1.94
PSF1	YDR013W	PAL1	Q05518	499 aa	Known RBP	2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms