RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W YKL071WP36086 256 aa2.09□□□□□ -2.08
VPS41YDR080W YBR241CP38142 488 aa2.09□□□□□ -2.08
VPS41YDR080W HEK2P38199 381 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08 RIP-Chip
VPS41YDR080W ALP1P38971 573 aa2.09□□□□□ -2.08
VPS41YDR080W GEP7P53171 287 aa2.09□□□□□ -2.08
VPS41YDR080W TWF1P53250 332 aa2.09□□□□□ -2.08
VPS41YDR080W SAM50P53969 484 aa2.09□□□□□ -2.08
VPS41YDR080W RNY1Q02933 434 aaKnown RBP2.09□□□□□ -2.08
VPS41YDR080W PRP3Q03338 469 aaPredicted RBP2.09□□□□□ -2.08
VPS41YDR080W RRT8Q08219 342 aa2.09□□□□□ -2.08
VPS41YDR080W ERD2P18414 219 aa2.08□□□□□ -2.08
VPS41YDR080W RNA14P25298 677 aaKnown RBP2.08□□□□□ -2.08
VPS41YDR080W SOR1P35497 357 aaKnown RBP2.08□□□□□ -2.08
VPS41YDR080W COS9P36034 407 aa2.08□□□□□ -2.08
VPS41YDR080W GDI1P39958 451 aaKnown RBP2.08□□□□□ -2.08
VPS41YDR080W DUO1P53168 247 aaKnown RBP2.08□□□□□ -2.08
VPS41YDR080W COS6P53344 381 aa2.08□□□□□ -2.08
VPS41YDR080W CIK1Q01649 594 aa2.08□□□□□ -2.08
VPS41YDR080W GGA1Q06336 557 aa2.08□□□□□ -2.08
VPS41YDR080W ARV1Q06541 321 aa2.08□□□□□ -2.08
VPS41YDR080W NDL1Q06568 189 aa2.08□□□□□ -2.08
VPS41YDR080W SOR2Q07786 357 aa2.08□□□□□ -2.08
VPS41YDR080W PSR1Q07800 427 aa2.08□□□□□ -2.08
VPS41YDR080W YOL029CQ08187 201 aa2.08□□□□□ -2.08
VPS41YDR080W RRS1Q08746 203 aaKnown RBP2.08□□□□□ -2.08
VPS41YDR080W FIT3Q08907 204 aa2.08□□□□□ -2.08
VPS41YDR080W UIP4Q08926 304 aa2.08□□□□□ -2.08
VPS41YDR080W AYT1Q12226 474 aa2.08□□□□□ -2.08
VPS41YDR080W YKL018C-AQ3E7A7 99 aa2.08□□□□□ -2.08
VPS41YDR080W HSP30P25619 332 aa2.08□□□□□ -2.08
VPS41YDR080W SNC1P31109 117 aa2.08□□□□□ -2.08
VPS41YDR080W IES6P32617 166 aa2.08□□□□□ -2.08
VPS41YDR080W JEN1P36035 616 aa2.08□□□□□ -2.08
VPS41YDR080W YNL208WP40159 199 aaKnown RBP2.08□□□□□ -2.08
VPS41YDR080W UBC13P52490 153 aa2.08□□□□□ -2.08
VPS41YDR080W ERP1Q05359 219 aaKnown RBP2.08□□□□□ -2.08
VPS41YDR080W YEH2Q07950 538 aa2.08□□□□□ -2.08
VPS41YDR080W YHR214C-EQ8TGK0 99 aa2.08□□□□□ -2.08
VPS41YDR080W LIN1P38852 340 aaPredicted RBP2.07□□□□□ -2.08
VPS41YDR080W RCY1P39531 840 aa2.07□□□□□ -2.08
VPS41YDR080W YEL068CP39977 110 aa2.07□□□□□ -2.08
VPS41YDR080W DIA3P52290 468 aa2.07□□□□□ -2.08
VPS41YDR080W UFD1P53044 361 aa2.07□□□□□ -2.08
VPS41YDR080W CUS2P53830 285 aaPredicted RBP2.07□□□□□ -2.08
VPS41YDR080W SVL3Q03088 825 aaKnown RBP2.07□□□□□ -2.08
VPS41YDR080W FMN1Q03778 218 aa2.07□□□□□ -2.08
VPS41YDR080W YOL163WP0CF20 169 aa2.07□□□□□ -2.08
VPS41YDR080W BIG1P38813 335 aa2.07□□□□□ -2.08
VPS41YDR080W YDC1Q02896 317 aa2.07□□□□□ -2.08
VPS41YDR080W MFG1Q07684 458 aa2.07□□□□□ -2.08
VPS41YDR080W RKM1Q08961 583 aaPredicted RBP2.07□□□□□ -2.08
VPS41YDR080W FRE8Q12209 686 aa2.07□□□□□ -2.08
VPS41YDR080W MER1P16523 270 aa2.07□□□□□ -2.08
VPS41YDR080W CMK2P22517 447 aa2.07□□□□□ -2.08
VPS41YDR080W TIM12P32830 109 aa2.07□□□□□ -2.08
VPS41YDR080W PTC1P35182 281 aa2.07□□□□□ -2.08
VPS41YDR080W MDM31P38880 579 aa2.07□□□□□ -2.08
VPS41YDR080W YGR201CP42936 225 aa2.07□□□□□ -2.08
VPS41YDR080W RPS0BP46654 252 aaKnown RBP2.07□□□□□ -2.08
VPS41YDR080W URB2P47108 1174 aa2.07□□□□□ -2.08
VPS41YDR080W SPC19Q03954 165 aa2.07□□□□□ -2.08
VPS41YDR080W SNT309Q06091 175 aaPredicted RBP2.07□□□□□ -2.08
VPS41YDR080W YOL131WQ08270 108 aa2.07□□□□□ -2.08
VPS41YDR080W YCL048W-AQ2V2Q2 79 aa2.07□□□□□ -2.08
VPS41YDR080W TIM9O74700 87 aa2.06□□□□□ -2.08
VPS41YDR080W PDE2P06776 526 aa2.06□□□□□ -2.08
VPS41YDR080W GDH1P07262 454 aaKnown RBP2.06□□□□□ -2.08
VPS41YDR080W BUD5P25300 642 aaPredicted RBP2.06□□□□□ -2.08
VPS41YDR080W ECM34P38728 170 aa2.06□□□□□ -2.08
VPS41YDR080W KRE29P40026 464 aa2.06□□□□□ -2.08
VPS41YDR080W NUP57P48837 541 aa2.06□□□□□ -2.08
VPS41YDR080W MEP3P53390 489 aa2.06□□□□□ -2.08
VPS41YDR080W YNR064CP53750 290 aa2.06□□□□□ -2.08
VPS41YDR080W SSK1Q07084 712 aa2.06□□□□□ -2.08
VPS41YDR080W RPN6Q12377 434 aa2.06□□□□□ -2.08
VPS41YDR080W ASF2P32448 525 aaPredicted RBP2.06□□□□□ -2.08
VPS41YDR080W NDC1P32500 655 aa2.06□□□□□ -2.08
VPS41YDR080W TIF3P34167 436 aaKnown RBP2.06□□□□□ -2.08
VPS41YDR080W LAG1P38703 411 aa2.06□□□□□ -2.08
VPS41YDR080W YHR035WP38769 630 aa2.06□□□□□ -2.08
VPS41YDR080W ISC1P40015 477 aaKnown RBP2.06□□□□□ -2.08
VPS41YDR080W RMD9P53140 646 aaKnown RBP2.06□□□□□ -2.08
VPS41YDR080W MPC1P53157 130 aaKnown RBP2.06□□□□□ -2.08
VPS41YDR080W MRP51Q02950 344 aa2.06□□□□□ -2.08
VPS41YDR080W YMR102CQ03177 834 aa2.06□□□□□ -2.08
VPS41YDR080W VPS71Q03433 280 aa2.06□□□□□ -2.08
VPS41YDR080W SNF8Q12483 233 aa2.06□□□□□ -2.08
VPS41YDR080W ARG81P05085 880 aa2.05□□□□□ -2.08
VPS41YDR080W YPK2P18961 677 aa2.05□□□□□ -2.08
VPS41YDR080W GIT1P25346 518 aa2.05□□□□□ -2.08
VPS41YDR080W CSM1P25651 190 aa2.05□□□□□ -2.08
VPS41YDR080W TCM62P38228 572 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W PFS2P42841 465 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W IMD4P50094 524 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W YHC1Q05900 231 aaKnown RBP2.05□□□□□ -2.08
VPS41YDR080W SPO77Q06134 477 aa2.05□□□□□ -2.08
VPS41YDR080W PPT2Q12036 173 aa2.05□□□□□ -2.08
VPS41YDR080W BTS1Q12051 335 aa2.05□□□□□ -2.08
VPS41YDR080W RNH203Q12338 110 aa2.05□□□□□ -2.08
VPS41YDR080W TDH2P00358 332 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms