RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 EFCAB5A4FU69 1503 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 ARHGEF40Q8TER5 1519 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 TMEM127O75204 238 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 SOX5P35711 763 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 INHBCP55103 352 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 VPS72Q15906 364 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 FSCN1Q16658 493 aaKnown RBP6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 DOK3Q7L591 496 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 LDLRAD3Q86YD5 345 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 ULK2Q8IYT8 1036 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 SNX33Q8WV41 574 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 ACAP3Q96P50 834 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 FAM193BQ96PV7 902 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 CDC5LQ99459 802 aaKnown RBP6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 CFAP74Q9C0B2 1584 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 FER1L4A9Z1Z3 1794 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 RICTORQ6R327 1708 aa6.76□□□□□ -1.33
HMGB3P5-201ENST00000428894 FRMPD1Q5SYB0 1578 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 IQSEC2Q5JU85 1478 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 A0A087X1B8 175 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 RECQL4O94761 1208 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 SCAF4O95104 1147 aaKnown RBP6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 HSP90B1P14625 803 aaKnown RBP6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 CTSSP25774 331 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 MASP1P48740 699 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 CRB2Q5IJ48 1285 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 CHAC2Q8WUX2 184 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 DPP7Q9UHL4 492 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 EIF2B4Q9UI10 523 aaKnown RBP6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 PTPRTO14522 1441 aa6.75□□□□□ -1.33
HMGB3P5-201ENST00000428894 TTC37Q6PGP7 1564 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 ZMYM3Q14202 1370 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 PRR5-ARHGAP8B1AHC4 643 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 TRIM24O15164 1050 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 ENPP1P22413 925 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 NR4A1P22736 598 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 CANXP27824 592 aaKnown RBP6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 CT47A1Q5JQC4 288 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 MRGPREQ86SM8 312 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 SYNE4Q8N205 404 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 LENG9Q96B70 501 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 RAX2Q96IS3 184 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 PAWRQ96IZ0 340 aaKnown RBP6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 NDC1Q9BTX1 674 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 SPON1Q9HCB6 807 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 GPRC5DQ9NZD1 345 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 CLCA2Q9UQC9 943 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 STRCQ7RTU9 1775 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 UHRF1BP1Q6BDS2 1440 aa6.74□□□□□ -1.33
HMGB3P5-201ENST00000428894 ZMYM4Q5VZL5 1548 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 ZFYVE16Q7Z3T8 1539 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 GOLGA8AA7E2F4 631 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 BRINP1O60477 761 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 ITGA10O75578 1167 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 CDK17Q00537 523 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 GPRIN1Q7Z2K8 1008 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 MRGPRGQ86SM5 289 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 LILRA3Q8N6C8 439 aaPredicted RBP6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 MDM1Q8TC05 714 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 PRRX2Q99811 253 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 KCNH6Q9H252 994 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 ZNF768Q9H5H4 540 aaKnown RBP6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 FZD1Q9UP38 647 aa6.73□□□□□ -1.33
HMGB3P5-201ENST00000428894 RAPGEF6Q8TEU7 1601 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 GASTP01350 101 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 KRT4P19013 534 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 APOBEC3AP31941 199 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 ANKS6Q68DC2 871 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 IQSEC1Q6DN90 963 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 Q6ZPA2 131 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 RHOUQ7L0Q8 258 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 CMIPQ8IY22 773 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 RPUSD2Q8IZ73 545 aaKnown RBP6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 TGFBRAP1Q8WUH2 860 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 TTPALQ9BTX7 342 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 VTA1Q9NP79 307 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 C11orf21Q9P2W6 132 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 RPTORQ8N122 1335 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 ATP10AO60312 1499 aa6.72□□□□□ -1.33
HMGB3P5-201ENST00000428894 TMEM191CA6NGB0 347 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 AHRRA9YTQ3 701 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 RAMP2O60895 175 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 CLSTN1O94985 981 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 ITGB1P05556 798 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 SCAND1P57086 179 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 CCT2P78371 535 aaKnown RBP6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 PURAQ00577 322 aaKnown RBP6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 CSRP2Q16527 193 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 PDZD4Q76G19 769 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 AFAP1L2Q8N4X5 818 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 PROKR1Q8TCW9 393 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 ZNF480Q8WV37 535 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 LMBR1Q8WVP7 490 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 DCLRE1CQ96SD1 692 aaKnown RBP6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 TRPM5Q9NZQ8 1165 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 ARHGEF12Q9NZN5 1544 aa6.71□□□□□ -1.34
HMGB3P5-201ENST00000428894 C9orf84Q5VXU9 1444 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms