RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 HNM1P19807 563 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 COS9P36034 407 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 OM14P38325 134 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 AVT7P40501 490 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 GTF1P53260 183 aaPredicted RBP9.08□□□□□ -0.96
RDN18-1RDN18-1 NNT1Q05874 261 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 CTS2Q06350 511 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 MCH4Q08268 501 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 FEX2Q08991 375 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 YRM1Q12340 786 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 SEC16P48415 2195 aaKnown RBP9.08□□□□□ -0.96
RDN18-1RDN18-1 MAG1P22134 296 aaKnown RBP9.08□□□□□ -0.96
RDN18-1RDN18-1 HXT2P23585 541 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 ADH7P25377 361 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 MRP20P32387 263 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 ARO4P32449 370 aaKnown RBP9.08□□□□□ -0.96
RDN18-1RDN18-1 PAN3P36102 679 aaPredicted RBP9.08□□□□□ -0.96
RDN18-1RDN18-1 FRM2P37261 193 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 YDR102CQ03864 110 aa9.08□□□□□ -0.96
RDN18-1RDN18-1 RVB1Q03940 463 aaKnown RBP9.08□□□□□ -0.96
RDN18-1RDN18-1 IRA1P18963 3092 aa9.07□□□□□ -0.96
RDN18-1RDN18-1 SEC22P22214 214 aa9.07□□□□□ -0.96
RDN18-1RDN18-1 AGA2P32781 87 aa9.07□□□□□ -0.96
RDN18-1RDN18-1 FMT1P32785 401 aa9.07□□□□□ -0.96
RDN18-1RDN18-1 APD1P38281 316 aa9.07□□□□□ -0.96
RDN18-1RDN18-1 YMR144WP40214 342 aaKnown RBP9.07□□□□□ -0.96
RDN18-1RDN18-1 ERJ5P43613 295 aaPredicted RBP9.07□□□□□ -0.96
RDN18-1RDN18-1 YJR111CP47148 283 aaKnown RBP9.07□□□□□ -0.96
RDN18-1RDN18-1 RDL2Q08742 149 aaKnown RBP9.07□□□□□ -0.96
RDN18-1RDN18-1 IRA2P19158 3079 aa9.07□□□□□ -0.96
RDN18-1RDN18-1 YAL064W-BO13512 126 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 YLR358CO13565 187 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 COX1P00401 534 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 ARO9P38840 513 aaPredicted RBP9.06□□□□□ -0.96
RDN18-1RDN18-1 YER010CP40011 234 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 LOH1P47055 219 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 SAM50P53969 484 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 GIS1Q03833 894 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 YLR456WQ06199 204 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 EAF3Q12432 401 aa9.06□□□□□ -0.96
RDN18-1RDN18-1 MCM10P32354 571 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 EMP24P32803 203 aaKnown RBP9.05□□□□□ -0.96
RDN18-1RDN18-1 FLO10P36170 1169 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 UMP1P38293 148 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 AAH1P53909 347 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 NRG1Q03125 231 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 YJR112W-AQ3E743 109 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 ACC1Q00955 2233 aaKnown RBP9.05□□□□□ -0.96
RDN18-1RDN18-1 KAE1P36132 386 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 MRPL36P36531 177 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 NIT2P47016 307 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 PHB2P50085 310 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 ATG21Q02887 496 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 YDR249CQ03787 373 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 ANT1Q06497 328 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 YHR214C-EQ8TGK0 99 aa9.05□□□□□ -0.96
RDN18-1RDN18-1 MSW1P04803 379 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 PUG1P40100 303 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 YHC3P47040 408 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 PGU1P47180 361 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 RNH201P53942 307 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 TIM44Q01852 431 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 SYM1Q06563 197 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 GRC3Q07845 632 aa9.04□□□□□ -0.96
RDN18-1RDN18-1 CDC26P14724 124 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 TIP1P27654 210 aaPredicted RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 CAM1P29547 415 aaKnown RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 VMA5P31412 392 aaKnown RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 PPZ2P33329 710 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 CUP9P41817 306 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 ECL1P48235 211 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 HNT1Q04344 158 aaKnown RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 HNT3Q08702 217 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 MCT1Q12283 360 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 HAA1Q12753 694 aaKnown RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 PET20Q99373 253 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 CDC34P14682 295 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 CPR4P25334 318 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 BFR1P38934 470 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
RDN18-1RDN18-1 SWM2P40342 146 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 BMT5P40493 336 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 LSM1P47017 172 aaKnown RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 UBP8P50102 471 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 ACS2P52910 683 aaKnown RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 BSC5P53755 489 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 YMR265CQ03508 461 aaKnown RBP9.03□□□□□ -0.96
RDN18-1RDN18-1 YOR376WQ08900 122 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 TFC7Q12415 435 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 ERP4Q12450 207 aa9.03□□□□□ -0.96
RDN18-1RDN18-1 TPI1P00942 248 aaKnown RBP9.02□□□□□ -0.97
RDN18-1RDN18-1 SCEIP03882 235 aa9.02□□□□□ -0.97
RDN18-1RDN18-1 FUS3P16892 353 aaKnown RBP9.02□□□□□ -0.97
RDN18-1RDN18-1 VAM7P32912 316 aa9.02□□□□□ -0.97
RDN18-1RDN18-1 POP8P38208 133 aa9.02□□□□□ -0.97
RDN18-1RDN18-1 GNP1P48813 663 aa9.02□□□□□ -0.97
RDN18-1RDN18-1 GIM3P53900 129 aa9.02□□□□□ -0.97
RDN18-1RDN18-1 TRS23Q03784 219 aa9.02□□□□□ -0.97
RDN18-1RDN18-1 VBA4Q04602 768 aaKnown RBP9.02□□□□□ -0.97
RDN18-1RDN18-1 YLR108CQ12259 485 aa9.02□□□□□ -0.97
RDN18-1RDN18-1 YKR073CP36153 106 aa9.01□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms