RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	RRP9	Q06506	573 aa	Known RBP	10.89	□□□□□ -0.67
NPL3	YDR432W	SYC1	Q08553	188 aa	Predicted RBP	10.89	□□□□□ -0.67
NPL3	YDR432W	SCEI	P03882	235 aa		10.88	□□□□□ -0.67
NPL3	YDR432W	OPI3	P05375	206 aa		10.88	□□□□□ -0.67
NPL3	YDR432W	RPL6B	P05739	176 aa	Known RBP	10.88	□□□□□ -0.67
NPL3	YDR432W	CLG1	P35190	452 aa		10.88	□□□□□ -0.67
NPL3	YDR432W	CIK1	Q01649	594 aa		10.88	□□□□□ -0.67
NPL3	YDR432W	YPL077C	Q02831	240 aa		10.88	□□□□□ -0.67
NPL3	YDR432W	YGR161W-C	Q3E744	92 aa		10.88	□□□□□ -0.67
NPL3	YDR432W	MSI1	P13712	422 aa		10.87	□□□□□ -0.67
NPL3	YDR432W	HNM1	P19807	563 aa		10.87	□□□□□ -0.67
NPL3	YDR432W	FPS1	P23900	669 aa		10.87	□□□□□ -0.67
NPL3	YDR432W	KRR1	P25586	316 aa	Predicted RBP	10.87	□□□□□ -0.67
NPL3	YDR432W	VMA6	P32366	345 aa	Known RBP	10.87	□□□□□ -0.67
NPL3	YDR432W	SHE1	P38200	338 aa		10.87	□□□□□ -0.67
NPL3	YDR432W	PHO90	P39535	881 aa		10.87	□□□□□ -0.67
NPL3	YDR432W	SFH5	P47008	294 aa		10.87	□□□□□ -0.67
NPL3	YDR432W	PRP3	Q03338	469 aa	Predicted RBP	10.87	□□□□□ -0.67
NPL3	YDR432W	YER145C-A	A0A023PYF4	145 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	MET3	P08536	511 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	10.86	□□□□□ -0.67	not detected
NPL3	YDR432W	SUR1	P33300	382 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	SRP102	P36057	244 aa	Predicted RBP	10.86	□□□□□ -0.67
NPL3	YDR432W	BAP2	P38084	609 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	GLR1	P41921	483 aa	Known RBP	10.86	□□□□□ -0.67
NPL3	YDR432W	EFM3	P47163	339 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	YMR315W	Q04869	349 aa	Known RBP	10.86	□□□□□ -0.67
NPL3	YDR432W	NNT1	Q05874	261 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	SNA4	Q07549	140 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	RBD2	Q12270	262 aa		10.86	□□□□□ -0.67
NPL3	YDR432W	YML003W	P0CF16	290 aa		10.85	□□□□□ -0.67
NPL3	YDR432W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	10.85	□□□□□ -0.67	not detected
NPL3	YDR432W	GLC7	P32598	312 aa	Known RBP	10.85	□□□□□ -0.67
NPL3	YDR432W	HIS6	P40545	261 aa		10.85	□□□□□ -0.67
NPL3	YDR432W	VOA1	P53262	265 aa		10.85	□□□□□ -0.67
NPL3	YDR432W	MAK3	Q03503	176 aa		10.85	□□□□□ -0.67
NPL3	YDR432W	YLR173W	Q06247	608 aa		10.85	□□□□□ -0.67
NPL3	YDR432W	YPR196W	Q06595	470 aa		10.85	□□□□□ -0.67
NPL3	YDR432W	RRS1	Q08746	203 aa	Known RBP	10.85	□□□□□ -0.67
NPL3	YDR432W	DSF1	P0CX08	502 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	YNR073C	P0CX09	502 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	YER188W	P40103	239 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	FMC1	P40491	155 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	LOH1	P47055	219 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	DIG2	Q03373	323 aa	Known RBP	10.84	□□□□□ -0.67
NPL3	YDR432W	AIM36	Q03798	255 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	NEJ1	Q06148	342 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	FRE5	Q08908	694 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	ERP4	Q12450	207 aa		10.84	□□□□□ -0.67
