RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W VCX1Q99385 411 aa4.11□□□□□ -1.75
VPS29YHR012W FUR4P05316 633 aaKnown RBP4.1□□□□□ -1.75
VPS29YHR012W GCD1P09032 578 aaPredicted RBP4.1□□□□□ -1.75
VPS29YHR012W YGL041W-AP0C5N3 154 aa4.1□□□□□ -1.75
VPS29YHR012W ATR1P13090 542 aa4.1□□□□□ -1.75
VPS29YHR012W FUN19P28003 413 aaPredicted RBP4.1□□□□□ -1.75
VPS29YHR012W UBC8P28263 218 aa4.1□□□□□ -1.75
VPS29YHR012W DEG1P31115 442 aaKnown RBP4.1□□□□□ -1.75
VPS29YHR012W FRM2P37261 193 aa4.1□□□□□ -1.75
VPS29YHR012W RTC2P38279 296 aa4.1□□□□□ -1.75
VPS29YHR012W ARC40P38328 384 aaKnown RBP4.1□□□□□ -1.75
VPS29YHR012W AIM46P38885 310 aa4.1□□□□□ -1.75
VPS29YHR012W RRG9P40156 214 aa4.1□□□□□ -1.75
VPS29YHR012W PDS1P40316 373 aaPredicted RBP4.1□□□□□ -1.75
VPS29YHR012W SNL1P40548 159 aa4.1□□□□□ -1.75
VPS29YHR012W CIN2P46670 268 aa4.1□□□□□ -1.75
VPS29YHR012W BNA1P47096 177 aa4.1□□□□□ -1.75
VPS29YHR012W HMS2P47175 358 aa4.1□□□□□ -1.75
VPS29YHR012W CCC1P47818 322 aa4.1□□□□□ -1.75
VPS29YHR012W TYW3P53177 273 aa4.1□□□□□ -1.75
VPS29YHR012W PGA1P53896 198 aa4.1□□□□□ -1.75
VPS29YHR012W NRK1P53915 240 aa4.1□□□□□ -1.75
VPS29YHR012W SAM50P53969 484 aa4.1□□□□□ -1.75
VPS29YHR012W DLT1Q04216 342 aa4.1□□□□□ -1.75
VPS29YHR012W YMR317WQ04893 1140 aa4.1□□□□□ -1.75
VPS29YHR012W GSH2Q08220 491 aa4.1□□□□□ -1.75
VPS29YHR012W RPL39P04650 51 aa4.09□□□□□ -1.75
VPS29YHR012W SNF4P12904 322 aa4.09□□□□□ -1.75
VPS29YHR012W RPL30P14120 105 aaKnown RBP4.09□□□□□ -1.75
VPS29YHR012W PTP2P29461 750 aa4.09□□□□□ -1.75
VPS29YHR012W OAC1P32332 324 aa4.09□□□□□ -1.75
VPS29YHR012W SSE2P32590 693 aaKnown RBP4.09□□□□□ -1.75
VPS29YHR012W TMA19P35691 167 aaKnown RBP4.09□□□□□ -1.75
VPS29YHR012W ANR2P36090 516 aaPredicted RBP4.09□□□□□ -1.75
VPS29YHR012W YKR015CP36111 568 aa4.09□□□□□ -1.75
VPS29YHR012W CTR2P38865 189 aa4.09□□□□□ -1.75
VPS29YHR012W TIR3P40552 269 aa4.09□□□□□ -1.75
VPS29YHR012W OST1P41543 476 aaKnown RBP4.09□□□□□ -1.75
VPS29YHR012W SWP82P43554 623 aa4.09□□□□□ -1.75
VPS29YHR012W UFD1P53044 361 aa4.09□□□□□ -1.75
VPS29YHR012W COG5P53951 403 aa4.09□□□□□ -1.75
VPS29YHR012W HHT1P61830 136 aa4.09□□□□□ -1.75
VPS29YHR012W YPL108WQ02872 168 aaPredicted RBP4.09□□□□□ -1.75
VPS29YHR012W PRP3Q03338 469 aaPredicted RBP4.09□□□□□ -1.75
VPS29YHR012W YDR248CQ03786 193 aa4.09□□□□□ -1.75
VPS29YHR012W GAL83Q04739 417 aa4.09□□□□□ -1.75
VPS29YHR012W PIN3Q06449 215 aa4.09□□□□□ -1.75
VPS29YHR012W TPO3Q06451 622 aa4.09□□□□□ -1.75
VPS29YHR012W RRP9Q06506 573 aaKnown RBP4.09□□□□□ -1.75
VPS29YHR012W ARR2Q06597 130 aa4.09□□□□□ -1.75
VPS29YHR012W LUC7Q07508 261 aaPredicted RBP4.09□□□□□ -1.75
VPS29YHR012W RFU1Q08003 200 aa4.09□□□□□ -1.75
VPS29YHR012W YLR108CQ12259 485 aa4.09□□□□□ -1.75
VPS29YHR012W PST2Q12335 198 aaKnown RBP4.09□□□□□ -1.75
VPS29YHR012W MES1P00958 751 aaKnown RBP4.08□□□□□ -1.76
VPS29YHR012W TPK3P05986 398 aa4.08□□□□□ -1.76
VPS29YHR012W YCL002CP25565 263 aa4.08□□□□□ -1.76
VPS29YHR012W RPL5P26321 297 aaKnown RBP4.08□□□□□ -1.76
VPS29YHR012W REC114P32841 428 aa4.08□□□□□ -1.76
VPS29YHR012W ECT1P33412 323 aa4.08□□□□□ -1.76
VPS29YHR012W YOX1P34161 385 aa4.08□□□□□ -1.76
VPS29YHR012W PRY2P36110 329 aa4.08□□□□□ -1.76
VPS29YHR012W IPT1P38954 527 aa4.08□□□□□ -1.76
VPS29YHR012W PIC2P40035 300 aa4.08□□□□□ -1.76
VPS29YHR012W NTA1P40354 457 aa4.08□□□□□ -1.76
VPS29YHR012W SDP1P40479 209 aa4.08□□□□□ -1.76
VPS29YHR012W GZF3P42944 551 aaKnown RBP4.08□□□□□ -1.76
VPS29YHR012W CTK2P46962 323 aa4.08□□□□□ -1.76
VPS29YHR012W VOA1P53262 265 aa4.08□□□□□ -1.76
VPS29YHR012W YPL067CQ02754 198 aa4.08□□□□□ -1.76
VPS29YHR012W YMR254CQ04838 102 aa4.08□□□□□ -1.76
VPS29YHR012W ATG17Q06410 417 aa4.08□□□□□ -1.76
VPS29YHR012W DTD1Q07648 150 aaKnown RBP4.08□□□□□ -1.76
VPS29YHR012W SRL1Q08673 210 aa4.08□□□□□ -1.76
VPS29YHR012W FCY22Q12119 530 aa4.08□□□□□ -1.76
VPS29YHR012W YDL009CQ12210 107 aa4.08□□□□□ -1.76
VPS29YHR012W ISA2Q12425 185 aa4.08□□□□□ -1.76
VPS29YHR012W YGR161W-CQ3E744 92 aa4.08□□□□□ -1.76
VPS29YHR012W TAL1P15019 335 aaKnown RBP4.07□□□□□ -1.76
VPS29YHR012W SUA7P29055 345 aaPredicted RBP4.07□□□□□ -1.76
VPS29YHR012W ACH1P32316 526 aa4.07□□□□□ -1.76
VPS29YHR012W ICS2P38284 255 aa4.07□□□□□ -1.76
VPS29YHR012W DLS1P40366 167 aa4.07□□□□□ -1.76
VPS29YHR012W SLM1P40485 686 aa4.07□□□□□ -1.76
VPS29YHR012W XPT1P47165 209 aa4.07□□□□□ -1.76
VPS29YHR012W TAF4P50105 388 aa4.07□□□□□ -1.76
VPS29YHR012W PXR1P53335 271 aaPredicted RBP4.07□□□□□ -1.76
VPS29YHR012W BUD17P53727 317 aa4.07□□□□□ -1.76
VPS29YHR012W AAH1P53909 347 aa4.07□□□□□ -1.76
VPS29YHR012W YKR005CQ02203 525 aa4.07□□□□□ -1.76
VPS29YHR012W SNZ1Q03148 297 aa4.07□□□□□ -1.76
VPS29YHR012W ARP10Q04549 284 aa4.07□□□□□ -1.76
VPS29YHR012W YOR378WQ08902 515 aa4.07□□□□□ -1.76
VPS29YHR012W SOD2P00447 233 aa4.06□□□□□ -1.76
VPS29YHR012W SAM35P14693 329 aa4.06□□□□□ -1.76
VPS29YHR012W FAR1P21268 830 aa4.06□□□□□ -1.76
VPS29YHR012W ZUO1P32527 433 aaKnown RBP4.06□□□□□ -1.76
VPS29YHR012W TIF3P34167 436 aaKnown RBP4.06□□□□□ -1.76
VPS29YHR012W NAT2P37293 288 aa4.06□□□□□ -1.76
VPS29YHR012W TCM62P38228 572 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms