RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W TMS1Q12116 473 aa9.92□□□□□ -0.82
SIM1YIL123W YRM1Q12340 786 aa9.92□□□□□ -0.82
SIM1YIL123W TDH2P00358 332 aaKnown RBP9.91□□□□□ -0.82
SIM1YIL123W ARG80P07249 177 aa9.91□□□□□ -0.82
SIM1YIL123W URA6P15700 204 aa9.91□□□□□ -0.82
SIM1YIL123W NAM9P27929 486 aa9.91□□□□□ -0.82
SIM1YIL123W FLO10P36170 1169 aa9.91□□□□□ -0.82
SIM1YIL123W AIM3P38266 947 aaKnown RBP9.91□□□□□ -0.82
SIM1YIL123W YER137CP40083 148 aaKnown RBP9.91□□□□□ -0.82
SIM1YIL123W BXI1P48558 297 aa9.91□□□□□ -0.82
SIM1YIL123W LYS5P50113 272 aa9.91□□□□□ -0.82
SIM1YIL123W PDR16P53860 351 aaKnown RBP9.91□□□□□ -0.82
SIM1YIL123W GIM3P53900 129 aa9.91□□□□□ -0.82
SIM1YIL123W YLR352WQ06479 807 aa9.91□□□□□ -0.82
SIM1YIL123W RTR2Q12378 196 aa9.91□□□□□ -0.82
SIM1YIL123W RIP1P08067 215 aa9.9□□□□□ -0.82
SIM1YIL123W CDC34P14682 295 aa9.9□□□□□ -0.82
SIM1YIL123W MDH2P22133 377 aa9.9□□□□□ -0.82
SIM1YIL123W HXT2P23585 541 aa9.9□□□□□ -0.82
SIM1YIL123W YGR210CP42942 411 aa9.9□□□□□ -0.82
SIM1YIL123W YDR209CQ03480 137 aa9.9□□□□□ -0.82
SIM1YIL123W YMR265CQ03508 461 aaKnown RBP9.9□□□□□ -0.82
SIM1YIL123W TRM13Q12383 476 aa9.9□□□□□ -0.82
SIM1YIL123W FLO9P39712 1322 aa9.9□□□□□ -0.82
SIM1YIL123W SEN1Q00416 2231 aaKnown RBP9.9□□□□□ -0.82
SIM1YIL123W SGA1P08019 549 aa9.9□□□□□ -0.83
SIM1YIL123W YFR010W-AP0C5N0 62 aa9.9□□□□□ -0.83
SIM1YIL123W NAM2P11325 894 aa9.9□□□□□ -0.83
SIM1YIL123W YKL063CP35725 167 aa9.9□□□□□ -0.83
SIM1YIL123W MRPL27P36526 146 aaPredicted RBP9.9□□□□□ -0.83
SIM1YIL123W APD1P38281 316 aa9.9□□□□□ -0.83
SIM1YIL123W SOL3P38858 249 aa9.9□□□□□ -0.83
SIM1YIL123W SER3P40054 469 aa9.9□□□□□ -0.83
SIM1YIL123W LSM1P47017 172 aaKnown RBP9.9□□□□□ -0.83
SIM1YIL123W LOH1P47055 219 aa9.9□□□□□ -0.83
SIM1YIL123W ECM27P47144 725 aa9.9□□□□□ -0.83
SIM1YIL123W NIT3P49954 291 aa9.9□□□□□ -0.83
SIM1YIL123W PCP1P53259 346 aa9.9□□□□□ -0.83
SIM1YIL123W RSM27P53305 110 aa9.9□□□□□ -0.83
SIM1YIL123W NRK1P53915 240 aa9.9□□□□□ -0.83
SIM1YIL123W HNT1Q04344 158 aaKnown RBP9.9□□□□□ -0.83
SIM1YIL123W YLR224WQ05947 369 aa9.9□□□□□ -0.83
SIM1YIL123W PUT1P09368 476 aa9.89□□□□□ -0.83
SIM1YIL123W CKS1P20486 150 aaKnown RBP9.89□□□□□ -0.83
SIM1YIL123W ADH7P25377 361 aa9.89□□□□□ -0.83
SIM1YIL123W MRP17P28778 131 aa9.89□□□□□ -0.83
SIM1YIL123W ACB1P31787 87 aa9.89□□□□□ -0.83
SIM1YIL123W NUD1P32336 851 aa9.89□□□□□ -0.83
SIM1YIL123W SOF1P33750 489 aaKnown RBP9.89□□□□□ -0.83
SIM1YIL123W UMP1P38293 148 aa9.89□□□□□ -0.83
SIM1YIL123W LEU5P38702 357 aa9.89□□□□□ -0.83
SIM1YIL123W PHM8P40025 321 aa9.89□□□□□ -0.83
SIM1YIL123W SNX4P47057 423 aa9.89□□□□□ -0.83
SIM1YIL123W HSV2P50079 448 aaPredicted RBP9.89□□□□□ -0.83
SIM1YIL123W TYW3P53177 273 aa9.89□□□□□ -0.83
SIM1YIL123W GTF1P53260 183 aaPredicted RBP9.89□□□□□ -0.83
SIM1YIL123W SRL2Q12020 392 aa9.89□□□□□ -0.83
SIM1YIL123W BBP1Q12365 385 aa9.89□□□□□ -0.83
SIM1YIL123W YBR298C-AQ8TGK4 73 aa9.89□□□□□ -0.83
SIM1YIL123W CPR3P25719 182 aa9.88□□□□□ -0.83
SIM1YIL123W HOL1P53389 586 aa9.88□□□□□ -0.83
SIM1YIL123W ARG5,6Q01217 863 aa9.88□□□□□ -0.83
SIM1YIL123W KAP120Q02932 1032 aa9.88□□□□□ -0.83
SIM1YIL123W RSM10Q03201 203 aa9.88□□□□□ -0.83
SIM1YIL123W ISA2Q12425 185 aa9.88□□□□□ -0.83
SIM1YIL123W CDC36P06100 191 aaPredicted RBP9.87□□□□□ -0.83
SIM1YIL123W LDB16P25587 256 aa9.87□□□□□ -0.83
SIM1YIL123W YCR016WP25617 290 aaKnown RBP9.87□□□□□ -0.83
SIM1YIL123W ARO4P32449 370 aaKnown RBP9.87□□□□□ -0.83
SIM1YIL123W IDP2P41939 412 aa9.87□□□□□ -0.83
SIM1YIL123W CIN2P46670 268 aa9.87□□□□□ -0.83
SIM1YIL123W PRY1P47032 299 aa9.87□□□□□ -0.83
SIM1YIL123W PBP1P53297 722 aaKnown RBP9.87□□□□□ -0.83
SIM1YIL123W YNL165WP53891 406 aa9.87□□□□□ -0.83
SIM1YIL123W RNH201P53942 307 aa9.87□□□□□ -0.83
SIM1YIL123W MCT1Q12283 360 aa9.87□□□□□ -0.83
SIM1YIL123W MES1P00958 751 aaKnown RBP9.86□□□□□ -0.83
SIM1YIL123W PHO2P07269 559 aa9.86□□□□□ -0.83
SIM1YIL123W HNM1P19807 563 aa9.86□□□□□ -0.83
SIM1YIL123W CPR4P25334 318 aa9.86□□□□□ -0.83
SIM1YIL123W AFG1P32317 509 aa9.86□□□□□ -0.83
SIM1YIL123W MTC7P32633 139 aa9.86□□□□□ -0.83
SIM1YIL123W YBR096WP38256 230 aa9.86□□□□□ -0.83
SIM1YIL123W CTK2P46962 323 aa9.86□□□□□ -0.83
SIM1YIL123W ATG4P53867 494 aa9.86□□□□□ -0.83
SIM1YIL123W SMX3P54999 86 aaPredicted RBP9.86□□□□□ -0.83
SIM1YIL123W PRM15Q03262 622 aa9.86□□□□□ -0.83
SIM1YIL123W DIG2Q03373 323 aaKnown RBP9.86□□□□□ -0.83
SIM1YIL123W FMP16Q12497 93 aa9.86□□□□□ -0.83
SIM1YIL123W PCL1P24867 279 aa9.85□□□□□ -0.83
SIM1YIL123W PPZ2P33329 710 aa9.85□□□□□ -0.83
SIM1YIL123W VMA7P39111 118 aa9.85□□□□□ -0.83
SIM1YIL123W PHB2P50085 310 aa9.85□□□□□ -0.83
SIM1YIL123W HHT1P61830 136 aa9.85□□□□□ -0.83
SIM1YIL123W RSM23Q01163 450 aa9.85□□□□□ -0.83
SIM1YIL123W LAP3Q01532 483 aaKnown RBP RIP-Chip data9.85□□□□□ -0.83not detected
SIM1YIL123W YDR387CQ04162 555 aa9.85□□□□□ -0.83
SIM1YIL123W COX5BP00425 151 aa9.84□□□□□ -0.83
SIM1YIL123W DSF1P0CX08 502 aa9.84□□□□□ -0.83
SIM1YIL123W YNR073CP0CX09 502 aa9.84□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 82.7 ms