NPL3	YDR432W	MRPS28	P21771	286 aa		10.83	□□□□□ -0.68
NPL3	YDR432W	NTA1	P40354	457 aa		10.83	□□□□□ -0.68
NPL3	YDR432W	PPT1	P53043	513 aa		10.83	□□□□□ -0.68
NPL3	YDR432W	RMD9	P53140	646 aa	Known RBP	10.83	□□□□□ -0.68
NPL3	YDR432W	RSM23	Q01163	450 aa		10.83	□□□□□ -0.68
NPL3	YDR432W	YLR346C	Q06139	101 aa		10.83	□□□□□ -0.68
NPL3	YDR432W	BOS1	P25385	244 aa		10.82	□□□□□ -0.68
NPL3	YDR432W	ARO7	P32178	256 aa		10.82	□□□□□ -0.68
NPL3	YDR432W	SDP1	P40479	209 aa		10.82	□□□□□ -0.68
NPL3	YDR432W	YIP4	P53093	235 aa		10.82	□□□□□ -0.68
NPL3	YDR432W	SAY1	P53324	424 aa		10.82	□□□□□ -0.68
NPL3	YDR432W	YOR378W	Q08902	515 aa		10.82	□□□□□ -0.68
NPL3	YDR432W	THP3	Q12049	470 aa	Known RBP	10.82	□□□□□ -0.68
NPL3	YDR432W	FRE8	Q12209	686 aa		10.82	□□□□□ -0.68
NPL3	YDR432W	RPS13	P05756	151 aa	Known RBP	10.81	□□□□□ -0.68
NPL3	YDR432W	STE18	P18852	110 aa		10.81	□□□□□ -0.68
NPL3	YDR432W	FUN19	P28003	413 aa	Predicted RBP	10.81	□□□□□ -0.68
NPL3	YDR432W	FAT1	P38225	669 aa		10.81	□□□□□ -0.68
NPL3	YDR432W	FLX1	P40464	311 aa		10.81	□□□□□ -0.68
NPL3	YDR432W	ASI3	P53983	676 aa		10.81	□□□□□ -0.68
NPL3	YDR432W	RBS1	Q05672	457 aa	Known RBP	10.81	□□□□□ -0.68
NPL3	YDR432W	AIM6	Q07716	390 aa		10.81	□□□□□ -0.68
NPL3	YDR432W	APA2	P22108	325 aa		10.8	□□□□□ -0.68
NPL3	YDR432W	YKR015C	P36111	568 aa		10.8	□□□□□ -0.68
NPL3	YDR432W	PAM16	P42949	149 aa		10.8	□□□□□ -0.68
NPL3	YDR432W	PRM15	Q03262	622 aa		10.8	□□□□□ -0.68
NPL3	YDR432W	CSI2	Q08054	341 aa		10.8	□□□□□ -0.68
NPL3	YDR432W	TY1A-BL	Q12266	440 aa		10.8	□□□□□ -0.68
NPL3	YDR432W	PDE2	P06776	526 aa		10.79	□□□□□ -0.68
NPL3	YDR432W	MEK1	P24719	497 aa	Predicted RBP	10.79	□□□□□ -0.68
NPL3	YDR432W	RPC34	P32910	317 aa		10.79	□□□□□ -0.68
NPL3	YDR432W	ECT1	P33412	323 aa		10.79	□□□□□ -0.68
NPL3	YDR432W	SDS22	P36047	338 aa		10.79	□□□□□ -0.68
NPL3	YDR432W	ARO9	P38840	513 aa	Predicted RBP	10.79	□□□□□ -0.68
NPL3	YDR432W	NVJ1	P38881	321 aa		10.79	□□□□□ -0.68
NPL3	YDR432W	RBL2	P48606	106 aa	Known RBP	10.79	□□□□□ -0.68
NPL3	YDR432W	YOL114C	Q12322	202 aa		10.79	□□□□□ -0.68
NPL3	YDR432W	COX5B	P00425	151 aa		10.78	□□□□□ -0.68
NPL3	YDR432W	PCL1	P24867	279 aa		10.78	□□□□□ -0.68
NPL3	YDR432W	THI2	P38141	450 aa		10.78	□□□□□ -0.68
NPL3	YDR432W	YHC3	P47040	408 aa		10.78	□□□□□ -0.68
NPL3	YDR432W	SCW11	P53189	542 aa		10.78	□□□□□ -0.68
NPL3	YDR432W	YGL041W-A	P0C5N3	154 aa		10.77	□□□□□ -0.69
NPL3	YDR432W	NAM2	P11325	894 aa		10.77	□□□□□ -0.69
NPL3	YDR432W	RPA135	P22138	1203 aa	Known RBP	10.77	□□□□□ -0.69
NPL3	YDR432W	PUT3	P25502	979 aa	Predicted RBP	10.77	□□□□□ -0.69
NPL3	YDR432W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	10.77	□□□□□ -0.69	not detected
NPL3	YDR432W	SMM1	P53720	384 aa	Known RBP	10.77	□□□□□ -0.69
NPL3	YDR432W	YDC1	Q02896	317 aa		10.77	□□□□□ -0.69
NPL3	YDR432W	MRX8	Q05473	314 aa		10.77	□□□□□ -0.69
NPL3	YDR432W	BRE4	Q07660	1125 aa		10.77	□□□□□ -0.69

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms