RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W YDR215CQ12240 137 aa3.25□□□□□ -1.89
MSD1YPL104W FRE6Q12473 712 aa3.25□□□□□ -1.89
MSD1YPL104W PAR32Q12515 295 aaKnown RBP3.25□□□□□ -1.89
MSD1YPL104W YLR099W-AQ3E798 87 aa3.25□□□□□ -1.89
MSD1YPL104W TAD3Q9URQ3 322 aa3.25□□□□□ -1.89
MSD1YPL104W TOR2P32600 2474 aaKnown RBP3.24□□□□□ -1.89
MSD1YPL104W PDE2P06776 526 aa3.24□□□□□ -1.89
MSD1YPL104W MRP1P10662 321 aaKnown RBP3.24□□□□□ -1.89
MSD1YPL104W GCN3P14741 305 aa3.24□□□□□ -1.89
MSD1YPL104W PUT3P25502 979 aaPredicted RBP3.24□□□□□ -1.89
MSD1YPL104W FUN19P28003 413 aaPredicted RBP3.24□□□□□ -1.89
MSD1YPL104W FUN26P31381 517 aa3.24□□□□□ -1.89
MSD1YPL104W DOA4P32571 926 aa3.24□□□□□ -1.89
MSD1YPL104W VPS17P32913 551 aa3.24□□□□□ -1.89
MSD1YPL104W MSN4P33749 630 aa3.24□□□□□ -1.89
MSD1YPL104W TMA19P35691 167 aaKnown RBP3.24□□□□□ -1.89
MSD1YPL104W SHE2P36068 246 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
MSD1YPL104W SRL3P36167 246 aa3.24□□□□□ -1.89
MSD1YPL104W TAT1P38085 619 aa3.24□□□□□ -1.89
MSD1YPL104W VBA2P38358 474 aaKnown RBP3.24□□□□□ -1.89
MSD1YPL104W PHO90P39535 881 aa3.24□□□□□ -1.89
MSD1YPL104W PMT6P42934 759 aa3.24□□□□□ -1.89
MSD1YPL104W MSE1P48525 536 aa3.24□□□□□ -1.89
MSD1YPL104W IMO32P53219 342 aa3.24□□□□□ -1.89
MSD1YPL104W PFA5Q03289 374 aa3.24□□□□□ -1.89
MSD1YPL104W MRPL1Q04599 285 aa3.24□□□□□ -1.89
MSD1YPL104W HOF1Q05080 669 aa3.24□□□□□ -1.89
MSD1YPL104W YDR286CQ05530 114 aa3.24□□□□□ -1.89
MSD1YPL104W YOL073CQ08232 322 aa3.24□□□□□ -1.89
MSD1YPL104W RDR1Q08904 546 aa3.24□□□□□ -1.89
MSD1YPL104W YLR122CQ12312 125 aa3.24□□□□□ -1.89
MSD1YPL104W YPR1Q12458 312 aa3.24□□□□□ -1.89
MSD1YPL104W SET6Q12529 373 aa3.24□□□□□ -1.89
MSD1YPL104W BRR2P32639 2163 aaKnown RBP3.24□□□□□ -1.89
MSD1YPL104W COX1P00401 534 aa3.23□□□□□ -1.89
MSD1YPL104W RPP2AP05319 106 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W STE12P13574 688 aa3.23□□□□□ -1.89
MSD1YPL104W FEN2P25621 512 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W HOM6P31116 359 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W PAD1P33751 242 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
MSD1YPL104W YNL208WP40159 199 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W NAS2P40555 220 aa3.23□□□□□ -1.89
MSD1YPL104W BAP3P41815 604 aa3.23□□□□□ -1.89
MSD1YPL104W PAM16P42949 149 aa3.23□□□□□ -1.89
MSD1YPL104W YFR054CP43622 192 aa3.23□□□□□ -1.89
MSD1YPL104W IRC18P47056 224 aa3.23□□□□□ -1.89
MSD1YPL104W PMT5P52867 743 aa3.23□□□□□ -1.89
MSD1YPL104W TPN1P53099 579 aa3.23□□□□□ -1.89
MSD1YPL104W LCL3P53153 274 aa3.23□□□□□ -1.89
MSD1YPL104W ERV29P53337 310 aa3.23□□□□□ -1.89
MSD1YPL104W YAT1P80235 687 aa3.23□□□□□ -1.89
MSD1YPL104W MSS11Q03825 758 aa3.23□□□□□ -1.89
MSD1YPL104W YMR252CQ04814 134 aa3.23□□□□□ -1.89
MSD1YPL104W DCR2Q05924 578 aa3.23□□□□□ -1.89
MSD1YPL104W MRPL51Q06090 140 aaPredicted RBP3.23□□□□□ -1.89
MSD1YPL104W HRT1Q08273 121 aa3.23□□□□□ -1.89
MSD1YPL104W YOR352WQ08816 343 aa3.23□□□□□ -1.89
MSD1YPL104W YPL199CQ08954 240 aa3.23□□□□□ -1.89
MSD1YPL104W BTS1Q12051 335 aa3.23□□□□□ -1.89
MSD1YPL104W LYS21Q12122 440 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W TIR4Q12218 487 aaPredicted RBP3.23□□□□□ -1.89
MSD1YPL104W COX9P07255 59 aa3.23□□□□□ -1.89
MSD1YPL104W PEP4P07267 405 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W ARF1P11076 181 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W GAS1P22146 559 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W DBF2P22204 572 aa3.23□□□□□ -1.89
MSD1YPL104W AIM17P23180 465 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W BOS1P25385 244 aa3.23□□□□□ -1.89
MSD1YPL104W HSP150P32478 413 aa3.23□□□□□ -1.89
MSD1YPL104W RCN1P36054 211 aa3.23□□□□□ -1.89
MSD1YPL104W ANR2P36090 516 aaPredicted RBP3.23□□□□□ -1.89
MSD1YPL104W CUP9P41817 306 aa3.23□□□□□ -1.89
MSD1YPL104W RPE1P46969 238 aa3.23□□□□□ -1.89
MSD1YPL104W SAY1P53324 424 aa3.23□□□□□ -1.89
MSD1YPL104W NUP116Q02630 1113 aa3.23□□□□□ -1.89
MSD1YPL104W TPO3Q06451 622 aa3.23□□□□□ -1.89
MSD1YPL104W MRPL35Q06678 367 aa3.23□□□□□ -1.89
MSD1YPL104W IRC19Q07843 230 aa3.23□□□□□ -1.89
MSD1YPL104W YOR283WQ12040 230 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W ATG41Q12048 136 aa3.23□□□□□ -1.89
MSD1YPL104W BAG7Q12128 409 aa3.23□□□□□ -1.89
MSD1YPL104W ERG27Q12452 347 aaKnown RBP3.23□□□□□ -1.89
MSD1YPL104W YIL046W-AQ3E7Z4 54 aa3.23□□□□□ -1.89
MSD1YPL104W GLT1Q12680 2145 aaKnown RBP3.22□□□□□ -1.89
MSD1YPL104W RPS18AP0CX55 146 aaKnown RBP3.22□□□□□ -1.89
MSD1YPL104W RPS18BP0CX56 146 aaPredicted RBP3.22□□□□□ -1.89
MSD1YPL104W RPB8P20436 146 aa3.22□□□□□ -1.89
MSD1YPL104W STE50P25344 346 aa3.22□□□□□ -1.89
MSD1YPL104W PAU2P32612 120 aa3.22□□□□□ -1.89
MSD1YPL104W SEF1P34228 1148 aa3.22□□□□□ -1.89
MSD1YPL104W KAE1P36132 386 aa3.22□□□□□ -1.89
MSD1YPL104W YER184CP39961 794 aa3.22□□□□□ -1.89
MSD1YPL104W YKE4P40544 346 aa3.22□□□□□ -1.89
MSD1YPL104W ECL1P48235 211 aa3.22□□□□□ -1.89
MSD1YPL104W BRR6P53062 197 aa3.22□□□□□ -1.89
MSD1YPL104W DOC1P53068 250 aa3.22□□□□□ -1.89
MSD1YPL104W APM1Q00776 475 aaPredicted RBP3.22□□□□□ -1.89
MSD1YPL104W MRX8Q05473 314 aa3.22□□□□□ -1.89
MSD1YPL104W RBS1Q05672 457 aaKnown RBP3.22□□□□□ -1.89
MSD1YPL104W YOR376WQ08900 122 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms