RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W DCS1Q06151 350 aa6.74□□□□□ -1.33
PEX28YHR150W AVO1Q08236 1176 aa6.74□□□□□ -1.33
PEX28YHR150W TFC7Q12415 435 aa6.74□□□□□ -1.33
PEX28YHR150W RRI1Q12468 440 aa6.74□□□□□ -1.33
PEX28YHR150W OPI3P05375 206 aa6.73□□□□□ -1.33
PEX28YHR150W CHO1P08456 276 aa6.73□□□□□ -1.33
PEX28YHR150W DAT1P13483 248 aaKnown RBP6.73□□□□□ -1.33
PEX28YHR150W CDC34P14682 295 aa6.73□□□□□ -1.33
PEX28YHR150W ARO3P14843 370 aaKnown RBP6.73□□□□□ -1.33
PEX28YHR150W URA6P15700 204 aa6.73□□□□□ -1.33
PEX28YHR150W YCR006CP25350 157 aa6.73□□□□□ -1.33
PEX28YHR150W PET18P25362 215 aa6.73□□□□□ -1.33
PEX28YHR150W ADH7P25377 361 aa6.73□□□□□ -1.33
PEX28YHR150W COQ2P32378 372 aa6.73□□□□□ -1.33
PEX28YHR150W BFR1P38934 470 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
PEX28YHR150W ASP1P38986 381 aaPredicted RBP6.73□□□□□ -1.33
PEX28YHR150W YIL152WP40455 235 aa6.73□□□□□ -1.33
PEX28YHR150W BXI1P48558 297 aa6.73□□□□□ -1.33
PEX28YHR150W YLR460CP54007 376 aa6.73□□□□□ -1.33
PEX28YHR150W SNP1Q00916 300 aaPredicted RBP6.73□□□□□ -1.33
PEX28YHR150W DXO1Q06349 442 aa6.73□□□□□ -1.33
PEX28YHR150W NOC4Q06512 552 aaPredicted RBP6.73□□□□□ -1.33
PEX28YHR150W PCC1Q3E833 88 aa6.73□□□□□ -1.33
PEX28YHR150W SSA3P09435 649 aaKnown RBP6.73□□□□□ -1.33
PEX28YHR150W MATALPHA1P0CY06 175 aa6.73□□□□□ -1.33
PEX28YHR150W HMLALPHA1P0CY07 175 aa6.73□□□□□ -1.33
PEX28YHR150W HNM1P19807 563 aa6.73□□□□□ -1.33
PEX28YHR150W ECM25P32525 599 aa6.73□□□□□ -1.33
PEX28YHR150W TRS65P32893 560 aa6.73□□□□□ -1.33
PEX28YHR150W SLC1P33333 303 aa6.73□□□□□ -1.33
PEX28YHR150W MRPL27P36526 146 aaPredicted RBP6.73□□□□□ -1.33
PEX28YHR150W SHR5P41912 237 aa6.73□□□□□ -1.33
PEX28YHR150W YFR054CP43622 192 aa6.73□□□□□ -1.33
PEX28YHR150W SEH1P53011 349 aaKnown RBP6.73□□□□□ -1.33
PEX28YHR150W MPP6P53725 186 aaPredicted RBP6.73□□□□□ -1.33
PEX28YHR150W YLR152CP54072 576 aa6.73□□□□□ -1.33
PEX28YHR150W EKI1Q03764 534 aa6.73□□□□□ -1.33
PEX28YHR150W YLR456WQ06199 204 aa6.73□□□□□ -1.33
PEX28YHR150W COQ10Q08058 207 aa6.73□□□□□ -1.33
PEX28YHR150W YRM1Q12340 786 aa6.73□□□□□ -1.33
PEX28YHR150W SNU23Q12368 194 aaPredicted RBP6.73□□□□□ -1.33
PEX28YHR150W PRP46Q12417 451 aaPredicted RBP6.73□□□□□ -1.33
PEX28YHR150W VMA9Q3E7B6 73 aa6.73□□□□□ -1.33
PEX28YHR150W IPP1P00817 287 aaKnown RBP6.72□□□□□ -1.33
PEX28YHR150W TPI1P00942 248 aaKnown RBP6.72□□□□□ -1.33
PEX28YHR150W ARF1P11076 181 aaKnown RBP6.72□□□□□ -1.33
PEX28YHR150W PMT2P31382 759 aa6.72□□□□□ -1.33
PEX28YHR150W SNC2P33328 115 aa6.72□□□□□ -1.33
PEX28YHR150W PPZ2P33329 710 aa6.72□□□□□ -1.33
PEX28YHR150W MSN4P33749 630 aa6.72□□□□□ -1.33
PEX28YHR150W SDH8P38345 138 aa6.72□□□□□ -1.33
PEX28YHR150W YHR180WP38868 163 aa6.72□□□□□ -1.33
PEX28YHR150W YJL193WP39542 402 aa6.72□□□□□ -1.33
PEX28YHR150W UBP8P50102 471 aa6.72□□□□□ -1.33
PEX28YHR150W YGL117WP53133 265 aa6.72□□□□□ -1.33
PEX28YHR150W MPA43P53583 542 aaPredicted RBP6.72□□□□□ -1.33
PEX28YHR150W VBA4Q04602 768 aaKnown RBP6.72□□□□□ -1.33
PEX28YHR150W SET6Q12529 373 aa6.72□□□□□ -1.33
PEX28YHR150W LDS1P31379 325 aa6.71□□□□□ -1.34
PEX28YHR150W SSH1P38353 490 aaKnown RBP6.71□□□□□ -1.34
PEX28YHR150W YHR210CP38893 341 aa6.71□□□□□ -1.34
PEX28YHR150W YIL067CP40514 678 aa6.71□□□□□ -1.34
PEX28YHR150W YIR035CP40579 254 aa6.71□□□□□ -1.34
PEX28YHR150W SNO3P43544 222 aa6.71□□□□□ -1.34
PEX28YHR150W MTM1P53320 366 aa6.71□□□□□ -1.34
PEX28YHR150W SCW4P53334 386 aaKnown RBP6.71□□□□□ -1.34
PEX28YHR150W APM1Q00776 475 aaPredicted RBP6.71□□□□□ -1.34
PEX28YHR150W SNX41Q04053 625 aa6.71□□□□□ -1.34
PEX28YHR150W MRPL1Q04599 285 aa6.71□□□□□ -1.34
PEX28YHR150W ENB1Q08299 606 aa6.71□□□□□ -1.34
PEX28YHR150W RLM1Q12224 676 aa6.71□□□□□ -1.34
PEX28YHR150W TY1A-LR4P0C2I8 440 aaKnown RBP6.7□□□□□ -1.34
PEX28YHR150W TY1A-DR6P0CX70 440 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-ER1P0CX71 440 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-LR2P0CX72 440 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-PLP0CX73 440 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-JR1P0CX74 440 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-LR3P0CX75 440 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-ML2P0CX76 440 aa6.7□□□□□ -1.34
PEX28YHR150W ZRC1P20107 442 aa6.7□□□□□ -1.34
PEX28YHR150W PPA2P28239 310 aa6.7□□□□□ -1.34
PEX28YHR150W RPD3P32561 433 aa6.7□□□□□ -1.34
PEX28YHR150W SRP102P36057 244 aaPredicted RBP6.7□□□□□ -1.34
PEX28YHR150W UTH1P36135 365 aa6.7□□□□□ -1.34
PEX28YHR150W DLS1P40366 167 aa6.7□□□□□ -1.34
PEX28YHR150W YGR026WP53217 278 aa6.7□□□□□ -1.34
PEX28YHR150W PET191Q02772 108 aa6.7□□□□□ -1.34
PEX28YHR150W CAC2Q04199 468 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-GR1Q12085 440 aa6.7□□□□□ -1.34
PEX28YHR150W MCP1Q12106 302 aa6.7□□□□□ -1.34
PEX28YHR150W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.7□□□□□ -1.34
PEX28YHR150W TY1A-OLQ92392 440 aaKnown RBP6.7□□□□□ -1.34
PEX28YHR150W PET20Q99373 253 aa6.7□□□□□ -1.34
PEX28YHR150W Q0142Q9ZZW4 58 aa6.7□□□□□ -1.34
PEX28YHR150W CYR1P08678 2026 aaKnown RBP6.7□□□□□ -1.34
PEX28YHR150W GLK1P17709 500 aaKnown RBP6.7□□□□□ -1.34
PEX28YHR150W MEK1P24719 497 aaPredicted RBP6.7□□□□□ -1.34
PEX28YHR150W FMT1P32785 401 aa6.7□□□□□ -1.34
PEX28YHR150W POP8P38208 133 aa6.7□□□□□ -1.34
PEX28YHR150W YIL024CP40543 189 aa6.7□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms