RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C KRE29P40026 464 aa2.84□□□□□ -1.96
LCB4YOR171C RFC2P40348 353 aa2.84□□□□□ -1.96
LCB4YOR171C YFL040WP43562 540 aa2.84□□□□□ -1.96
LCB4YOR171C YJR012CP47087 207 aa2.84□□□□□ -1.96
LCB4YOR171C VPS25P47142 202 aa2.84□□□□□ -1.96
LCB4YOR171C OST3P48439 350 aa2.84□□□□□ -1.96
LCB4YOR171C RBL2P48606 106 aaKnown RBP2.84□□□□□ -1.96
LCB4YOR171C YIF1P53845 314 aaKnown RBP2.84□□□□□ -1.96
LCB4YOR171C YLR152CP54072 576 aa2.84□□□□□ -1.96
LCB4YOR171C MAK3Q03503 176 aa2.84□□□□□ -1.96
LCB4YOR171C YDR249CQ03787 373 aa2.84□□□□□ -1.96
LCB4YOR171C SDH7Q04401 133 aa2.84□□□□□ -1.96
LCB4YOR171C PRP11Q07350 266 aaPredicted RBP2.84□□□□□ -1.96
LCB4YOR171C IMA2Q08295 589 aa2.84□□□□□ -1.96
LCB4YOR171C YOR214CQ12282 236 aa2.84□□□□□ -1.96
LCB4YOR171C YOP1Q12402 180 aa2.84□□□□□ -1.96
LCB4YOR171C SIR4P11978 1358 aa2.83□□□□□ -1.96
LCB4YOR171C EDE1P34216 1381 aa2.83□□□□□ -1.96
LCB4YOR171C TRM732Q03496 1420 aa2.83□□□□□ -1.96
LCB4YOR171C TPI1P00942 248 aaKnown RBP2.83□□□□□ -1.96
LCB4YOR171C CDC7P06243 507 aa2.83□□□□□ -1.96
LCB4YOR171C MET2P08465 486 aa2.83□□□□□ -1.96
LCB4YOR171C RPL31AP0C2H8 113 aaKnown RBP2.83□□□□□ -1.96
LCB4YOR171C YOL163WP0CF20 169 aa2.83□□□□□ -1.96
LCB4YOR171C SAM2P19358 384 aaKnown RBP2.83□□□□□ -1.96
LCB4YOR171C LHP1P33399 275 aaKnown RBP2.83□□□□□ -1.96
LCB4YOR171C MTR2P34232 184 aaKnown RBP2.83□□□□□ -1.96
LCB4YOR171C MRPL24P36525 258 aaPredicted RBP2.83□□□□□ -1.96
LCB4YOR171C MRPL28P36527 147 aa2.83□□□□□ -1.96
LCB4YOR171C IST2P38250 946 aa2.83□□□□□ -1.96
LCB4YOR171C SLM6P38343 150 aa2.83□□□□□ -1.96
LCB4YOR171C RCK1P38622 512 aa2.83□□□□□ -1.96
LCB4YOR171C LSM12P38828 187 aaKnown RBP2.83□□□□□ -1.96
LCB4YOR171C PDS1P40316 373 aaPredicted RBP2.83□□□□□ -1.96
LCB4YOR171C MAM33P40513 266 aa2.83□□□□□ -1.96
LCB4YOR171C YIL060WP40519 144 aa2.83□□□□□ -1.96
LCB4YOR171C AZF1P41696 914 aa2.83□□□□□ -1.96
LCB4YOR171C YCH1P42937 148 aa2.83□□□□□ -1.96
LCB4YOR171C BIR1P47134 954 aa2.83□□□□□ -1.96
LCB4YOR171C TRM9P49957 279 aa2.83□□□□□ -1.96
LCB4YOR171C TOS2P50078 622 aa2.83□□□□□ -1.96
LCB4YOR171C YGR017WP53210 297 aa2.83□□□□□ -1.96
LCB4YOR171C MAL13P53338 473 aa2.83□□□□□ -1.96
LCB4YOR171C YMR010WQ03687 405 aa2.83□□□□□ -1.96
LCB4YOR171C ZEO1Q08245 113 aa2.83□□□□□ -1.96
LCB4YOR171C SKI7Q08491 747 aaPredicted RBP2.83□□□□□ -1.96
LCB4YOR171C YDL199CQ12407 687 aa2.83□□□□□ -1.96
LCB4YOR171C RAX2Q12465 1220 aa2.83□□□□□ -1.96
LCB4YOR171C PDR18P53756 1333 aa2.83□□□□□ -1.96
LCB4YOR171C CYC3P06182 269 aa2.82□□□□□ -1.96
LCB4YOR171C RPL42AP0CX27 106 aaKnown RBP2.82□□□□□ -1.96
LCB4YOR171C RPL42BP0CX28 106 aaKnown RBP2.82□□□□□ -1.96
LCB4YOR171C ERD1P16151 362 aa2.82□□□□□ -1.96
LCB4YOR171C PPH21P23594 369 aa2.82□□□□□ -1.96
LCB4YOR171C SCO1P23833 295 aa2.82□□□□□ -1.96
LCB4YOR171C CNB1P25296 175 aa2.82□□□□□ -1.96
LCB4YOR171C TRX3P25372 127 aa2.82□□□□□ -1.96
LCB4YOR171C ARO7P32178 256 aa2.82□□□□□ -1.96
LCB4YOR171C YAL037WP39728 267 aa2.82□□□□□ -1.96
LCB4YOR171C YMR144WP40214 342 aaKnown RBP2.82□□□□□ -1.96
LCB4YOR171C YIL067CP40514 678 aa2.82□□□□□ -1.96
LCB4YOR171C LST7P53237 242 aa2.82□□□□□ -1.96
LCB4YOR171C PDR17P53844 350 aa2.82□□□□□ -1.96
LCB4YOR171C ASI3P53983 676 aa2.82□□□□□ -1.96
LCB4YOR171C YMR166CQ03829 368 aa2.82□□□□□ -1.96
LCB4YOR171C HNT1Q04344 158 aaKnown RBP2.82□□□□□ -1.96
LCB4YOR171C YMR253CQ04835 414 aa2.82□□□□□ -1.96
LCB4YOR171C ATX2Q12067 313 aa2.82□□□□□ -1.96
LCB4YOR171C SNU23Q12368 194 aaPredicted RBP2.82□□□□□ -1.96
LCB4YOR171C BCY1P07278 416 aaKnown RBP2.82□□□□□ -1.96
LCB4YOR171C DDI2P0CH63 225 aa2.82□□□□□ -1.96
LCB4YOR171C DDI3P0CH64 225 aa2.82□□□□□ -1.96
LCB4YOR171C FCY2P17064 533 aa2.82□□□□□ -1.96
LCB4YOR171C PHO13P19881 312 aa2.82□□□□□ -1.96
LCB4YOR171C MRPS28P21771 286 aa2.82□□□□□ -1.96
LCB4YOR171C FUN19P28003 413 aaPredicted RBP2.82□□□□□ -1.96
LCB4YOR171C PHA2P32452 334 aa2.82□□□□□ -1.96
LCB4YOR171C HYM1P32464 399 aa2.82□□□□□ -1.96
LCB4YOR171C TOA2P32774 122 aa2.82□□□□□ -1.96
LCB4YOR171C YKL097CP34245 136 aa2.82□□□□□ -1.96
LCB4YOR171C ASK1P35734 292 aa2.82□□□□□ -1.96
LCB4YOR171C YBR096WP38256 230 aa2.82□□□□□ -1.96
LCB4YOR171C YHR035WP38769 630 aa2.82□□□□□ -1.96
LCB4YOR171C AIM2P39721 246 aa2.82□□□□□ -1.96
LCB4YOR171C FAR7P43592 221 aa2.82□□□□□ -1.96
LCB4YOR171C TPN1P53099 579 aa2.82□□□□□ -1.96
LCB4YOR171C SWC4P53201 476 aa2.82□□□□□ -1.96
LCB4YOR171C NHP10Q03435 203 aa2.82□□□□□ -1.96
LCB4YOR171C TDA1Q03533 586 aa2.82□□□□□ -1.96
LCB4YOR171C YDR387CQ04162 555 aa2.82□□□□□ -1.96
LCB4YOR171C YMR034CQ05131 434 aaPredicted RBP2.82□□□□□ -1.96
LCB4YOR171C YOL024WQ08172 172 aa2.82□□□□□ -1.96
LCB4YOR171C SRL2Q12020 392 aa2.82□□□□□ -1.96
LCB4YOR171C YLL056CQ12177 298 aa2.82□□□□□ -1.96
LCB4YOR171C SME1Q12330 94 aaPredicted RBP2.82□□□□□ -1.96
LCB4YOR171C PEX11Q12462 236 aa2.82□□□□□ -1.96
LCB4YOR171C CMD1P06787 147 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C MTF1P14908 341 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C EXG1P23776 448 aaKnown RBP2.81□□□□□ -1.96
LCB4YOR171C MKK1P32490 508 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms