RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ATO2P32907 282 aa6.16□□□□□ -1.42
HDA1YNL021W YBR137WP38276 179 aa6.16□□□□□ -1.42
HDA1YNL021W SMB1P40018 196 aaKnown RBP6.16□□□□□ -1.42
HDA1YNL021W VRG4P40107 337 aa6.16□□□□□ -1.42
HDA1YNL021W LSG1P53145 640 aaKnown RBP6.16□□□□□ -1.42
HDA1YNL021W SSU72P53538 206 aaPredicted RBP6.16□□□□□ -1.42
HDA1YNL021W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
HDA1YNL021W RPN6Q12377 434 aa6.16□□□□□ -1.42
HDA1YNL021W NOT5Q12514 560 aaPredicted RBP6.16□□□□□ -1.42
HDA1YNL021W UBR2Q07963 1872 aa6.16□□□□□ -1.42
HDA1YNL021W YAR066WP0CX18 203 aa6.16□□□□□ -1.42
HDA1YNL021W YHR214WP0CX19 203 aa6.16□□□□□ -1.42
HDA1YNL021W POF1P25576 258 aa6.16□□□□□ -1.42
HDA1YNL021W YPT35P38815 214 aaKnown RBP6.16□□□□□ -1.42
HDA1YNL021W SUN4P53616 420 aa6.16□□□□□ -1.42
HDA1YNL021W CCE1Q03702 353 aa6.16□□□□□ -1.42
HDA1YNL021W CSM4Q08955 156 aa6.16□□□□□ -1.42
HDA1YNL021W DSF1P0CX08 502 aa6.15□□□□□ -1.42
HDA1YNL021W YNR073CP0CX09 502 aa6.15□□□□□ -1.42
HDA1YNL021W MRP1P10662 321 aaKnown RBP6.15□□□□□ -1.42
HDA1YNL021W NAM2P11325 894 aa6.15□□□□□ -1.42
HDA1YNL021W GCY1P14065 312 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42not detected
HDA1YNL021W YHR035WP38769 630 aa6.15□□□□□ -1.42
HDA1YNL021W MST28P39552 234 aa6.15□□□□□ -1.42
HDA1YNL021W VMA10P48836 114 aaKnown RBP6.15□□□□□ -1.42
HDA1YNL021W AVT4P50944 713 aa6.15□□□□□ -1.42
HDA1YNL021W MST27P53176 234 aa6.15□□□□□ -1.42
HDA1YNL021W CDH1P53197 566 aa6.15□□□□□ -1.42
HDA1YNL021W PIR3Q03180 325 aa6.15□□□□□ -1.42
HDA1YNL021W QCR7P00128 127 aa6.14□□□□□ -1.43
HDA1YNL021W YKL063CP35725 167 aa6.14□□□□□ -1.43
HDA1YNL021W CHS7P38843 316 aa6.14□□□□□ -1.43
HDA1YNL021W WWM1P43582 211 aaKnown RBP6.14□□□□□ -1.43
HDA1YNL021W VEL1P53058 206 aa6.14□□□□□ -1.43
HDA1YNL021W GND2P53319 492 aa6.14□□□□□ -1.43
HDA1YNL021W ORM2Q06144 216 aa6.14□□□□□ -1.43
HDA1YNL021W IRC10Q08118 586 aa6.14□□□□□ -1.43
HDA1YNL021W SLD7Q08457 257 aa6.14□□□□□ -1.43
HDA1YNL021W COX5AP00424 153 aa6.14□□□□□ -1.43
HDA1YNL021W YBR121C-AP0C5L4 52 aa6.14□□□□□ -1.43
HDA1YNL021W EXO70P19658 623 aa6.14□□□□□ -1.43
HDA1YNL021W PHA2P32452 334 aa6.14□□□□□ -1.43
HDA1YNL021W YPC1P38298 316 aa6.14□□□□□ -1.43
HDA1YNL021W PHO89P38361 574 aa6.14□□□□□ -1.43
HDA1YNL021W SEC72P39742 193 aaKnown RBP6.14□□□□□ -1.43
HDA1YNL021W THO1P40040 218 aaKnown RBP6.14□□□□□ -1.43
HDA1YNL021W TAD2P47058 250 aa6.14□□□□□ -1.43
HDA1YNL021W TVP15Q03860 143 aa6.14□□□□□ -1.43
HDA1YNL021W YLR177WQ06251 628 aa6.14□□□□□ -1.43
HDA1YNL021W YLR012CQ07927 99 aa6.14□□□□□ -1.43
HDA1YNL021W POM33Q12164 279 aa6.14□□□□□ -1.43
HDA1YNL021W RPL27AP0C2H6 136 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W RPL27BP0C2H7 136 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W YAP1P19880 650 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W RBK1P25332 333 aa6.13□□□□□ -1.43
HDA1YNL021W RFA3P26755 122 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W GLC7P32598 312 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W YHI9P38765 294 aa6.13□□□□□ -1.43
HDA1YNL021W HAT2P39984 401 aa6.13□□□□□ -1.43
HDA1YNL021W UFE1P41834 346 aa6.13□□□□□ -1.43
HDA1YNL021W TES1P41903 349 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W SNX4P47057 423 aa6.13□□□□□ -1.43
HDA1YNL021W IBA57P47158 497 aa6.13□□□□□ -1.43
HDA1YNL021W PRP24P49960 444 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W CPD1P53314 239 aa6.13□□□□□ -1.43
HDA1YNL021W BCH1Q05029 724 aa6.13□□□□□ -1.43
HDA1YNL021W LDB18Q07887 179 aa6.13□□□□□ -1.43
HDA1YNL021W YEH2Q07950 538 aa6.13□□□□□ -1.43
HDA1YNL021W OCA6Q12454 224 aa6.13□□□□□ -1.43
HDA1YNL021W EHD3P28817 500 aa6.13□□□□□ -1.43
HDA1YNL021W YBR241CP38142 488 aa6.13□□□□□ -1.43
HDA1YNL021W MRP21P38175 177 aa6.13□□□□□ -1.43
HDA1YNL021W BMT2P38278 337 aa6.13□□□□□ -1.43
HDA1YNL021W SEO1P39709 593 aa6.13□□□□□ -1.43
HDA1YNL021W SFH5P47008 294 aa6.13□□□□□ -1.43
HDA1YNL021W LSM1P47017 172 aaKnown RBP6.13□□□□□ -1.43
HDA1YNL021W NIF3P53081 288 aa6.13□□□□□ -1.43
HDA1YNL021W FMN1Q03778 218 aa6.13□□□□□ -1.43
HDA1YNL021W NDE2Q07500 545 aa6.13□□□□□ -1.43
HDA1YNL021W YMR030W-AQ3E760 96 aa6.13□□□□□ -1.43
HDA1YNL021W MTF1P14908 341 aaKnown RBP6.12□□□□□ -1.43
HDA1YNL021W HSP26P15992 214 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
HDA1YNL021W SEC14P24280 304 aaKnown RBP6.12□□□□□ -1.43
HDA1YNL021W YCR102CP25608 368 aa6.12□□□□□ -1.43
HDA1YNL021W CSE1P33307 960 aa6.12□□□□□ -1.43
HDA1YNL021W FZO1P38297 855 aa6.12□□□□□ -1.43
HDA1YNL021W ICE2P40499 491 aa6.12□□□□□ -1.43
HDA1YNL021W MRM2P53123 320 aa6.12□□□□□ -1.43
HDA1YNL021W MTM1P53320 366 aa6.12□□□□□ -1.43
HDA1YNL021W GIT1P25346 518 aa6.11□□□□□ -1.43
HDA1YNL021W KAR9P32526 644 aa6.11□□□□□ -1.43
HDA1YNL021W SGE1P33335 543 aa6.11□□□□□ -1.43
HDA1YNL021W SPO23P33757 523 aa6.11□□□□□ -1.43
HDA1YNL021W MCH2P36032 473 aa6.11□□□□□ -1.43
HDA1YNL021W MED8P38304 223 aa6.11□□□□□ -1.43
HDA1YNL021W ATG12P38316 186 aa6.11□□□□□ -1.43
HDA1YNL021W YJR030CP47101 745 aa6.11□□□□□ -1.43
HDA1YNL021W VAC7P53950 1165 aa6.11□□□□□ -1.43
HDA1YNL021W YDL114WQ07530 308 aa6.11□□□□□ -1.43
HDA1YNL021W DAP1Q12091 152 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 119.9 ms