RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	ANB1	P19211	157 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	PUP1	P25043	261 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	STP22	P25604	385 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	TMT1	P32643	299 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	NGR1	P32831	672 aa	Known RBP	4.08	□□□□□ -1.76
YPL260W	YPL260W	ZTA1	P38230	334 aa	Known RBP	4.08	□□□□□ -1.76
YPL260W	YPL260W	AIM3	P38266	947 aa	Known RBP	4.08	□□□□□ -1.76
YPL260W	YPL260W	ARO9	P38840	513 aa	Predicted RBP	4.08	□□□□□ -1.76
YPL260W	YPL260W	SSN3	P39073	555 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	HAT2	P39984	401 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	SMK1	P41808	388 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	QRI7	P43122	407 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	BUD9	P53226	547 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YGR079W	P53249	370 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	BOR1	P53838	576 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	TIM8	P57744	87 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	RSM23	Q01163	450 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YDR391C	Q04170	232 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YPR109W	Q06104	294 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
YPL260W	YPL260W	YLL056C	Q12177	298 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	YOL114C	Q12322	202 aa		4.08	□□□□□ -1.76
YPL260W	YPL260W	ECM29	P38737	1868 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	TIM9	O74700	87 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	RPS31	P05759	152 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	SIR2	P06700	562 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	PHO2	P07269	559 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	GAL7	P08431	366 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	UBI4	P0CG63	381 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	RPL40A	P0CH08	128 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	RPL40B	P0CH09	128 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	SCH9	P11792	824 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	SAM35	P14693	329 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	SNF5	P18480	905 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	YCR090C	P25654	182 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	MRP17	P28778	131 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	SDH3	P33421	198 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	MGE1	P38523	228 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	URA8	P38627	578 aa	Predicted RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	BDH1	P39714	382 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	YEL057C	P39983	233 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	YER188W	P40103	239 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	RRG9	P40156	214 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	OSW5	P40219	148 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	MPM1	P40364	252 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	RRD1	P40454	393 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	YIL152W	P40455	235 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	ALY2	P47029	1046 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	DIA1	P54005	336 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	YKR011C	Q02209	353 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	YMR087W	Q04299	284 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	GMC1	Q04399	608 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	ROY1	Q04847	553 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	TDA6	Q06466	467 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	CTR3	Q06686	241 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	AIM39	Q08223	395 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	FSF1	Q12029	327 aa	Known RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	FCF2	Q12035	217 aa	Predicted RBP	4.07	□□□□□ -1.76
YPL260W	YPL260W	RDI1	Q12434	202 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	YKL018C-A	Q3E7A7	99 aa		4.07	□□□□□ -1.76
YPL260W	YPL260W	MES1	P00958	751 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	RPS9B	P05755	195 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	SWI5	P08153	709 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	TY2A-F	P0CX61	438 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	TY2A-GR2	P0CX62	438 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	ATP10	P18496	279 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	SCL1	P21243	252 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	YCK2	P23292	546 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	POP5	P28005	173 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	AAR2	P32357	355 aa	Predicted RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	UTR5	P32630	166 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	EMC3	P36039	253 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YPL260W	YPL260W	PRY2	P36110	329 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	BNA4	P38169	460 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	TRS20	P38334	175 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	NDT80	P38830	627 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	WSS1	P38838	269 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	GAA1	P39012	614 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	PAC2	P39937	518 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	FIR1	P40020	876 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	LRO1	P40345	661 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	EMC5	P40540	141 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	YFL012W	P43580	148 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	GPI14	P47088	403 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	YNR029C	P53729	429 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	YNL184C	P53876	108 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	APJ1	P53940	528 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	UPS3	Q04006	179 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	HPT1	Q04178	221 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	NOC4	Q06512	552 aa	Predicted RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	PUN1	Q06991	263 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	SHS1	Q07657	551 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	YLR049C	Q12110	428 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	RDL1	Q12305	139 aa	Known RBP	4.06	□□□□□ -1.76
YPL260W	YPL260W	YDR262W	Q12331	272 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	TRM13	Q12383	476 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	HUT1	Q12520	339 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	SAL1	D6W196	494 aa		4.06	□□□□□ -1.76
YPL260W	YPL260W	HIS1	P00498	297 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms