RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	AGA2	P32781	87 aa		1.5	□□□□□ -2.17
DOT6	YER088C	RCK1	P38622	512 aa		1.5	□□□□□ -2.17
DOT6	YER088C	PFS2	P42841	465 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	GLG2	P47011	380 aa		1.5	□□□□□ -2.17
DOT6	YER088C	CPR7	P47103	393 aa		1.5	□□□□□ -2.17
DOT6	YER088C	COG7	P53195	279 aa		1.5	□□□□□ -2.17
DOT6	YER088C	EGD1	Q02642	157 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	RRB1	Q04225	511 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	GRX8	Q05926	109 aa		1.5	□□□□□ -2.17
DOT6	YER088C	STE23	Q06010	1027 aa		1.5	□□□□□ -2.17
DOT6	YER088C	ECM19	Q06011	112 aa		1.5	□□□□□ -2.17
DOT6	YER088C	YOL029C	Q08187	201 aa		1.5	□□□□□ -2.17
DOT6	YER088C	MMT2	Q08970	484 aa		1.5	□□□□□ -2.17
DOT6	YER088C	SPO24	Q3E752	67 aa		1.5	□□□□□ -2.17
DOT6	YER088C	REP1	P03871	373 aa		1.5	□□□□□ -2.17
DOT6	YER088C	RPS3	P05750	240 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	CYR1	P08678	2026 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	BGL2	P15703	313 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	OM45	P16547	393 aa		1.5	□□□□□ -2.17
DOT6	YER088C	RAD23	P32628	398 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	TAE1	P38340	232 aa		1.5	□□□□□ -2.17
DOT6	YER088C	SMF2	P38778	549 aa		1.5	□□□□□ -2.17
DOT6	YER088C	PRP39	P39682	629 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	YNL320W	P42840	284 aa		1.5	□□□□□ -2.17
DOT6	YER088C	ARO80	Q04052	950 aa		1.5	□□□□□ -2.17
DOT6	YER088C	KAP95	Q06142	861 aa	Known RBP	1.5	□□□□□ -2.17
DOT6	YER088C	YLR030W	Q07967	263 aa		1.5	□□□□□ -2.17
DOT6	YER088C	VPS68	Q12016	184 aa		1.5	□□□□□ -2.17
DOT6	YER088C	GLE1	Q12315	538 aa		1.5	□□□□□ -2.17
DOT6	YER088C	YDR262W	Q12331	272 aa		1.5	□□□□□ -2.17
DOT6	YER088C	RPL22A	P05749	121 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	FUS3	P16892	353 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	ATG15	P25641	520 aa		1.49	□□□□□ -2.17
DOT6	YER088C	RPB9	P27999	122 aa		1.49	□□□□□ -2.17
DOT6	YER088C	URA10	P30402	227 aa		1.49	□□□□□ -2.17
DOT6	YER088C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	1.49	□□□□□ -2.17	not detected
DOT6	YER088C	CSG2	P35206	410 aa		1.49	□□□□□ -2.17
DOT6	YER088C	MRPL37	P36532	105 aa		1.49	□□□□□ -2.17
DOT6	YER088C	EFM1	P38732	585 aa		1.49	□□□□□ -2.17
DOT6	YER088C	TRR2	P38816	342 aa		1.49	□□□□□ -2.17
DOT6	YER088C	PRM9	P39551	298 aa		1.49	□□□□□ -2.17
DOT6	YER088C	PEX31	P53203	462 aa		1.49	□□□□□ -2.17
DOT6	YER088C	PRO2	P54885	456 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	INP2	Q03824	705 aa		1.49	□□□□□ -2.17
DOT6	YER088C	YLR297W	Q05899	129 aa		1.49	□□□□□ -2.17
DOT6	YER088C	YPR114W	Q06107	315 aa		1.49	□□□□□ -2.17
DOT6	YER088C	ATG10	Q07879	167 aa		1.49	□□□□□ -2.17
DOT6	YER088C	MIM1	Q08176	113 aa		1.49	□□□□□ -2.17
DOT6	YER088C	PEX11	Q12462	236 aa		1.49	□□□□□ -2.17
DOT6	YER088C	FAS1	P07149	2051 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	SSA3	P09435	649 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	RNR2	P09938	399 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	YLL053C	P0CD98	152 aa		1.49	□□□□□ -2.17
DOT6	YER088C	FMT1	P32785	401 aa		1.49	□□□□□ -2.17
DOT6	YER088C	CDC13	P32797	924 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	RFT1	P38206	574 aa	Predicted RBP	1.49	□□□□□ -2.17
DOT6	YER088C	FRT2	P39734	528 aa		1.49	□□□□□ -2.17
DOT6	YER088C	EDC3	P39998	551 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	NBP35	P52920	328 aa		1.49	□□□□□ -2.17
DOT6	YER088C	EMC4	P53073	190 aa		1.49	□□□□□ -2.17
DOT6	YER088C	ZRG17	P53735	605 aa		1.49	□□□□□ -2.17
DOT6	YER088C	RHO3	Q00245	231 aa	Known RBP	1.49	□□□□□ -2.17
DOT6	YER088C	YMR244W	Q04018	355 aa		1.49	□□□□□ -2.17
DOT6	YER088C	PLB3	Q08108	686 aa		1.49	□□□□□ -2.17
DOT6	YER088C	PRM4	Q12498	284 aa		1.49	□□□□□ -2.17
DOT6	YER088C	MDM35	O60200	86 aa		1.48	□□□□□ -2.17
DOT6	YER088C	GPI8	P49018	411 aa		1.48	□□□□□ -2.17
DOT6	YER088C	TAF6	P53040	516 aa		1.48	□□□□□ -2.17
DOT6	YER088C	HOP2	P53187	214 aa		1.48	□□□□□ -2.17
DOT6	YER088C	SWC4	P53201	476 aa		1.48	□□□□□ -2.17
DOT6	YER088C	APC4	Q04601	652 aa		1.48	□□□□□ -2.17
DOT6	YER088C	RFM1	Q12192	310 aa		1.48	□□□□□ -2.17
DOT6	YER088C	PRM7	Q12459	698 aa		1.48	□□□□□ -2.17
DOT6	YER088C	DFM1	Q12743	341 aa	Known RBP	1.48	□□□□□ -2.17
DOT6	YER088C	STE2	D6VTK4	431 aa		1.47	□□□□□ -2.17
DOT6	YER088C	HIS1	P00498	297 aa	Known RBP	1.47	□□□□□ -2.17
DOT6	YER088C	GAL3	P13045	520 aa		1.47	□□□□□ -2.17
DOT6	YER088C	MET16	P18408	261 aa	Predicted RBP	1.47	□□□□□ -2.17
DOT6	YER088C	SRB2	P34162	210 aa		1.47	□□□□□ -2.17
DOT6	YER088C	YKL071W	P36086	256 aa		1.47	□□□□□ -2.17
DOT6	YER088C	MRPL15	P36523	253 aa		1.47	□□□□□ -2.17
DOT6	YER088C	PCH2	P38126	564 aa		1.47	□□□□□ -2.17
DOT6	YER088C	URA8	P38627	578 aa	Predicted RBP	1.47	□□□□□ -2.17
DOT6	YER088C	BDH1	P39714	382 aa		1.47	□□□□□ -2.17
DOT6	YER088C	COS4	P43542	379 aa		1.47	□□□□□ -2.17
DOT6	YER088C	PMT4	P46971	762 aa		1.47	□□□□□ -2.17
DOT6	YER088C	ASG7	P46993	209 aa		1.47	□□□□□ -2.17
DOT6	YER088C	YGL114W	P53134	725 aa		1.47	□□□□□ -2.17
DOT6	YER088C	SDS23	P53172	527 aa		1.47	□□□□□ -2.17
DOT6	YER088C	PXR1	P53335	271 aa	Predicted RBP	1.47	□□□□□ -2.17
DOT6	YER088C	SMD1	Q02260	146 aa	Predicted RBP	1.47	□□□□□ -2.17
DOT6	YER088C	MGR3	Q04472	501 aa		1.47	□□□□□ -2.17
DOT6	YER088C	REX3	Q12090	404 aa		1.47	□□□□□ -2.17
DOT6	YER088C	YDL211C	Q12121	372 aa		1.47	□□□□□ -2.17
DOT6	YER088C	VPS63	O13549	108 aa		1.47	□□□□□ -2.17
DOT6	YER088C	CTA1	P15202	515 aa		1.47	□□□□□ -2.17
DOT6	YER088C	YKL187C	P34231	750 aa		1.47	□□□□□ -2.17
DOT6	YER088C	PET8	P38921	284 aa		1.47	□□□□□ -2.17
DOT6	YER088C	YNL040W	P53960	456 aa	Predicted RBP	1.47	□□□□□ -2.17
DOT6	YER088C	ACT1	P60010	375 aa	Known RBP	1.47	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms