RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C EXG2P52911 562 aa4.43□□□□□ -1.7
SEC9YGR009C YHC1Q05900 231 aaKnown RBP4.43□□□□□ -1.7
SEC9YGR009C MDM30Q05930 598 aa4.43□□□□□ -1.7
SEC9YGR009C DIC1Q06143 298 aa4.43□□□□□ -1.7
SEC9YGR009C TDA6Q06466 467 aa4.43□□□□□ -1.7
SEC9YGR009C FDH1Q08911 376 aa4.43□□□□□ -1.7
SEC9YGR009C ALG6Q12001 544 aaKnown RBP4.43□□□□□ -1.7
SEC9YGR009C POM34Q12445 299 aa4.43□□□□□ -1.7
SEC9YGR009C AHA1Q12449 350 aaKnown RBP4.43□□□□□ -1.7
SEC9YGR009C TY1B-PR2P0C2J0 1756 aa4.42□□□□□ -1.7
SEC9YGR009C YLR462WO13556 202 aa4.42□□□□□ -1.7
SEC9YGR009C YCR102CP25608 368 aa4.42□□□□□ -1.7
SEC9YGR009C DCG1P32460 244 aa4.42□□□□□ -1.7
SEC9YGR009C TRS65P32893 560 aa4.42□□□□□ -1.7
SEC9YGR009C SFC1P33303 322 aa4.42□□□□□ -1.7
SEC9YGR009C YKR075CP36155 307 aa4.42□□□□□ -1.7
SEC9YGR009C YIL060WP40519 144 aa4.42□□□□□ -1.7
SEC9YGR009C NRD1P53617 575 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SEC9YGR009C BIO4P53630 237 aa4.42□□□□□ -1.7
SEC9YGR009C CRZ1P53968 678 aa4.42□□□□□ -1.7
SEC9YGR009C OSH6Q02201 448 aa4.42□□□□□ -1.7
SEC9YGR009C COQ11Q05892 277 aa4.42□□□□□ -1.7
SEC9YGR009C LIP2Q06005 328 aa4.42□□□□□ -1.7
SEC9YGR009C YDL177CQ12257 170 aa4.42□□□□□ -1.7
SEC9YGR009C YBR182C-AQ8TGU6 64 aa4.42□□□□□ -1.7
SEC9YGR009C PDR10P51533 1564 aa4.42□□□□□ -1.7
SEC9YGR009C YKR104WP0CE69 306 aa4.42□□□□□ -1.7
SEC9YGR009C SRB6P32570 121 aa4.42□□□□□ -1.7
SEC9YGR009C HES1P35843 434 aa4.42□□□□□ -1.7
SEC9YGR009C AVT5P38176 459 aa4.42□□□□□ -1.7
SEC9YGR009C YBR013CP38215 129 aa4.42□□□□□ -1.7
SEC9YGR009C QDR3P38227 689 aa4.42□□□□□ -1.7
SEC9YGR009C YHL044WP38727 235 aa4.42□□□□□ -1.7
SEC9YGR009C PHM8P40025 321 aa4.42□□□□□ -1.7
SEC9YGR009C VEL1P53058 206 aa4.42□□□□□ -1.7
SEC9YGR009C STR3P53101 465 aaKnown RBP4.42□□□□□ -1.7
SEC9YGR009C ALG13P53178 202 aa4.42□□□□□ -1.7
SEC9YGR009C YGR168CP53293 376 aa4.42□□□□□ -1.7
SEC9YGR009C SOK2P53438 785 aaPredicted RBP4.42□□□□□ -1.7
SEC9YGR009C RHO4Q00246 291 aa4.42□□□□□ -1.7
SEC9YGR009C HPT1Q04178 221 aaKnown RBP4.42□□□□□ -1.7
SEC9YGR009C PEX27Q08580 376 aa4.42□□□□□ -1.7
SEC9YGR009C FRE8Q12209 686 aa4.42□□□□□ -1.7
SEC9YGR009C COX5BP00425 151 aa4.41□□□□□ -1.7
SEC9YGR009C HIS1P00498 297 aaKnown RBP4.41□□□□□ -1.7
SEC9YGR009C RPL28P02406 149 aaKnown RBP4.41□□□□□ -1.7
SEC9YGR009C YML003WP0CF16 290 aa4.41□□□□□ -1.7
SEC9YGR009C FUN14P18411 198 aa4.41□□□□□ -1.7
SEC9YGR009C SNC2P33328 115 aa4.41□□□□□ -1.7
SEC9YGR009C PPZ2P33329 710 aa4.41□□□□□ -1.7
SEC9YGR009C NTF2P33331 125 aaKnown RBP4.41□□□□□ -1.7
SEC9YGR009C SSS1P35179 80 aa4.41□□□□□ -1.7
SEC9YGR009C EHT1P38295 451 aa4.41□□□□□ -1.7
SEC9YGR009C TSL1P38427 1098 aaKnown RBP4.41□□□□□ -1.7
SEC9YGR009C ASN1P49089 572 aaKnown RBP4.41□□□□□ -1.7
SEC9YGR009C UBC11P52492 156 aa4.41□□□□□ -1.7
SEC9YGR009C SLM2P53955 656 aa4.41□□□□□ -1.7
SEC9YGR009C LRS4Q04087 347 aaKnown RBP4.41□□□□□ -1.7
SEC9YGR009C SEC13Q04491 297 aaKnown RBP4.41□□□□□ -1.7
SEC9YGR009C HOF1Q05080 669 aa4.41□□□□□ -1.7
SEC9YGR009C ENB1Q08299 606 aa4.41□□□□□ -1.7
SEC9YGR009C SLD7Q08457 257 aa4.41□□□□□ -1.7
SEC9YGR009C IRC13Q08630 104 aa4.41□□□□□ -1.7
SEC9YGR009C YOR387CQ08910 206 aa4.41□□□□□ -1.7
SEC9YGR009C YPR202WQ08993 238 aa4.41□□□□□ -1.7
SEC9YGR009C TFC7Q12415 435 aa4.41□□□□□ -1.7
SEC9YGR009C COX3P00420 269 aa4.4□□□□□ -1.7
SEC9YGR009C CDC4P07834 779 aa4.4□□□□□ -1.7
SEC9YGR009C YER039C-AP0CD97 72 aa4.4□□□□□ -1.7
SEC9YGR009C YLL053CP0CD98 152 aa4.4□□□□□ -1.7
SEC9YGR009C LSB5P25369 354 aa4.4□□□□□ -1.7
SEC9YGR009C CDC20P26309 610 aa4.4□□□□□ -1.7
SEC9YGR009C NUP2P32499 720 aa4.4□□□□□ -1.7
SEC9YGR009C SPS18P32572 300 aa4.4□□□□□ -1.7
SEC9YGR009C PTM1P32857 523 aa4.4□□□□□ -1.7
SEC9YGR009C SFK1P35735 353 aa4.4□□□□□ -1.7
SEC9YGR009C PNT1P38969 423 aa4.4□□□□□ -1.7
SEC9YGR009C GLE2P40066 365 aa4.4□□□□□ -1.7
SEC9YGR009C TIR3P40552 269 aa4.4□□□□□ -1.7
SEC9YGR009C PTR3P43606 678 aa4.4□□□□□ -1.7
SEC9YGR009C YNL092WP53934 400 aa4.4□□□□□ -1.7
SEC9YGR009C ASI3P53983 676 aa4.4□□□□□ -1.7
SEC9YGR009C HHT1P61830 136 aa4.4□□□□□ -1.7
SEC9YGR009C YMR034CQ05131 434 aaPredicted RBP4.4□□□□□ -1.7
SEC9YGR009C MRX8Q05473 314 aa4.4□□□□□ -1.7
SEC9YGR009C YOL073CQ08232 322 aa4.4□□□□□ -1.7
SEC9YGR009C LCB4Q12246 624 aa4.4□□□□□ -1.7
SEC9YGR009C RIB2Q12362 591 aaKnown RBP4.4□□□□□ -1.7
SEC9YGR009C YPR015CQ12531 247 aa4.4□□□□□ -1.7
SEC9YGR009C YDL007C-AQ2V2Q0 85 aa4.4□□□□□ -1.7
SEC9YGR009C CYC7P00045 113 aa4.4□□□□□ -1.71
SEC9YGR009C PRP45P28004 379 aaPredicted RBP4.4□□□□□ -1.71
SEC9YGR009C SKN1P33336 771 aa4.4□□□□□ -1.71
SEC9YGR009C YHL026CP38740 315 aa4.4□□□□□ -1.71
SEC9YGR009C YHR035WP38769 630 aa4.4□□□□□ -1.71
SEC9YGR009C YHR130CP38834 111 aa4.4□□□□□ -1.71
SEC9YGR009C YHR177WP38867 453 aa4.4□□□□□ -1.71
SEC9YGR009C YMR144WP40214 342 aaKnown RBP4.4□□□□□ -1.71
SEC9YGR009C YFL064CP43540 174 aa4.4□□□□□ -1.71
SEC9YGR009C RPS10BP46784 105 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 194.9 ms