RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W SSK1Q07084 712 aa5.23□□□□□ -1.57
PRE3YJL001W MCT1Q12283 360 aa5.23□□□□□ -1.57
PRE3YJL001W YCL048W-AQ2V2Q2 79 aa5.23□□□□□ -1.57
PRE3YJL001W ATP7P30902 174 aa5.22□□□□□ -1.57
PRE3YJL001W VPH2P32341 215 aa5.22□□□□□ -1.57
PRE3YJL001W GLC7P32598 312 aaKnown RBP5.22□□□□□ -1.57
PRE3YJL001W GDH2P33327 1092 aaKnown RBP5.22□□□□□ -1.57
PRE3YJL001W YBR063CP38083 404 aa5.22□□□□□ -1.57
PRE3YJL001W YBR096WP38256 230 aa5.22□□□□□ -1.57
PRE3YJL001W YFL015CP43578 164 aa5.22□□□□□ -1.57
PRE3YJL001W YHC3P47040 408 aa5.22□□□□□ -1.57
PRE3YJL001W RPL6BP05739 176 aaKnown RBP5.21□□□□□ -1.58
PRE3YJL001W PEX3P28795 441 aa5.21□□□□□ -1.58
PRE3YJL001W HEK2P38199 381 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
PRE3YJL001W PFS2P42841 465 aaKnown RBP5.21□□□□□ -1.58
PRE3YJL001W BNA7Q04066 261 aa5.21□□□□□ -1.58
PRE3YJL001W GPI11Q06636 219 aa5.21□□□□□ -1.58
PRE3YJL001W MHF2Q3E829 80 aa5.21□□□□□ -1.58
PRE3YJL001W ARO3P14843 370 aaKnown RBP5.2□□□□□ -1.58
PRE3YJL001W APA2P22108 325 aa5.2□□□□□ -1.58
PRE3YJL001W LAC1P28496 418 aa5.2□□□□□ -1.58
PRE3YJL001W TOA1P32773 286 aa5.2□□□□□ -1.58
PRE3YJL001W ECM8P38246 354 aa5.2□□□□□ -1.58
PRE3YJL001W APJ1P53940 528 aa5.2□□□□□ -1.58
PRE3YJL001W YMR317WQ04893 1140 aa5.2□□□□□ -1.58
PRE3YJL001W MCH4Q08268 501 aa5.2□□□□□ -1.58
PRE3YJL001W SNX3Q08826 162 aaKnown RBP5.2□□□□□ -1.58
PRE3YJL001W RPN13O13563 156 aa5.19□□□□□ -1.58
PRE3YJL001W RPL39P04650 51 aa5.19□□□□□ -1.58
PRE3YJL001W DPM1P14020 267 aaKnown RBP5.19□□□□□ -1.58
PRE3YJL001W PCL1P24867 279 aa5.19□□□□□ -1.58
PRE3YJL001W ASF2P32448 525 aaPredicted RBP5.19□□□□□ -1.58
PRE3YJL001W VBA2P38358 474 aaKnown RBP5.19□□□□□ -1.58
PRE3YJL001W TRM5P38793 499 aa5.19□□□□□ -1.58
PRE3YJL001W CTR2P38865 189 aa5.19□□□□□ -1.58
PRE3YJL001W MLH1P38920 769 aa5.19□□□□□ -1.58
PRE3YJL001W YER184CP39961 794 aa5.19□□□□□ -1.58
PRE3YJL001W MRX1P40050 688 aa5.19□□□□□ -1.58
PRE3YJL001W SLZ1P40167 298 aa5.19□□□□□ -1.58
PRE3YJL001W FLX1P40464 311 aa5.19□□□□□ -1.58
PRE3YJL001W YJL055WP47044 245 aa5.19□□□□□ -1.58
PRE3YJL001W MDE1P47095 244 aa5.19□□□□□ -1.58
PRE3YJL001W RRN5Q02983 363 aa5.19□□□□□ -1.58
PRE3YJL001W RRS1Q08746 203 aaKnown RBP5.19□□□□□ -1.58
PRE3YJL001W SPC3Q12133 184 aa5.19□□□□□ -1.58
PRE3YJL001W ERP4Q12450 207 aa5.19□□□□□ -1.58
PRE3YJL001W TIM9O74700 87 aa5.18□□□□□ -1.58
PRE3YJL001W OPI3P05375 206 aa5.18□□□□□ -1.58
PRE3YJL001W CMK2P22517 447 aa5.18□□□□□ -1.58
PRE3YJL001W YHR035WP38769 630 aa5.18□□□□□ -1.58
PRE3YJL001W SGN1P40561 250 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
PRE3YJL001W STB1P42845 420 aa5.18□□□□□ -1.58
PRE3YJL001W DUO1P53168 247 aaKnown RBP5.18□□□□□ -1.58
PRE3YJL001W SMM1P53720 384 aaKnown RBP5.18□□□□□ -1.58
PRE3YJL001W SPR6Q01684 191 aa5.18□□□□□ -1.58
PRE3YJL001W YMR102CQ03177 834 aa5.18□□□□□ -1.58
PRE3YJL001W SPC19Q03954 165 aa5.18□□□□□ -1.58
PRE3YJL001W UIP4Q08926 304 aa5.18□□□□□ -1.58
PRE3YJL001W YLR108CQ12259 485 aa5.18□□□□□ -1.58
PRE3YJL001W YBR126W-AQ8TGU7 68 aa5.18□□□□□ -1.58
PRE3YJL001W BOS1P25385 244 aa5.17□□□□□ -1.58
PRE3YJL001W CLG1P35190 452 aa5.17□□□□□ -1.58
PRE3YJL001W SKG1P36169 355 aa5.17□□□□□ -1.58
PRE3YJL001W ICS2P38284 255 aa5.17□□□□□ -1.58
PRE3YJL001W CIN4P39110 191 aa5.17□□□□□ -1.58
PRE3YJL001W OST1P41543 476 aaKnown RBP5.17□□□□□ -1.58
PRE3YJL001W GET1P53192 235 aa5.17□□□□□ -1.58
PRE3YJL001W YGR168CP53293 376 aa5.17□□□□□ -1.58
PRE3YJL001W GPI1P53306 609 aa5.17□□□□□ -1.58
PRE3YJL001W ADH6Q04894 360 aaKnown RBP5.17□□□□□ -1.58
PRE3YJL001W SWA2Q06677 668 aa5.17□□□□□ -1.58
PRE3YJL001W NFI1Q12216 726 aa5.17□□□□□ -1.58
PRE3YJL001W MSW1P04803 379 aa5.16□□□□□ -1.58
PRE3YJL001W PDE2P06776 526 aa5.16□□□□□ -1.58
PRE3YJL001W NFT1P0CE68 1218 aa5.16□□□□□ -1.58
PRE3YJL001W DSF1P0CX08 502 aa5.16□□□□□ -1.58
PRE3YJL001W YNR073CP0CX09 502 aa5.16□□□□□ -1.58
PRE3YJL001W STE50P25344 346 aa5.16□□□□□ -1.58
PRE3YJL001W GPI8P49018 411 aa5.16□□□□□ -1.58
PRE3YJL001W MIG2P53035 382 aa5.16□□□□□ -1.58
PRE3YJL001W YNR064CP53750 290 aa5.16□□□□□ -1.58
PRE3YJL001W NUP49Q02199 472 aa5.16□□□□□ -1.58
PRE3YJL001W MSS11Q03825 758 aa5.16□□□□□ -1.58
PRE3YJL001W PEX12Q04370 399 aa5.16□□□□□ -1.58
PRE3YJL001W ASA1Q06822 443 aa5.16□□□□□ -1.58
PRE3YJL001W YBR085C-AO43137 85 aa5.15□□□□□ -1.59
PRE3YJL001W RPC40P07703 335 aaKnown RBP5.15□□□□□ -1.59
PRE3YJL001W CPR2P23285 205 aa5.15□□□□□ -1.59
PRE3YJL001W NTG1P31378 399 aa5.15□□□□□ -1.59
PRE3YJL001W GPI18P38211 433 aa5.15□□□□□ -1.59
PRE3YJL001W RTC2P38279 296 aa5.15□□□□□ -1.59
PRE3YJL001W RMD9P53140 646 aaKnown RBP5.15□□□□□ -1.59
PRE3YJL001W YGL101WP53144 215 aa5.15□□□□□ -1.59
PRE3YJL001W GEP7P53171 287 aa5.15□□□□□ -1.59
PRE3YJL001W RRN9P53437 365 aa5.15□□□□□ -1.59
PRE3YJL001W ATG26Q06321 1198 aa5.15□□□□□ -1.59
PRE3YJL001W PRP11Q07350 266 aaPredicted RBP5.15□□□□□ -1.59
PRE3YJL001W YDL114WQ07530 308 aa5.15□□□□□ -1.59
PRE3YJL001W LYS21Q12122 440 aaKnown RBP5.15□□□□□ -1.59
PRE3YJL001W COX5BP00425 151 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms