RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W SGT1Q08446 395 aa1.81□□□□□ -2.12
RTT107YHR154W DDC1Q08949 612 aa1.81□□□□□ -2.12
RTT107YHR154W ICT1Q12385 394 aa1.81□□□□□ -2.12
RTT107YHR154W SSC1P0CS90 654 aaKnown RBP1.8□□□□□ -2.12
RTT107YHR154W CAP2P13517 287 aa1.8□□□□□ -2.12
RTT107YHR154W APD1P38281 316 aa1.8□□□□□ -2.12
RTT107YHR154W FZO1P38297 855 aa1.8□□□□□ -2.12
RTT107YHR154W EGD2P38879 174 aaKnown RBP1.8□□□□□ -2.12
RTT107YHR154W MET30P39014 640 aa1.8□□□□□ -2.12
RTT107YHR154W DDI1P40087 428 aa1.8□□□□□ -2.12
RTT107YHR154W AZF1P41696 914 aa1.8□□□□□ -2.12
RTT107YHR154W GAT1P43574 510 aa1.8□□□□□ -2.12
RTT107YHR154W IRC7P43623 340 aa1.8□□□□□ -2.12
RTT107YHR154W SWC4P53201 476 aa1.8□□□□□ -2.12
RTT107YHR154W GND2P53319 492 aa1.8□□□□□ -2.12
RTT107YHR154W EAF7P53911 425 aaKnown RBP1.8□□□□□ -2.12
RTT107YHR154W DIA1P54005 336 aa1.8□□□□□ -2.12
RTT107YHR154W YPL077CQ02831 240 aa1.8□□□□□ -2.12
RTT107YHR154W PRM6Q04705 352 aa1.8□□□□□ -2.12
RTT107YHR154W SPC2Q04969 178 aa1.8□□□□□ -2.12
RTT107YHR154W SRL2Q12020 392 aa1.8□□□□□ -2.12
RTT107YHR154W ACF2Q12168 779 aa1.8□□□□□ -2.12
RTT107YHR154W RDL1Q12305 139 aaKnown RBP1.8□□□□□ -2.12
RTT107YHR154W JLP1Q12358 412 aa1.8□□□□□ -2.12
RTT107YHR154W QCR2P07257 368 aa1.8□□□□□ -2.12
RTT107YHR154W POF1P25576 258 aa1.8□□□□□ -2.12
RTT107YHR154W SPT4P32914 102 aaPredicted RBP1.8□□□□□ -2.12
RTT107YHR154W OPY1P38271 328 aa1.8□□□□□ -2.12
RTT107YHR154W SDS24P38314 527 aa1.8□□□□□ -2.12
RTT107YHR154W PHO90P39535 881 aa1.8□□□□□ -2.12
RTT107YHR154W MTM1P53320 366 aa1.8□□□□□ -2.12
RTT107YHR154W MTQ1P53944 314 aa1.8□□□□□ -2.12
RTT107YHR154W NUP100Q02629 959 aa1.8□□□□□ -2.12
RTT107YHR154W YML096WQ04489 525 aa1.8□□□□□ -2.12
RTT107YHR154W SPO77Q06134 477 aa1.8□□□□□ -2.12
RTT107YHR154W NDE2Q07500 545 aa1.8□□□□□ -2.12
RTT107YHR154W YLR108CQ12259 485 aa1.8□□□□□ -2.12
RTT107YHR154W SNU23Q12368 194 aaPredicted RBP1.8□□□□□ -2.12
RTT107YHR154W YPR064WQ12492 139 aa1.8□□□□□ -2.12
RTT107YHR154W CTA1P15202 515 aa1.79□□□□□ -2.12
RTT107YHR154W YEF1P32622 495 aa1.79□□□□□ -2.12
RTT107YHR154W MRPL6P32904 214 aa1.79□□□□□ -2.12
RTT107YHR154W VAM7P32912 316 aa1.79□□□□□ -2.12
RTT107YHR154W LOS1P33418 1100 aaPredicted RBP1.79□□□□□ -2.12
RTT107YHR154W VPS21P36017 210 aaKnown RBP1.79□□□□□ -2.12
RTT107YHR154W ECM13P38195 257 aa1.79□□□□□ -2.12
RTT107YHR154W PRS2P38620 318 aaKnown RBP1.79□□□□□ -2.12
RTT107YHR154W SUR2P38992 349 aa1.79□□□□□ -2.12
RTT107YHR154W SOP4P39543 234 aaPredicted RBP1.79□□□□□ -2.12
RTT107YHR154W RTT101P47050 842 aa1.79□□□□□ -2.12
RTT107YHR154W CCC1P47818 322 aa1.79□□□□□ -2.12
RTT107YHR154W USE1P53146 245 aa1.79□□□□□ -2.12
RTT107YHR154W PIR3Q03180 325 aa1.79□□□□□ -2.12
RTT107YHR154W RTT103Q05543 409 aa1.79□□□□□ -2.12
RTT107YHR154W YLR031WQ07978 186 aa1.79□□□□□ -2.12
RTT107YHR154W AFT2Q08957 416 aa1.79□□□□□ -2.12
RTT107YHR154W ASP3-2P0CX77 362 aa1.79□□□□□ -2.12
RTT107YHR154W ASP3-3P0CX78 362 aa1.79□□□□□ -2.12
RTT107YHR154W ASP3-4P0CX79 362 aa1.79□□□□□ -2.12
RTT107YHR154W ASP3-1P0CZ17 362 aa1.79□□□□□ -2.12
RTT107YHR154W PPH21P23594 369 aa1.79□□□□□ -2.12
RTT107YHR154W YCR007CP25354 239 aa1.79□□□□□ -2.12
RTT107YHR154W TIP1P27654 210 aaPredicted RBP1.79□□□□□ -2.12
RTT107YHR154W AGA1P32323 725 aa1.79□□□□□ -2.12
RTT107YHR154W GPX2P38143 162 aa1.79□□□□□ -2.12
RTT107YHR154W YPC1P38298 316 aa1.79□□□□□ -2.12
RTT107YHR154W YHR035WP38769 630 aa1.79□□□□□ -2.12
RTT107YHR154W CIN5P40917 295 aa1.79□□□□□ -2.12
RTT107YHR154W YAR1P46683 200 aa1.79□□□□□ -2.12
RTT107YHR154W AVT4P50944 713 aa1.79□□□□□ -2.12
RTT107YHR154W GOR1P53839 350 aa1.79□□□□□ -2.12
RTT107YHR154W YDL109CQ12103 647 aa1.79□□□□□ -2.12
RTT107YHR154W EAF3Q12432 401 aa1.79□□□□□ -2.12
RTT107YHR154W RPS28BP0C0X0 67 aaKnown RBP1.79□□□□□ -2.12
RTT107YHR154W NAM2P11325 894 aa1.79□□□□□ -2.12
RTT107YHR154W HEM15P16622 393 aa1.79□□□□□ -2.12
RTT107YHR154W COQ3P27680 312 aa1.79□□□□□ -2.12
RTT107YHR154W ANR2P36090 516 aaPredicted RBP1.79□□□□□ -2.12
RTT107YHR154W RIB5P38145 238 aa1.79□□□□□ -2.12
RTT107YHR154W AVT2P39981 480 aa1.79□□□□□ -2.12
RTT107YHR154W YIL029CP40538 142 aa1.79□□□□□ -2.12
RTT107YHR154W NCA3P46955 337 aa1.79□□□□□ -2.12
RTT107YHR154W SFH5P47008 294 aa1.79□□□□□ -2.12
RTT107YHR154W GLG2P47011 380 aa1.79□□□□□ -2.12
RTT107YHR154W YNR048WP53740 393 aa1.79□□□□□ -2.12
RTT107YHR154W YMR034CQ05131 434 aaPredicted RBP1.79□□□□□ -2.12
RTT107YHR154W CDC123Q05791 360 aa1.79□□□□□ -2.12
RTT107YHR154W SFH1Q06168 426 aa1.79□□□□□ -2.12
RTT107YHR154W ATG17Q06410 417 aa1.79□□□□□ -2.12
RTT107YHR154W BSC1Q12140 328 aa1.79□□□□□ -2.12
RTT107YHR154W MSL5Q12186 476 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
RTT107YHR154W RPS28AQ3E7X9 67 aaPredicted RBP1.79□□□□□ -2.12
RTT107YHR154W PUT1P09368 476 aa1.78□□□□□ -2.12
RTT107YHR154W RPL31AP0C2H8 113 aaKnown RBP1.78□□□□□ -2.12
RTT107YHR154W RPS5P26783 225 aaKnown RBP1.78□□□□□ -2.12
RTT107YHR154W YBR241CP38142 488 aa1.78□□□□□ -2.12
RTT107YHR154W YAT2P40017 923 aa1.78□□□□□ -2.12
RTT107YHR154W SIM1P40472 476 aa1.78□□□□□ -2.12
RTT107YHR154W RTS2P40962 232 aa1.78□□□□□ -2.12
RTT107YHR154W GWT1P47026 490 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms