RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W MLP2P40457 1679 aa2□□□□□ -2.09
VPS38YLR360W YEL009C-AA0A023PZF2 135 aa1.99□□□□□ -2.09
VPS38YLR360W YMR316C-AI2HB70 103 aa1.99□□□□□ -2.09
VPS38YLR360W ATG15P25641 520 aa1.99□□□□□ -2.09
VPS38YLR360W ERG2P32352 222 aa1.99□□□□□ -2.09
VPS38YLR360W COY1P34237 679 aa1.99□□□□□ -2.09
VPS38YLR360W MNN5P46982 586 aa1.99□□□□□ -2.09
VPS38YLR360W YOL019WQ08157 551 aa1.99□□□□□ -2.09
VPS38YLR360W XRN1P22147 1528 aaKnown RBP1.99□□□□□ -2.09
VPS38YLR360W THO2P53552 1597 aaKnown RBP1.99□□□□□ -2.09
VPS38YLR360W PET494P07390 489 aaPredicted RBP1.98□□□□□ -2.09
VPS38YLR360W UGA1P17649 471 aa1.98□□□□□ -2.09
VPS38YLR360W ICL1P28240 557 aaPredicted RBP1.98□□□□□ -2.09
VPS38YLR360W OPY1P38271 328 aa1.98□□□□□ -2.09
VPS38YLR360W YGP1P38616 354 aaKnown RBP1.98□□□□□ -2.09
VPS38YLR360W YJR141WP47172 347 aaPredicted RBP1.98□□□□□ -2.09
VPS38YLR360W OST3P48439 350 aa1.98□□□□□ -2.09
VPS38YLR360W PNC1P53184 216 aaKnown RBP1.98□□□□□ -2.09
VPS38YLR360W YPL039WQ03080 316 aa1.98□□□□□ -2.09
VPS38YLR360W VPS60Q03390 229 aa1.98□□□□□ -2.09
VPS38YLR360W MMS22Q06164 1454 aa1.98□□□□□ -2.09
VPS38YLR360W CPD1P53314 239 aa1.97□□□□□ -2.09
VPS38YLR360W FMP41P53889 259 aaKnown RBP1.97□□□□□ -2.09
VPS38YLR360W SPO19Q03029 223 aa1.97□□□□□ -2.09
VPS38YLR360W GRH1Q04410 372 aaKnown RBP1.97□□□□□ -2.09
VPS38YLR360W ISD11Q6Q560 94 aa1.97□□□□□ -2.09
VPS38YLR360W CFT1Q06632 1357 aaKnown RBP1.97□□□□□ -2.09
VPS38YLR360W TOP2P06786 1428 aaKnown RBP1.97□□□□□ -2.09
VPS38YLR360W CHD1P32657 1468 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-LR1P0C2J3 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-FP0CX63 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-GR2P0CX64 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-CP25384 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-DR2Q03494 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY1B-DR1Q03855 1755 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-DR3Q07791 1770 aaKnown RBP1.97□□□□□ -2.09
VPS38YLR360W TY2B-OR1Q12113 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-DR1Q12472 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-BQ12491 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY2B-OR2Q12501 1770 aa1.97□□□□□ -2.09
VPS38YLR360W TY1B-DR3Q99231 1755 aa1.97□□□□□ -2.09
VPS38YLR360W LOC1P43586 204 aaPredicted RBP1.96□□□□□ -2.1
VPS38YLR360W PEX31P53203 462 aa1.96□□□□□ -2.1
VPS38YLR360W FCF1Q05498 189 aaPredicted RBP1.96□□□□□ -2.1
VPS38YLR360W SUE1Q06524 206 aa1.96□□□□□ -2.1
VPS38YLR360W PLB3Q08108 686 aa1.96□□□□□ -2.1
VPS38YLR360W AGC1Q12482 902 aa1.96□□□□□ -2.1
VPS38YLR360W YPK9Q12697 1472 aa1.95□□□□□ -2.1
VPS38YLR360W MMS1Q06211 1407 aa1.95□□□□□ -2.1
VPS38YLR360W CAM1P29547 415 aaKnown RBP1.95□□□□□ -2.1
VPS38YLR360W CLB6P32943 380 aa1.95□□□□□ -2.1
VPS38YLR360W ARN2P38724 620 aa1.95□□□□□ -2.1
VPS38YLR360W VPS45P38932 577 aa1.95□□□□□ -2.1
VPS38YLR360W YNL260CP53846 198 aa1.95□□□□□ -2.1
VPS38YLR360W YNL050CP53952 270 aa1.95□□□□□ -2.1
VPS38YLR360W BCP1Q06338 283 aa1.95□□□□□ -2.1
VPS38YLR360W YBL112CQ3E7Y4 105 aa1.95□□□□□ -2.1
VPS38YLR360W GCN2P15442 1659 aa1.95□□□□□ -2.1
VPS38YLR360W IRC20Q06554 1556 aa1.95□□□□□ -2.1
VPS38YLR360W SRB8P25648 1427 aa1.95□□□□□ -2.1
VPS38YLR360W CSG2P35206 410 aa1.94□□□□□ -2.1
VPS38YLR360W YHI9P38765 294 aa1.94□□□□□ -2.1
VPS38YLR360W YGL185CP53100 379 aa1.94□□□□□ -2.1
VPS38YLR360W YMR166CQ03829 368 aa1.94□□□□□ -2.1
VPS38YLR360W MYO5Q04439 1219 aaKnown RBP1.94□□□□□ -2.1
VPS38YLR360W CTS2Q06350 511 aa1.94□□□□□ -2.1
VPS38YLR360W VPS68Q12016 184 aa1.94□□□□□ -2.1
VPS38YLR360W TY3A-GQ12173 290 aa1.94□□□□□ -2.1
VPS38YLR360W TY3A-IQ99219 290 aa1.94□□□□□ -2.1
VPS38YLR360W SPP41P38904 1435 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-HO13535 1793 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-DR5P0C2I2 1755 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-DR6P0C2I3 1755 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-LR2P0C2I5 1755 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-LR3P0C2I6 1755 aaKnown RBP1.94□□□□□ -2.1
VPS38YLR360W TY1B-PR1P0C2I9 1755 aaKnown RBP1.94□□□□□ -2.1
VPS38YLR360W TY1B-PR2P0C2J0 1756 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-PR3P0C2J1 1755 aaKnown RBP1.94□□□□□ -2.1
VPS38YLR360W TY1B-JR1P47098 1755 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-ML2Q03434 1755 aaKnown RBP1.94□□□□□ -2.1
VPS38YLR360W TY1B-ER1Q03612 1755 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-ML1Q04711 1755 aaKnown RBP1.94□□□□□ -2.1
VPS38YLR360W TY1B-GR2Q12269 1755 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-OLQ12273 1755 aa1.94□□□□□ -2.1
VPS38YLR360W TY1B-PLQ12414 1755 aaKnown RBP1.94□□□□□ -2.1
VPS38YLR360W TDH1P00360 332 aaKnown RBP1.93□□□□□ -2.1
VPS38YLR360W RPS3P05750 240 aaKnown RBP1.93□□□□□ -2.1
VPS38YLR360W RAD10P06838 210 aa1.93□□□□□ -2.1
VPS38YLR360W YSR3P23501 404 aa1.93□□□□□ -2.1
VPS38YLR360W GCD14P46959 383 aaPredicted RBP1.93□□□□□ -2.1
VPS38YLR360W IBA57P47158 497 aa1.93□□□□□ -2.1
VPS38YLR360W YJR146WP47174 117 aa1.93□□□□□ -2.1
VPS38YLR360W ECM18Q04623 453 aa1.93□□□□□ -2.1
VPS38YLR360W ERV41Q04651 352 aa1.93□□□□□ -2.1
VPS38YLR360W SPO77Q06134 477 aa1.93□□□□□ -2.1
VPS38YLR360W SFH1Q06168 426 aa1.93□□□□□ -2.1
VPS38YLR360W MYO2P19524 1574 aaKnown RBP1.93□□□□□ -2.1
VPS38YLR360W RPL26AP05743 127 aaKnown RBP1.92□□□□□ -2.1
VPS38YLR360W RPC40P07703 335 aaKnown RBP1.92□□□□□ -2.1
VPS38YLR360W DPM1P14020 267 aaKnown RBP1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 157 ms