RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A RPN8Q08723 338 aaKnown RBP2.42□□□□□ -2.02
YFL002W-AYFL002W-A EAF3Q12432 401 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A MRX4Q12467 430 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A YER078W-AQ3E7A2 54 aa2.42□□□□□ -2.02
YFL002W-AYFL002W-A PPH21P23594 369 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A ALK2P32789 676 aaPredicted RBP2.41□□□□□ -2.02
YFL002W-AYFL002W-A ECM13P38195 257 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A SSU72P53538 206 aaPredicted RBP2.41□□□□□ -2.02
YFL002W-AYFL002W-A FMP41P53889 259 aaKnown RBP2.41□□□□□ -2.02
YFL002W-AYFL002W-A GGA1Q06336 557 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A YDR018CQ12185 396 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A PRM5P40476 318 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A ATG18P43601 500 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A MIG2P53035 382 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A YNL046WP53956 172 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A PRM15Q03262 622 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A YMR279CQ03263 540 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A RRP42Q12277 265 aaPredicted RBP2.41□□□□□ -2.02
YFL002W-AYFL002W-A YAL063C-AQ3E791 96 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A STE7P06784 515 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A CLG1P35190 452 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A BRR6P53062 197 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A PDR17P53844 350 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A PUT1P09368 476 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A GCY1P14065 312 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
YFL002W-AYFL002W-A ARC40P38328 384 aaKnown RBP2.41□□□□□ -2.02
YFL002W-AYFL002W-A SDS23P53172 527 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A WSC2P53832 503 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A ADD37Q03233 198 aa2.41□□□□□ -2.02
YFL002W-AYFL002W-A ILV6P25605 309 aaKnown RBP2.4□□□□□ -2.02
YFL002W-AYFL002W-A HEK2P38199 381 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
YFL002W-AYFL002W-A MDV1P47025 714 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A MMS2P53152 137 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A SPG4Q04438 115 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A YMR315WQ04869 349 aaKnown RBP2.4□□□□□ -2.02
YFL002W-AYFL002W-A AGC1Q12482 902 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A RPL28P02406 149 aaKnown RBP2.4□□□□□ -2.02
YFL002W-AYFL002W-A RPL4AP10664 362 aaKnown RBP2.4□□□□□ -2.02
YFL002W-AYFL002W-A MSI1P13712 422 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A YCR043CP25361 127 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A MRPL28P36527 147 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A ICE2P40499 491 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A RPL4BP49626 362 aaKnown RBP2.4□□□□□ -2.02
YFL002W-AYFL002W-A CRZ1P53968 678 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A YDR415CQ04033 374 aaPredicted RBP2.4□□□□□ -2.02
YFL002W-AYFL002W-A RIF2Q06208 395 aa2.4□□□□□ -2.02
YFL002W-AYFL002W-A SEC4P07560 215 aaKnown RBP2.4□□□□□ -2.03
YFL002W-AYFL002W-A DBF2P22204 572 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A SCO2P38072 301 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A SHE1P38200 338 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A YJL213WP40896 331 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A NCA3P46955 337 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A RRS1Q08746 203 aaKnown RBP2.4□□□□□ -2.03
YFL002W-AYFL002W-A TRM5P38793 499 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A YDL144CQ07589 356 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A YPL150WQ12152 901 aa2.4□□□□□ -2.03
YFL002W-AYFL002W-A LSO2Q3E772 92 aaKnown RBP2.4□□□□□ -2.03
YFL002W-AYFL002W-A RPB5P20434 215 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A CSE2P33308 149 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A MRPL3P36516 390 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A AVT7P40501 490 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A YIL067CP40514 678 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A CPR1P14832 162 aaKnown RBP2.39□□□□□ -2.03
YFL002W-AYFL002W-A FIG1P38224 298 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A FZO1P38297 855 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A WSC4P38739 605 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A YPL113CQ02961 396 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A ARO7P32178 256 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A DXO1Q06349 442 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A NOC4Q06512 552 aaPredicted RBP2.39□□□□□ -2.03
YFL002W-AYFL002W-A YOR186WQ08560 144 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A ERV2Q12284 196 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A SNU23Q12368 194 aaPredicted RBP2.39□□□□□ -2.03
YFL002W-AYFL002W-A CPR4P25334 318 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A TRR1P29509 319 aaKnown RBP2.39□□□□□ -2.03
YFL002W-AYFL002W-A YPL245WQ12179 454 aaKnown RBP2.39□□□□□ -2.03
YFL002W-AYFL002W-A YCL021W-AQ96VH3 125 aa2.39□□□□□ -2.03
YFL002W-AYFL002W-A OAC1P32332 324 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A RRP3P38712 501 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A YHR127WP38833 243 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A SRP14P38985 146 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A PEX17P40155 199 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A UBC12P52491 188 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A YGR015CP53208 328 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A RRP17Q04031 235 aaPredicted RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A ORM2Q06144 216 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A DTD1Q07648 150 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A RAX2Q12465 1220 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A TPS2P31688 896 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A RFS1P38234 210 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A SHG1P38337 142 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A LSM12P38828 187 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A RRG9P40156 214 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A GRX8Q05926 109 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A CDC28P00546 298 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A CAT2P32796 670 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A ACT1P60010 375 aaKnown RBP2.38□□□□□ -2.03
YFL002W-AYFL002W-A MHP1P43638 1398 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A SCS3P53012 380 aa2.38□□□□□ -2.03
YFL002W-AYFL002W-A CRH1P53301 507 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 87 ms