RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C VBA1Q04301 562 aa2.22□□□□□ -2.05
VAB2YEL005C GTO3Q04806 366 aa2.22□□□□□ -2.05
VAB2YEL005C YOS9Q99220 542 aa2.22□□□□□ -2.05
VAB2YEL005C HIS1P00498 297 aaKnown RBP2.21□□□□□ -2.06
VAB2YEL005C DAL5P15365 543 aa2.21□□□□□ -2.06
VAB2YEL005C HSM3P38348 480 aa2.21□□□□□ -2.06
VAB2YEL005C YHI9P38765 294 aa2.21□□□□□ -2.06
VAB2YEL005C IBA57P47158 497 aa2.21□□□□□ -2.06
VAB2YEL005C HSH155P49955 971 aaKnown RBP2.21□□□□□ -2.06
VAB2YEL005C MIG2P53035 382 aa2.21□□□□□ -2.06
VAB2YEL005C KAP114P53067 1004 aa2.21□□□□□ -2.06
VAB2YEL005C TRM44Q02648 567 aaKnown RBP2.21□□□□□ -2.06
VAB2YEL005C TVP15Q03860 143 aa2.21□□□□□ -2.06
VAB2YEL005C RFM1Q12192 310 aa2.21□□□□□ -2.06
VAB2YEL005C PAN1P32521 1480 aa2.2□□□□□ -2.06
VAB2YEL005C POF1P25576 258 aa2.2□□□□□ -2.06
VAB2YEL005C BMH1P29311 267 aaKnown RBP2.2□□□□□ -2.06
VAB2YEL005C YBL081WP38180 368 aaKnown RBP2.2□□□□□ -2.06
VAB2YEL005C SMC2P38989 1170 aaKnown RBP2.2□□□□□ -2.06
VAB2YEL005C SPO73P40031 143 aa2.2□□□□□ -2.06
VAB2YEL005C COA1P40452 197 aa2.2□□□□□ -2.06
VAB2YEL005C RPN14P53196 417 aa2.2□□□□□ -2.06
VAB2YEL005C SLX9P53251 210 aaPredicted RBP2.2□□□□□ -2.06
VAB2YEL005C PEX10Q05568 337 aa2.2□□□□□ -2.06
VAB2YEL005C STH1P32597 1359 aa2.2□□□□□ -2.06
VAB2YEL005C MET2P08465 486 aa2.19□□□□□ -2.06
VAB2YEL005C RPL4AP10664 362 aaKnown RBP2.19□□□□□ -2.06
VAB2YEL005C RRT12P25381 491 aa2.19□□□□□ -2.06
VAB2YEL005C ATG15P25641 520 aa2.19□□□□□ -2.06
VAB2YEL005C ALK2P32789 676 aaPredicted RBP2.19□□□□□ -2.06
VAB2YEL005C CAB3P36076 571 aa2.19□□□□□ -2.06
VAB2YEL005C HEK2P38199 381 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
VAB2YEL005C TRM7P38238 310 aaKnown RBP2.19□□□□□ -2.06
VAB2YEL005C SPL2P38839 148 aa2.19□□□□□ -2.06
VAB2YEL005C DDI1P40087 428 aa2.19□□□□□ -2.06
VAB2YEL005C YJL144WP47009 104 aa2.19□□□□□ -2.06
VAB2YEL005C RPL4BP49626 362 aaKnown RBP2.19□□□□□ -2.06
VAB2YEL005C YGL088WP53151 121 aa2.19□□□□□ -2.06
VAB2YEL005C LSB1P53281 241 aa2.19□□□□□ -2.06
VAB2YEL005C ATC1Q04005 294 aa2.19□□□□□ -2.06
VAB2YEL005C ADH6Q04894 360 aaKnown RBP2.19□□□□□ -2.06
VAB2YEL005C BTS1Q12051 335 aa2.19□□□□□ -2.06
VAB2YEL005C PRR2Q12310 699 aa2.19□□□□□ -2.06
VAB2YEL005C TIM22Q12328 207 aa2.19□□□□□ -2.06
VAB2YEL005C ISD11Q6Q560 94 aa2.19□□□□□ -2.06
VAB2YEL005C YKR032WP36127 104 aa2.18□□□□□ -2.06
VAB2YEL005C YJR012CP47087 207 aa2.18□□□□□ -2.06
VAB2YEL005C FMP41P53889 259 aaKnown RBP2.18□□□□□ -2.06
VAB2YEL005C DIA1P54005 336 aa2.18□□□□□ -2.06
VAB2YEL005C YDR209CQ03480 137 aa2.18□□□□□ -2.06
VAB2YEL005C OST6Q03723 332 aa2.18□□□□□ -2.06
VAB2YEL005C ATG12P38316 186 aa2.17□□□□□ -2.06
VAB2YEL005C SPT8P38915 602 aa2.17□□□□□ -2.06
VAB2YEL005C NPT1P39683 429 aaKnown RBP2.17□□□□□ -2.06
VAB2YEL005C SYF2P53277 215 aaPredicted RBP2.17□□□□□ -2.06
VAB2YEL005C ALG11P53954 548 aaKnown RBP2.17□□□□□ -2.06
VAB2YEL005C COX20Q04935 205 aa2.17□□□□□ -2.06
VAB2YEL005C ARV1Q06541 321 aa2.17□□□□□ -2.06
VAB2YEL005C ATG5Q12380 294 aa2.17□□□□□ -2.06
VAB2YEL005C DAL82P21705 255 aa2.16□□□□□ -2.06
VAB2YEL005C RSA4P25382 515 aaKnown RBP2.16□□□□□ -2.06
VAB2YEL005C MIG1P27705 504 aa2.16□□□□□ -2.06
VAB2YEL005C YUH1P35127 236 aa2.16□□□□□ -2.06
VAB2YEL005C CSG2P35206 410 aa2.16□□□□□ -2.06
VAB2YEL005C ARN2P38724 620 aa2.16□□□□□ -2.06
VAB2YEL005C SUR2P38992 349 aa2.16□□□□□ -2.06
VAB2YEL005C YJL118WP47022 219 aa2.16□□□□□ -2.06
VAB2YEL005C NIF3P53081 288 aa2.16□□□□□ -2.06
VAB2YEL005C MNT4P53745 580 aa2.16□□□□□ -2.06
VAB2YEL005C YNL095CP53932 642 aa2.16□□□□□ -2.06
VAB2YEL005C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
VAB2YEL005C SDC1Q03323 175 aa2.16□□□□□ -2.06
VAB2YEL005C YOL019WQ08157 551 aa2.16□□□□□ -2.06
VAB2YEL005C SLD7Q08457 257 aa2.16□□□□□ -2.06
VAB2YEL005C FEX1Q08913 375 aa2.16□□□□□ -2.06
VAB2YEL005C FEX2Q08991 375 aa2.16□□□□□ -2.06
VAB2YEL005C SME1Q12330 94 aaPredicted RBP2.16□□□□□ -2.06
VAB2YEL005C ZWF1P11412 505 aaKnown RBP2.15□□□□□ -2.07
VAB2YEL005C HMT1P38074 348 aa2.15□□□□□ -2.07
VAB2YEL005C SER33P40510 469 aa2.15□□□□□ -2.07
VAB2YEL005C RPL10P41805 221 aaKnown RBP2.15□□□□□ -2.07
VAB2YEL005C KAP95Q06142 861 aaKnown RBP2.15□□□□□ -2.07
VAB2YEL005C YOL107WQ12239 342 aa2.15□□□□□ -2.07
VAB2YEL005C PST1Q12355 444 aa2.15□□□□□ -2.07
VAB2YEL005C RRP36Q12481 300 aaPredicted RBP2.15□□□□□ -2.07
VAB2YEL005C AI5_BETAQ9ZZX0 354 aa2.15□□□□□ -2.07
VAB2YEL005C RSR1P13856 272 aa2.14□□□□□ -2.07
VAB2YEL005C KRE1P17260 313 aa2.14□□□□□ -2.07
VAB2YEL005C SFC1P33303 322 aa2.14□□□□□ -2.07
VAB2YEL005C MAL13P53338 473 aa2.14□□□□□ -2.07
VAB2YEL005C YPL039WQ03080 316 aa2.14□□□□□ -2.07
VAB2YEL005C HRT1Q08273 121 aa2.14□□□□□ -2.07
VAB2YEL005C YPL119C-AQ3E751 87 aa2.14□□□□□ -2.07
VAB2YEL005C INO80P53115 1489 aa2.14□□□□□ -2.07
VAB2YEL005C COX2P00410 251 aa2.13□□□□□ -2.07
VAB2YEL005C RAD3P06839 778 aa2.13□□□□□ -2.07
VAB2YEL005C VPS3P23643 1011 aa2.13□□□□□ -2.07
VAB2YEL005C CWP1P28319 239 aa2.13□□□□□ -2.07
VAB2YEL005C UTR5P32630 166 aa2.13□□□□□ -2.07
VAB2YEL005C MAL32P38158 584 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms