RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W ITR1P30605 584 aa4.51□□□□□ -1.69
MSH1YHR120W ACB1P31787 87 aa4.51□□□□□ -1.69
MSH1YHR120W YMR144WP40214 342 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W YIL165CP40446 119 aa4.51□□□□□ -1.69
MSH1YHR120W HAM1P47119 197 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W GNP1P48813 663 aa4.51□□□□□ -1.69
MSH1YHR120W YKR011CQ02209 353 aa4.51□□□□□ -1.69
MSH1YHR120W EKI1Q03764 534 aa4.51□□□□□ -1.69
MSH1YHR120W GAS2Q06135 555 aa4.51□□□□□ -1.69
MSH1YHR120W PEX30Q06169 523 aa4.51□□□□□ -1.69
MSH1YHR120W KEI1Q06346 221 aa4.51□□□□□ -1.69
MSH1YHR120W YLR352WQ06479 807 aa4.51□□□□□ -1.69
MSH1YHR120W YPR127WQ06494 345 aa4.51□□□□□ -1.69
MSH1YHR120W BTS1Q12051 335 aa4.51□□□□□ -1.69
MSH1YHR120W INP53Q12271 1107 aa4.51□□□□□ -1.69
MSH1YHR120W DET1Q99288 334 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W Q0144Q9ZZW2 109 aa4.51□□□□□ -1.69
MSH1YHR120W RPS18AP0CX55 146 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W RPS18BP0CX56 146 aaPredicted RBP4.51□□□□□ -1.69
MSH1YHR120W PDA1P16387 420 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W CNB1P25296 175 aa4.51□□□□□ -1.69
MSH1YHR120W YER010CP40011 234 aa4.51□□□□□ -1.69
MSH1YHR120W KAP120Q02932 1032 aa4.51□□□□□ -1.69
MSH1YHR120W SNT309Q06091 175 aaPredicted RBP4.51□□□□□ -1.69
MSH1YHR120W BRX1Q08235 291 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W CTA1P15202 515 aa4.51□□□□□ -1.69
MSH1YHR120W YCL002CP25565 263 aa4.51□□□□□ -1.69
MSH1YHR120W YCR100CP25606 316 aa4.51□□□□□ -1.69
MSH1YHR120W YKR073CP36153 106 aa4.51□□□□□ -1.69
MSH1YHR120W REE1P40893 198 aa4.51□□□□□ -1.69
MSH1YHR120W LOH1P47055 219 aa4.51□□□□□ -1.69
MSH1YHR120W AIM25P47140 327 aa4.51□□□□□ -1.69
MSH1YHR120W PPT1P53043 513 aa4.51□□□□□ -1.69
MSH1YHR120W DOC1P53068 250 aa4.51□□□□□ -1.69
MSH1YHR120W RPL6AQ02326 176 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W SDC1Q03323 175 aa4.51□□□□□ -1.69
MSH1YHR120W YMR315WQ04869 349 aaKnown RBP4.51□□□□□ -1.69
MSH1YHR120W HDA2Q06629 674 aa4.51□□□□□ -1.69
MSH1YHR120W SWM1Q12379 170 aa4.51□□□□□ -1.69
MSH1YHR120W HXT2P23585 541 aa4.5□□□□□ -1.69
MSH1YHR120W MTH1P35198 433 aa4.5□□□□□ -1.69
MSH1YHR120W APD1P38281 316 aa4.5□□□□□ -1.69
MSH1YHR120W MTC4P38335 694 aaKnown RBP4.5□□□□□ -1.69
MSH1YHR120W OSH7P38755 437 aa4.5□□□□□ -1.69
MSH1YHR120W YER184CP39961 794 aa4.5□□□□□ -1.69
MSH1YHR120W PRY1P47032 299 aa4.5□□□□□ -1.69
MSH1YHR120W ASI3P53983 676 aa4.5□□□□□ -1.69
MSH1YHR120W ENB1Q08299 606 aa4.5□□□□□ -1.69
MSH1YHR120W YOR385WQ08909 290 aa4.5□□□□□ -1.69
MSH1YHR120W YRA1Q12159 226 aaKnown RBP4.5□□□□□ -1.69
MSH1YHR120W COX17Q12287 69 aa4.5□□□□□ -1.69
MSH1YHR120W YDL007C-AQ2V2Q0 85 aa4.5□□□□□ -1.69
MSH1YHR120W FSH3Q99369 266 aa4.5□□□□□ -1.69
MSH1YHR120W SSA3P09435 649 aaKnown RBP4.5□□□□□ -1.69
MSH1YHR120W NFS1P25374 497 aa4.5□□□□□ -1.69
MSH1YHR120W FUN19P28003 413 aaPredicted RBP4.5□□□□□ -1.69
MSH1YHR120W ARC19P33204 171 aaKnown RBP4.5□□□□□ -1.69
MSH1YHR120W RFC4P40339 323 aaKnown RBP4.5□□□□□ -1.69
MSH1YHR120W HSV2P50079 448 aaPredicted RBP4.5□□□□□ -1.69
MSH1YHR120W YGL204CP53089 101 aa4.5□□□□□ -1.69
MSH1YHR120W GTF1P53260 183 aaPredicted RBP4.5□□□□□ -1.69
MSH1YHR120W SAY1P53324 424 aa4.5□□□□□ -1.69
MSH1YHR120W SNX41Q04053 625 aa4.5□□□□□ -1.69
MSH1YHR120W LUC7Q07508 261 aaPredicted RBP4.5□□□□□ -1.69
MSH1YHR120W AVO1Q08236 1176 aa4.5□□□□□ -1.69
MSH1YHR120W MCP1Q12106 302 aa4.5□□□□□ -1.69
MSH1YHR120W MRP2P10663 115 aaPredicted RBP4.49□□□□□ -1.69
MSH1YHR120W RNA14P25298 677 aaKnown RBP4.49□□□□□ -1.69
MSH1YHR120W PRE4P30657 266 aa4.49□□□□□ -1.69
MSH1YHR120W YEF1P32622 495 aa4.49□□□□□ -1.69
MSH1YHR120W SFK1P35735 353 aa4.49□□□□□ -1.69
MSH1YHR120W TIM44Q01852 431 aa4.49□□□□□ -1.69
MSH1YHR120W YMR252CQ04814 134 aa4.49□□□□□ -1.69
MSH1YHR120W TDH1P00360 332 aaKnown RBP4.49□□□□□ -1.69
MSH1YHR120W PUP1P25043 261 aa4.49□□□□□ -1.69
MSH1YHR120W PUT3P25502 979 aaPredicted RBP4.49□□□□□ -1.69
MSH1YHR120W YCR061WP25639 631 aa4.49□□□□□ -1.69
MSH1YHR120W EHD3P28817 500 aa4.49□□□□□ -1.69
MSH1YHR120W COQ2P32378 372 aa4.49□□□□□ -1.69
MSH1YHR120W YKL077WP36081 392 aa4.49□□□□□ -1.69
MSH1YHR120W PAM16P42949 149 aa4.49□□□□□ -1.69
MSH1YHR120W VBA1Q04301 562 aa4.49□□□□□ -1.69
MSH1YHR120W HNT3Q08702 217 aa4.49□□□□□ -1.69
MSH1YHR120W REP2P03872 296 aa4.48□□□□□ -1.69
MSH1YHR120W SCO1P23833 295 aa4.48□□□□□ -1.69
MSH1YHR120W YCP4P25349 247 aaKnown RBP4.48□□□□□ -1.69
MSH1YHR120W YPC1P38298 316 aa4.48□□□□□ -1.69
MSH1YHR120W COS8P38723 381 aa4.48□□□□□ -1.69
MSH1YHR120W YHR122WP38829 231 aa4.48□□□□□ -1.69
MSH1YHR120W YHR180WP38868 163 aa4.48□□□□□ -1.69
MSH1YHR120W SMB1P40018 196 aaKnown RBP4.48□□□□□ -1.69
MSH1YHR120W GLR1P41921 483 aaKnown RBP4.48□□□□□ -1.69
MSH1YHR120W YGR066CP53242 292 aa4.48□□□□□ -1.69
MSH1YHR120W UTP21Q06078 939 aaPredicted RBP4.48□□□□□ -1.69
MSH1YHR120W RSC58Q07979 502 aa4.48□□□□□ -1.69
MSH1YHR120W WTM2Q12206 467 aa4.48□□□□□ -1.69
MSH1YHR120W TRM13Q12383 476 aa4.48□□□□□ -1.69
MSH1YHR120W DFG16Q99234 619 aa4.48□□□□□ -1.69
MSH1YHR120W CHO1P08456 276 aa4.48□□□□□ -1.69
MSH1YHR120W FUS3P16892 353 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms