RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	COS3	P0CX13	379 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	RPL23A	P0CX41	137 aa	Known RBP	4.28	□□□□□ -1.72
ECM1	YAL059W	RPL23B	P0CX42	137 aa	Known RBP	4.28	□□□□□ -1.72
ECM1	YAL059W	BUB2	P26448	306 aa	Predicted RBP	4.28	□□□□□ -1.72
ECM1	YAL059W	PET8	P38921	284 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	PDS1	P40316	373 aa	Predicted RBP	4.28	□□□□□ -1.72
ECM1	YAL059W	FMP32	P43557	207 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	SEI1	Q06058	285 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	YLR030W	Q07967	263 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	YOL024W	Q08172	172 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	YGK3	Q12222	375 aa	Predicted RBP	4.28	□□□□□ -1.72
ECM1	YAL059W	EAF3	Q12432	401 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	PEX11	Q12462	236 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	MDS3	P53094	1487 aa		4.28	□□□□□ -1.72
ECM1	YAL059W	SWI1	P09547	1314 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	CMD1	P06787	147 aa	Known RBP	4.27	□□□□□ -1.73
ECM1	YAL059W	MET2	P08465	486 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	YKR104W	P0CE69	306 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	SRY1	P36007	326 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	MRPL39	P36533	70 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
ECM1	YAL059W	PEX22	P39718	180 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	PHB1	P40961	287 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	AZF1	P41696	914 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	MEP2	P41948	499 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	MOB2	P43563	287 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	RRT5	P43607	289 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	SYF2	P53277	215 aa	Predicted RBP	4.27	□□□□□ -1.73
ECM1	YAL059W	MPA43	P53583	542 aa	Predicted RBP	4.27	□□□□□ -1.73
ECM1	YAL059W	NRM1	P53718	249 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	PIR3	Q03180	325 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	UTP15	Q04305	513 aa	Known RBP	4.27	□□□□□ -1.73
ECM1	YAL059W	YLR281C	Q05863	155 aa		4.27	□□□□□ -1.73
ECM1	YAL059W	RPO41	P13433	1351 aa	Known RBP	4.27	□□□□□ -1.73
ECM1	YAL059W	CDC8	P00572	216 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	HEM4	P06174	275 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	RPL4A	P10664	362 aa	Known RBP	4.26	□□□□□ -1.73
ECM1	YAL059W	GRX2	P17695	143 aa	Known RBP	4.26	□□□□□ -1.73
ECM1	YAL059W	MRPL20	P22354	195 aa	Predicted RBP	4.26	□□□□□ -1.73
ECM1	YAL059W	OAC1	P32332	324 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	AEP1	P32493	518 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	HEM14	P40012	539 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	RPL4B	P49626	362 aa	Known RBP	4.26	□□□□□ -1.73
ECM1	YAL059W	TOS8	P53147	276 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	SHY1	P53266	389 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	SUR7	P54003	302 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	YMR254C	Q04838	102 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	RRP40	Q08285	240 aa	Known RBP	4.26	□□□□□ -1.73
ECM1	YAL059W	YDL199C	Q12407	687 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	EFG1	Q3E705	233 aa	Known RBP	4.26	□□□□□ -1.73
ECM1	YAL059W	YLR361C-A	Q3E795	98 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	MHP1	P43638	1398 aa		4.26	□□□□□ -1.73
ECM1	YAL059W	RPS14A	P06367	137 aa	Known RBP	4.25	□□□□□ -1.73
ECM1	YAL059W	MRS1	P07266	363 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	AAT2	P23542	418 aa	Known RBP	4.25	□□□□□ -1.73
ECM1	YAL059W	YCR023C	P25351	611 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	SIP2	P34164	415 aa	Known RBP	4.25	□□□□□ -1.73
ECM1	YAL059W	YBR062C	P38239	180 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	RPS14B	P39516	138 aa	Known RBP	4.25	□□□□□ -1.73
ECM1	YAL059W	YND1	P40009	630 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	APS3	P47064	194 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	CCC1	P47818	322 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	HNT1	Q04344	158 aa	Known RBP	4.25	□□□□□ -1.73
ECM1	YAL059W	FMP42	Q04991	504 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	MDM32	Q12171	622 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	HRT3	Q12347	344 aa		4.25	□□□□□ -1.73
ECM1	YAL059W	YMR316C-A	I2HB70	103 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	EPT1	P22140	391 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	YBR137W	P38276	179 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	ECM14	P38836	430 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	SPL2	P38839	148 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	LSM4	P40070	187 aa	Known RBP	4.24	□□□□□ -1.73
ECM1	YAL059W	YER137C	P40083	148 aa	Known RBP	4.24	□□□□□ -1.73
ECM1	YAL059W	RRG9	P40156	214 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	PAN6	P40459	309 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	OST1	P41543	476 aa	Known RBP	4.24	□□□□□ -1.73
ECM1	YAL059W	LCB3	P47013	409 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	DYN2	Q02647	92 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	YDR476C	Q03362	224 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	LIP2	Q06005	328 aa		4.24	□□□□□ -1.73
ECM1	YAL059W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.24	□□□□□ -1.73
ECM1	YAL059W	RPS18A	P0CX55	146 aa	Known RBP	4.23	□□□□□ -1.73
ECM1	YAL059W	RPS18B	P0CX56	146 aa	Predicted RBP	4.23	□□□□□ -1.73
ECM1	YAL059W	YCR022C	P25620	114 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	ARO7	P32178	256 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	PRY2	P36110	329 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	RCK1	P38622	512 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	MAM33	P40513	266 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	UFE1	P41834	346 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	IKS1	P47042	667 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	AIM25	P47140	327 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	IMP4	P53941	290 aa	Known RBP	4.23	□□□□□ -1.73
ECM1	YAL059W	PKR1	Q03880	122 aa	Known RBP	4.23	□□□□□ -1.73
ECM1	YAL059W	YDR415C	Q04033	374 aa	Predicted RBP	4.23	□□□□□ -1.73
ECM1	YAL059W	RAX2	Q12465	1220 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	CSR2	Q12734	1121 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	Q0144	Q9ZZW2	109 aa		4.23	□□□□□ -1.73
ECM1	YAL059W	STE7	P06784	515 aa		4.22	□□□□□ -1.73
ECM1	YAL059W	MIR1	P23641	311 aa	Known RBP	4.22	□□□□□ -1.73
ECM1	YAL059W	SCO1	P23833	295 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms