RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C CDC34P14682 295 aa6.73□□□□□ -1.33
RUP1YOR138C ADH7P25377 361 aa6.73□□□□□ -1.33
RUP1YOR138C COQ2P32378 372 aa6.73□□□□□ -1.33
RUP1YOR138C DCG1P32460 244 aa6.73□□□□□ -1.33
RUP1YOR138C RML2P32611 393 aa6.73□□□□□ -1.33
RUP1YOR138C YKL071WP36086 256 aa6.73□□□□□ -1.33
RUP1YOR138C BFR1P38934 470 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
RUP1YOR138C ASP1P38986 381 aaPredicted RBP6.73□□□□□ -1.33
RUP1YOR138C FAA3P39002 694 aa6.73□□□□□ -1.33
RUP1YOR138C GPI14P47088 403 aaKnown RBP6.73□□□□□ -1.33
RUP1YOR138C YGL117WP53133 265 aa6.73□□□□□ -1.33
RUP1YOR138C SNX41Q04053 625 aa6.73□□□□□ -1.33
RUP1YOR138C GRC3Q07845 632 aa6.73□□□□□ -1.33
RUP1YOR138C YOR385WQ08909 290 aa6.73□□□□□ -1.33
RUP1YOR138C ORT1Q12375 292 aa6.73□□□□□ -1.33
RUP1YOR138C TFC7Q12415 435 aa6.73□□□□□ -1.33
RUP1YOR138C ISN1Q99312 450 aa6.73□□□□□ -1.33
RUP1YOR138C AI1P03875 834 aa6.72□□□□□ -1.33
RUP1YOR138C RPS13P05756 151 aaKnown RBP6.72□□□□□ -1.33
RUP1YOR138C SGA1P08019 549 aa6.72□□□□□ -1.33
RUP1YOR138C ZRC1P20107 442 aa6.72□□□□□ -1.33
RUP1YOR138C PPH21P23594 369 aa6.72□□□□□ -1.33
RUP1YOR138C LRO1P40345 661 aa6.72□□□□□ -1.33
RUP1YOR138C SYS1P41544 203 aa6.72□□□□□ -1.33
RUP1YOR138C YIP4P53093 235 aa6.72□□□□□ -1.33
RUP1YOR138C RNH70P53331 553 aa6.72□□□□□ -1.33
RUP1YOR138C PDR16P53860 351 aaKnown RBP6.72□□□□□ -1.33
RUP1YOR138C RHO3Q00245 231 aaKnown RBP6.72□□□□□ -1.33
RUP1YOR138C APM1Q00776 475 aaPredicted RBP6.72□□□□□ -1.33
RUP1YOR138C VBA4Q04602 768 aaKnown RBP6.72□□□□□ -1.33
RUP1YOR138C MRX8Q05473 314 aa6.72□□□□□ -1.33
RUP1YOR138C HDA2Q06629 674 aa6.72□□□□□ -1.33
RUP1YOR138C YEH1Q07804 573 aa6.72□□□□□ -1.33
RUP1YOR138C YOL073CQ08232 322 aa6.72□□□□□ -1.33
RUP1YOR138C PTP1P25044 335 aa6.72□□□□□ -1.33
RUP1YOR138C LDS1P31379 325 aa6.72□□□□□ -1.33
RUP1YOR138C PRP39P39682 629 aaKnown RBP6.72□□□□□ -1.33
RUP1YOR138C YIL108WP40483 696 aaKnown RBP6.72□□□□□ -1.33
RUP1YOR138C YIR035CP40579 254 aa6.72□□□□□ -1.33
RUP1YOR138C CCC1P47818 322 aa6.72□□□□□ -1.33
RUP1YOR138C NIT3P49954 291 aa6.72□□□□□ -1.33
RUP1YOR138C BRR6P53062 197 aa6.72□□□□□ -1.33
RUP1YOR138C SMA2Q04658 369 aa6.72□□□□□ -1.33
RUP1YOR138C YPR172WQ06608 200 aa6.72□□□□□ -1.33
RUP1YOR138C FCF2Q12035 217 aaPredicted RBP6.72□□□□□ -1.33
RUP1YOR138C TY1A-LR4P0C2I8 440 aaKnown RBP6.71□□□□□ -1.33
RUP1YOR138C TY1A-DR6P0CX70 440 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-ER1P0CX71 440 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-LR2P0CX72 440 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-PLP0CX73 440 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-JR1P0CX74 440 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-LR3P0CX75 440 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-ML2P0CX76 440 aa6.71□□□□□ -1.33
RUP1YOR138C MCM1P11746 286 aa6.71□□□□□ -1.33
RUP1YOR138C URA6P15700 204 aa6.71□□□□□ -1.33
RUP1YOR138C STE18P18852 110 aa6.71□□□□□ -1.33
RUP1YOR138C YAL037WP39728 267 aa6.71□□□□□ -1.33
RUP1YOR138C AVT7P40501 490 aa6.71□□□□□ -1.33
RUP1YOR138C BXI1P48558 297 aa6.71□□□□□ -1.33
RUP1YOR138C UBP8P50102 471 aa6.71□□□□□ -1.33
RUP1YOR138C HEM25Q07534 307 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-GR1Q12085 440 aa6.71□□□□□ -1.33
RUP1YOR138C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.71□□□□□ -1.33
RUP1YOR138C TY1A-OLQ92392 440 aaKnown RBP6.71□□□□□ -1.33
RUP1YOR138C MPD2Q99316 277 aa6.71□□□□□ -1.33
RUP1YOR138C CET1O13297 549 aaPredicted RBP6.71□□□□□ -1.34
RUP1YOR138C TPI1P00942 248 aaKnown RBP6.71□□□□□ -1.34
RUP1YOR138C FUS1P11710 512 aa6.71□□□□□ -1.34
RUP1YOR138C NUP1P20676 1076 aa6.71□□□□□ -1.34
RUP1YOR138C PPZ2P33329 710 aa6.71□□□□□ -1.34
RUP1YOR138C YNL208WP40159 199 aaKnown RBP6.71□□□□□ -1.34
RUP1YOR138C MOG1P47123 218 aa6.71□□□□□ -1.34
RUP1YOR138C SSN8P47821 323 aa6.71□□□□□ -1.34
RUP1YOR138C BUL1P48524 976 aa6.71□□□□□ -1.34
RUP1YOR138C YGR012WP53206 393 aa6.71□□□□□ -1.34
RUP1YOR138C YDR344CQ05510 147 aa6.71□□□□□ -1.34
RUP1YOR138C RRT7Q07829 113 aa6.71□□□□□ -1.34
RUP1YOR138C ZEO1Q08245 113 aa6.71□□□□□ -1.34
RUP1YOR138C RPD3P32561 433 aa6.7□□□□□ -1.34
RUP1YOR138C PAD1P33751 242 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
RUP1YOR138C GPX1P36014 167 aa6.7□□□□□ -1.34
RUP1YOR138C CGR1P53188 120 aa6.7□□□□□ -1.34
RUP1YOR138C YNR061CP53747 219 aa6.7□□□□□ -1.34
RUP1YOR138C CAC2Q04199 468 aa6.7□□□□□ -1.34
RUP1YOR138C HBN1Q96VH4 193 aa6.7□□□□□ -1.34
RUP1YOR138C Q0142Q9ZZW4 58 aa6.7□□□□□ -1.34
RUP1YOR138C CHO1P08456 276 aa6.69□□□□□ -1.34
RUP1YOR138C HNM1P19807 563 aa6.69□□□□□ -1.34
RUP1YOR138C RPB8P20436 146 aa6.69□□□□□ -1.34
RUP1YOR138C MRPL27P36526 146 aaPredicted RBP6.69□□□□□ -1.34
RUP1YOR138C POP8P38208 133 aa6.69□□□□□ -1.34
RUP1YOR138C SSH1P38353 490 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C PRS3P38689 320 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C EMC5P40540 141 aa6.69□□□□□ -1.34
RUP1YOR138C NSE4P43124 402 aa6.69□□□□□ -1.34
RUP1YOR138C SRB7P47822 140 aa6.69□□□□□ -1.34
RUP1YOR138C CWC24P53769 259 aa6.69□□□□□ -1.34
RUP1YOR138C FMP41P53889 259 aaKnown RBP6.69□□□□□ -1.34
RUP1YOR138C SNO1Q03144 224 aa6.69□□□□□ -1.34
RUP1YOR138C BER1Q06688 274 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms