RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W BER1Q06688 274 aaKnown RBP6.31□□□□□ -1.4
NUP84YDL116W YDL086WQ07505 273 aa6.31□□□□□ -1.4
NUP84YDL116W BRX1Q08235 291 aaKnown RBP6.31□□□□□ -1.4
NUP84YDL116W BTS1Q12051 335 aa6.31□□□□□ -1.4
NUP84YDL116W RRI1Q12468 440 aa6.31□□□□□ -1.4
NUP84YDL116W ADH7P25377 361 aa6.31□□□□□ -1.4
NUP84YDL116W SKN7P38889 622 aa6.31□□□□□ -1.4
NUP84YDL116W VMA21P41806 77 aa6.31□□□□□ -1.4
NUP84YDL116W LOH1P47055 219 aa6.31□□□□□ -1.4
NUP84YDL116W HNT2P49775 206 aa6.31□□□□□ -1.4
NUP84YDL116W YGL101WP53144 215 aa6.31□□□□□ -1.4
NUP84YDL116W LRS4Q04087 347 aaKnown RBP6.31□□□□□ -1.4
NUP84YDL116W PEX30Q06169 523 aa6.31□□□□□ -1.4
NUP84YDL116W YKR104WP0CE69 306 aa6.3□□□□□ -1.4
NUP84YDL116W RPL20AP0CX23 172 aaKnown RBP6.3□□□□□ -1.4
NUP84YDL116W RPL20BP0CX24 172 aaPredicted RBP6.3□□□□□ -1.4
NUP84YDL116W ZRC1P20107 442 aa6.3□□□□□ -1.4
NUP84YDL116W MGR1P25573 417 aa6.3□□□□□ -1.4
NUP84YDL116W YBL010CP32788 280 aa6.3□□□□□ -1.4
NUP84YDL116W ATG8P38182 117 aaRIP-Chip data6.3□□□□□ -1.4not detected
NUP84YDL116W POP8P38208 133 aa6.3□□□□□ -1.4
NUP84YDL116W ASP1P38986 381 aaPredicted RBP6.3□□□□□ -1.4
NUP84YDL116W PHB1P40961 287 aa6.3□□□□□ -1.4
NUP84YDL116W YFR054CP43622 192 aa6.3□□□□□ -1.4
NUP84YDL116W GPI14P47088 403 aaKnown RBP6.3□□□□□ -1.4
NUP84YDL116W CTF19Q02732 369 aa6.3□□□□□ -1.4
NUP84YDL116W SPC19Q03954 165 aa6.3□□□□□ -1.4
NUP84YDL116W VBA4Q04602 768 aaKnown RBP6.3□□□□□ -1.4
NUP84YDL116W FCF2Q12035 217 aaPredicted RBP6.3□□□□□ -1.4
NUP84YDL116W ORT1Q12375 292 aa6.3□□□□□ -1.4
NUP84YDL116W NAG1Q8TGN9 163 aa6.3□□□□□ -1.4
NUP84YDL116W FSH3Q99369 266 aa6.3□□□□□ -1.4
NUP84YDL116W PUT1P09368 476 aa6.3□□□□□ -1.4
NUP84YDL116W SEC12P11655 471 aa6.3□□□□□ -1.4
NUP84YDL116W DPM1P14020 267 aaKnown RBP6.3□□□□□ -1.4
NUP84YDL116W IFM1P25038 676 aa6.3□□□□□ -1.4
NUP84YDL116W CHK1P38147 527 aa6.3□□□□□ -1.4
NUP84YDL116W SDS24P38314 527 aa6.3□□□□□ -1.4
NUP84YDL116W NEM1P38757 446 aa6.3□□□□□ -1.4
NUP84YDL116W AIR1P40507 360 aaKnown RBP6.3□□□□□ -1.4
NUP84YDL116W EMC5P40540 141 aa6.3□□□□□ -1.4
NUP84YDL116W ZIM17P42844 174 aa6.3□□□□□ -1.4
NUP84YDL116W QRI1P43123 477 aaKnown RBP6.3□□□□□ -1.4
NUP84YDL116W MRX5P47007 382 aa6.3□□□□□ -1.4
NUP84YDL116W TEX1P53851 422 aaKnown RBP6.3□□□□□ -1.4
NUP84YDL116W VPS68Q12016 184 aa6.3□□□□□ -1.4
NUP84YDL116W HNM1P19807 563 aa6.29□□□□□ -1.4
NUP84YDL116W RPB8P20436 146 aa6.29□□□□□ -1.4
NUP84YDL116W RPD3P32561 433 aa6.29□□□□□ -1.4
NUP84YDL116W ECM15P35195 104 aa6.29□□□□□ -1.4
NUP84YDL116W CDS1P38221 457 aa6.29□□□□□ -1.4
NUP84YDL116W RTC3P38804 111 aaPredicted RBP6.29□□□□□ -1.4
NUP84YDL116W GET2P40056 285 aa6.29□□□□□ -1.4
NUP84YDL116W BUL1P48524 976 aa6.29□□□□□ -1.4
NUP84YDL116W ATG33Q06485 197 aa6.29□□□□□ -1.4
NUP84YDL116W DET1Q99288 334 aaKnown RBP6.29□□□□□ -1.4
NUP84YDL116W ELO2P25358 347 aa6.28□□□□□ -1.4
NUP84YDL116W YCR101CP25607 182 aa6.28□□□□□ -1.4
NUP84YDL116W YKL162CP36052 402 aa6.28□□□□□ -1.4
NUP84YDL116W YBR013CP38215 129 aa6.28□□□□□ -1.4
NUP84YDL116W POA1P38218 177 aa6.28□□□□□ -1.4
NUP84YDL116W NOP16P40007 231 aaKnown RBP6.28□□□□□ -1.4
NUP84YDL116W ICE2P40499 491 aa6.28□□□□□ -1.4
NUP84YDL116W SMK1P41808 388 aa6.28□□□□□ -1.4
NUP84YDL116W BXI1P48558 297 aa6.28□□□□□ -1.4
NUP84YDL116W FLC3P53121 802 aa6.28□□□□□ -1.4
NUP84YDL116W OGG1P53397 376 aaPredicted RBP6.28□□□□□ -1.4
NUP84YDL116W HHO1P53551 258 aa6.28□□□□□ -1.4
NUP84YDL116W NOC4Q06512 552 aaPredicted RBP6.28□□□□□ -1.4
NUP84YDL116W YLR146W-AQ2V2P1 62 aa6.28□□□□□ -1.4
NUP84YDL116W MSK1P32048 576 aa6.28□□□□□ -1.4
NUP84YDL116W AFR1P33304 620 aa6.28□□□□□ -1.4
NUP84YDL116W PPZ2P33329 710 aa6.28□□□□□ -1.4
NUP84YDL116W IKI1P38874 309 aa6.28□□□□□ -1.4
NUP84YDL116W YJR056CP47115 236 aa6.28□□□□□ -1.4
NUP84YDL116W MRPL22P53881 309 aa6.28□□□□□ -1.4
NUP84YDL116W NRK1P53915 240 aa6.28□□□□□ -1.4
NUP84YDL116W APM1Q00776 475 aaPredicted RBP6.28□□□□□ -1.4
NUP84YDL116W ADD37Q03233 198 aa6.28□□□□□ -1.4
NUP84YDL116W CBP6P07253 162 aaPredicted RBP6.27□□□□□ -1.41
NUP84YDL116W YLL053CP0CD98 152 aa6.27□□□□□ -1.41
NUP84YDL116W YML003WP0CF16 290 aa6.27□□□□□ -1.41
NUP84YDL116W RPL1AP0CX43 217 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W RPL1BP0CX44 217 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W MXR2P25566 168 aa6.27□□□□□ -1.41
NUP84YDL116W SFA1P32771 386 aa6.27□□□□□ -1.41
NUP84YDL116W NTF2P33331 125 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W GIP2P40036 548 aa6.27□□□□□ -1.41
NUP84YDL116W SWM2P40342 146 aa6.27□□□□□ -1.41
NUP84YDL116W PGD1P40356 397 aa6.27□□□□□ -1.41
NUP84YDL116W GTT1P40582 234 aa6.27□□□□□ -1.41
NUP84YDL116W RMD9P53140 646 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W BSC5P53755 489 aa6.27□□□□□ -1.41
NUP84YDL116W CAC2Q04199 468 aa6.27□□□□□ -1.41
NUP84YDL116W AVO1Q08236 1176 aa6.27□□□□□ -1.41
NUP84YDL116W UBI4P0CG63 381 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W RPL40AP0CH08 128 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W RPL40BP0CH09 128 aaKnown RBP6.27□□□□□ -1.41
NUP84YDL116W POF1P25576 258 aa6.27□□□□□ -1.41
NUP84YDL116W PPA2P28239 310 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 119.8 ms