RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C MRPL39P36533 70 aa5.53□□□□□ -1.52
TSR3YOR006C SRO77P38163 1010 aa5.53□□□□□ -1.52
TSR3YOR006C RPS20P38701 121 aaKnown RBP5.53□□□□□ -1.52
TSR3YOR006C SSO2P39926 295 aa5.53□□□□□ -1.52
TSR3YOR006C SPO73P40031 143 aa5.53□□□□□ -1.52
TSR3YOR006C RFC4P40339 323 aaKnown RBP5.53□□□□□ -1.52
TSR3YOR006C POP1P41812 875 aa5.53□□□□□ -1.52
TSR3YOR006C MPP6P53725 186 aaPredicted RBP5.53□□□□□ -1.52
TSR3YOR006C COS1P53822 381 aa5.53□□□□□ -1.52
TSR3YOR006C SCS7Q03529 384 aa5.53□□□□□ -1.52
TSR3YOR006C SNO4Q04902 237 aa5.53□□□□□ -1.52
TSR3YOR006C YMR226CQ05016 267 aaKnown RBP5.53□□□□□ -1.52
TSR3YOR006C RAF1Q06891 181 aa5.53□□□□□ -1.52
TSR3YOR006C YDL114WQ07530 308 aa5.53□□□□□ -1.52
TSR3YOR006C DTD1Q07648 150 aaKnown RBP5.53□□□□□ -1.52
TSR3YOR006C AIM6Q07716 390 aa5.53□□□□□ -1.52
TSR3YOR006C HSP33Q08914 237 aaKnown RBP5.53□□□□□ -1.52
TSR3YOR006C GRE1Q08969 168 aa5.53□□□□□ -1.52
TSR3YOR006C HSP32Q08992 237 aa5.53□□□□□ -1.52
TSR3YOR006C FRE6Q12473 712 aa5.53□□□□□ -1.52
TSR3YOR006C YDL007C-AQ2V2Q0 85 aa5.53□□□□□ -1.52
TSR3YOR006C MHF1Q3E835 90 aa5.53□□□□□ -1.52
TSR3YOR006C RHO1P06780 209 aaKnown RBP5.52□□□□□ -1.53
TSR3YOR006C CAR2P07991 424 aaKnown RBP5.52□□□□□ -1.53
TSR3YOR006C YAK1P14680 807 aa5.52□□□□□ -1.53
TSR3YOR006C MRPS28P21771 286 aa5.52□□□□□ -1.53
TSR3YOR006C MRPL6P32904 214 aa5.52□□□□□ -1.53
TSR3YOR006C ALP1P38971 573 aa5.52□□□□□ -1.53
TSR3YOR006C KRE29P40026 464 aa5.52□□□□□ -1.53
TSR3YOR006C HIS6P40545 261 aa5.52□□□□□ -1.53
TSR3YOR006C IRC7P43623 340 aa5.52□□□□□ -1.53
TSR3YOR006C ILM1P47155 203 aa5.52□□□□□ -1.53
TSR3YOR006C YGL101WP53144 215 aa5.52□□□□□ -1.53
TSR3YOR006C MNT4P53745 580 aa5.52□□□□□ -1.53
TSR3YOR006C ABZ2Q03266 374 aa5.52□□□□□ -1.53
TSR3YOR006C GIM5Q04493 163 aa5.52□□□□□ -1.53
TSR3YOR006C YPR147CQ06522 304 aaKnown RBP5.52□□□□□ -1.53
TSR3YOR006C NIP7Q08962 181 aaKnown RBP5.52□□□□□ -1.53
TSR3YOR006C SPC3Q12133 184 aa5.52□□□□□ -1.53
TSR3YOR006C YLR126CQ12288 251 aa5.52□□□□□ -1.53
TSR3YOR006C YDL180WQ12301 547 aa5.52□□□□□ -1.53
TSR3YOR006C YOR343CQ12484 108 aa5.52□□□□□ -1.53
TSR3YOR006C HIS3P06633 220 aa5.51□□□□□ -1.53
TSR3YOR006C DPM1P14020 267 aaKnown RBP5.51□□□□□ -1.53
TSR3YOR006C SNF6P18888 332 aa5.51□□□□□ -1.53
TSR3YOR006C RPB8P20436 146 aa5.51□□□□□ -1.53
TSR3YOR006C BOS1P25385 244 aa5.51□□□□□ -1.53
TSR3YOR006C COS9P36034 407 aa5.51□□□□□ -1.53
TSR3YOR006C ARO9P38840 513 aaPredicted RBP5.51□□□□□ -1.53
TSR3YOR006C PTH1P38876 190 aaKnown RBP5.51□□□□□ -1.53
TSR3YOR006C EGD2P38879 174 aaKnown RBP5.51□□□□□ -1.53
TSR3YOR006C YER137CP40083 148 aaKnown RBP5.51□□□□□ -1.53
TSR3YOR006C QRI7P43122 407 aa5.51□□□□□ -1.53
TSR3YOR006C MRPL1Q04599 285 aa5.51□□□□□ -1.53
TSR3YOR006C YDL242WQ07746 117 aa5.51□□□□□ -1.53
TSR3YOR006C UIP4Q08926 304 aa5.51□□□□□ -1.53
TSR3YOR006C SET6Q12529 373 aa5.51□□□□□ -1.53
TSR3YOR006C FOL3Q12676 427 aaPredicted RBP5.51□□□□□ -1.53
TSR3YOR006C RIB3Q99258 208 aa5.51□□□□□ -1.53
TSR3YOR006C HEM4P06174 275 aa5.5□□□□□ -1.53
TSR3YOR006C DSF1P0CX08 502 aa5.5□□□□□ -1.53
TSR3YOR006C YNR073CP0CX09 502 aa5.5□□□□□ -1.53
TSR3YOR006C SPO7P18410 259 aa5.5□□□□□ -1.53
TSR3YOR006C DBF2P22204 572 aa5.5□□□□□ -1.53
TSR3YOR006C SOF1P33750 489 aaKnown RBP5.5□□□□□ -1.53
TSR3YOR006C AST1P35183 429 aa5.5□□□□□ -1.53
TSR3YOR006C SLM4P38247 162 aa5.5□□□□□ -1.53
TSR3YOR006C SBE22P38814 852 aa5.5□□□□□ -1.53
TSR3YOR006C SEN34P39707 275 aa5.5□□□□□ -1.53
TSR3YOR006C SNL1P40548 159 aa5.5□□□□□ -1.53
TSR3YOR006C IDP2P41939 412 aa5.5□□□□□ -1.53
TSR3YOR006C LSM1P47017 172 aaKnown RBP5.5□□□□□ -1.53
TSR3YOR006C ADO1P47143 340 aaKnown RBP5.5□□□□□ -1.53
TSR3YOR006C BRR6P53062 197 aa5.5□□□□□ -1.53
TSR3YOR006C ORM1P53224 222 aa5.5□□□□□ -1.53
TSR3YOR006C SSU72P53538 206 aaPredicted RBP5.5□□□□□ -1.53
TSR3YOR006C YPL108WQ02872 168 aaPredicted RBP5.5□□□□□ -1.53
TSR3YOR006C ECM18Q04623 453 aa5.5□□□□□ -1.53
TSR3YOR006C GTO3Q04806 366 aa5.5□□□□□ -1.53
TSR3YOR006C YBR255C-AQ3E776 120 aa5.5□□□□□ -1.53
TSR3YOR006C PRB1P09232 635 aa5.49□□□□□ -1.53
TSR3YOR006C ATR1P13090 542 aa5.49□□□□□ -1.53
TSR3YOR006C URE2P23202 354 aaKnown RBP5.49□□□□□ -1.53
TSR3YOR006C STE50P25344 346 aa5.49□□□□□ -1.53
TSR3YOR006C CAM1P29547 415 aaKnown RBP5.49□□□□□ -1.53
TSR3YOR006C MDH3P32419 343 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
TSR3YOR006C SUA5P32579 426 aa5.49□□□□□ -1.53
TSR3YOR006C CYS4P32582 507 aaKnown RBP5.49□□□□□ -1.53
TSR3YOR006C YMR144WP40214 342 aaKnown RBP5.49□□□□□ -1.53
TSR3YOR006C MSS2P40990 351 aa5.49□□□□□ -1.53
TSR3YOR006C PLP1Q04004 230 aa5.49□□□□□ -1.53
TSR3YOR006C NDE2Q07500 545 aa5.49□□□□□ -1.53
TSR3YOR006C HRT1Q08273 121 aa5.49□□□□□ -1.53
TSR3YOR006C MED2Q12124 431 aa5.49□□□□□ -1.53
TSR3YOR006C ATP16Q12165 160 aa5.49□□□□□ -1.53
TSR3YOR006C TFS1P14306 219 aa5.48□□□□□ -1.53
TSR3YOR006C CKA1P15790 372 aa5.48□□□□□ -1.53
TSR3YOR006C YCL042WP25572 119 aa5.48□□□□□ -1.53
TSR3YOR006C SIP1P32578 815 aa5.48□□□□□ -1.53
TSR3YOR006C PAD1P33751 242 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms