RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C RPL16BP26785 198 aaKnown RBP1.46□□□□□ -2.18
ASM4YDL088C KRE6P32486 720 aa1.46□□□□□ -2.18
ASM4YDL088C SRB4P32569 687 aa1.46□□□□□ -2.18
ASM4YDL088C IMP3P32899 183 aaPredicted RBP1.46□□□□□ -2.18
ASM4YDL088C MSN4P33749 630 aa1.46□□□□□ -2.18
ASM4YDL088C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
ASM4YDL088C MCH2P36032 473 aa1.46□□□□□ -2.18
ASM4YDL088C RPC37P36121 282 aa1.46□□□□□ -2.18
ASM4YDL088C AIM29P36154 155 aa1.46□□□□□ -2.18
ASM4YDL088C YHR045WP38775 560 aa1.46□□□□□ -2.18
ASM4YDL088C SHC1P39000 512 aa1.46□□□□□ -2.18
ASM4YDL088C SHQ1P40486 507 aaPredicted RBP1.46□□□□□ -2.18
ASM4YDL088C YIA6P40556 373 aa1.46□□□□□ -2.18
ASM4YDL088C TAD2P47058 250 aa1.46□□□□□ -2.18
ASM4YDL088C YNL040WP53960 456 aaPredicted RBP1.46□□□□□ -2.18
ASM4YDL088C PBP4Q07362 185 aaKnown RBP1.46□□□□□ -2.18
ASM4YDL088C PAM18Q07914 168 aa1.46□□□□□ -2.18
ASM4YDL088C RDL2Q08742 149 aaKnown RBP1.46□□□□□ -2.18
ASM4YDL088C CSM4Q08955 156 aa1.46□□□□□ -2.18
ASM4YDL088C UTP23Q12339 254 aaKnown RBP1.46□□□□□ -2.18
ASM4YDL088C TRM10Q12400 293 aa1.46□□□□□ -2.18
ASM4YDL088C QCR6P00127 147 aa1.45□□□□□ -2.18
ASM4YDL088C RPL31AP0C2H8 113 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C MRP1P10662 321 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C CWP1P28319 239 aa1.45□□□□□ -2.18
ASM4YDL088C YKL063CP35725 167 aa1.45□□□□□ -2.18
ASM4YDL088C MRX3P38172 270 aa1.45□□□□□ -2.18
ASM4YDL088C COA1P40452 197 aa1.45□□□□□ -2.18
ASM4YDL088C YRB1P41920 201 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C NBP1P52919 319 aaPredicted RBP1.45□□□□□ -2.18
ASM4YDL088C ALG11P53954 548 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C TRM44Q02648 567 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C YMR209CQ03648 457 aa1.45□□□□□ -2.18
ASM4YDL088C SNX41Q04053 625 aa1.45□□□□□ -2.18
ASM4YDL088C VBA1Q04301 562 aa1.45□□□□□ -2.18
ASM4YDL088C ATG38Q05789 226 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C ASR1Q06834 288 aa1.45□□□□□ -2.18
ASM4YDL088C MRX9Q07349 420 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C SDO1Q07953 250 aaKnown RBP1.45□□□□□ -2.18
ASM4YDL088C RRP42Q12277 265 aaPredicted RBP1.45□□□□□ -2.18
ASM4YDL088C ERP3Q12403 225 aa1.45□□□□□ -2.18
ASM4YDL088C NCB2Q92317 146 aa1.45□□□□□ -2.18
ASM4YDL088C HIS1P00498 297 aaKnown RBP1.44□□□□□ -2.18
ASM4YDL088C REP1P03871 373 aa1.44□□□□□ -2.18
ASM4YDL088C CDC42P19073 191 aa1.44□□□□□ -2.18
ASM4YDL088C DOA4P32571 926 aa1.44□□□□□ -2.18
ASM4YDL088C SIP3P38717 1229 aa1.44□□□□□ -2.18
ASM4YDL088C SOP4P39543 234 aaPredicted RBP1.44□□□□□ -2.18
ASM4YDL088C EDC2P40023 145 aaPredicted RBP1.44□□□□□ -2.18
ASM4YDL088C GDS1P41913 522 aa1.44□□□□□ -2.18
ASM4YDL088C UBC13P52490 153 aa1.44□□□□□ -2.18
ASM4YDL088C SYF2P53277 215 aaPredicted RBP1.44□□□□□ -2.18
ASM4YDL088C GIM3P53900 129 aa1.44□□□□□ -2.18
ASM4YDL088C MRPS17Q03246 237 aaPredicted RBP1.44□□□□□ -2.18
ASM4YDL088C MSH5Q12175 901 aa1.44□□□□□ -2.18
ASM4YDL088C YPL245WQ12179 454 aaKnown RBP1.44□□□□□ -2.18
ASM4YDL088C YPR064WQ12492 139 aa1.44□□□□□ -2.18
ASM4YDL088C BEM2P39960 2167 aaKnown RBP1.44□□□□□ -2.18
ASM4YDL088C CFT1Q06632 1357 aaKnown RBP1.43□□□□□ -2.18
ASM4YDL088C TFS1P14306 219 aa1.43□□□□□ -2.18
ASM4YDL088C RPL24BP24000 155 aaKnown RBP1.43□□□□□ -2.18
ASM4YDL088C RNA15P25299 296 aaPredicted RBP1.43□□□□□ -2.18
ASM4YDL088C RPS5P26783 225 aaKnown RBP1.43□□□□□ -2.18
ASM4YDL088C PEX3P28795 441 aa1.43□□□□□ -2.18
ASM4YDL088C VPH2P32341 215 aa1.43□□□□□ -2.18
ASM4YDL088C PRS2P38620 318 aaKnown RBP1.43□□□□□ -2.18
ASM4YDL088C YJL118WP47022 219 aa1.43□□□□□ -2.18
ASM4YDL088C YPT32P51996 222 aaKnown RBP1.43□□□□□ -2.18
ASM4YDL088C CPD1P53314 239 aa1.43□□□□□ -2.18
ASM4YDL088C SSQ1Q05931 657 aaPredicted RBP1.43□□□□□ -2.18
ASM4YDL088C SPO77Q06134 477 aa1.43□□□□□ -2.18
ASM4YDL088C MIM1Q08176 113 aa1.43□□□□□ -2.18
ASM4YDL088C POM33Q12164 279 aa1.43□□□□□ -2.18
ASM4YDL088C SME1Q12330 94 aaPredicted RBP1.43□□□□□ -2.18
ASM4YDL088C LAG2Q92325 660 aa1.43□□□□□ -2.18
ASM4YDL088C STH1P32597 1359 aa1.43□□□□□ -2.18
ASM4YDL088C RPO26P20435 155 aa1.42□□□□□ -2.18
ASM4YDL088C MRPL25P23369 157 aa1.42□□□□□ -2.18
ASM4YDL088C PPA2P28239 310 aa1.42□□□□□ -2.18
ASM4YDL088C VMA6P32366 345 aaKnown RBP1.42□□□□□ -2.18
ASM4YDL088C MRPL6P32904 214 aa1.42□□□□□ -2.18
ASM4YDL088C THO1P40040 218 aaKnown RBP1.42□□□□□ -2.18
ASM4YDL088C COX15P40086 486 aa1.42□□□□□ -2.18
ASM4YDL088C DSN1P40568 576 aa1.42□□□□□ -2.18
ASM4YDL088C RPC17P47076 161 aa1.42□□□□□ -2.18
ASM4YDL088C IBA57P47158 497 aa1.42□□□□□ -2.18
ASM4YDL088C NOP13P53883 403 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
ASM4YDL088C YNL095CP53932 642 aa1.42□□□□□ -2.18
ASM4YDL088C OST6Q03723 332 aa1.42□□□□□ -2.18
ASM4YDL088C BNA7Q04066 261 aa1.42□□□□□ -2.18
ASM4YDL088C YLR446WQ06204 433 aa1.42□□□□□ -2.18
ASM4YDL088C YAL064W-BO13512 126 aa1.42□□□□□ -2.18
ASM4YDL088C NHP6BP11633 99 aaKnown RBP1.42□□□□□ -2.18
ASM4YDL088C SPS100P13130 326 aa1.42□□□□□ -2.18
ASM4YDL088C YAK1P14680 807 aa1.42□□□□□ -2.18
ASM4YDL088C ERD1P16151 362 aa1.42□□□□□ -2.18
ASM4YDL088C COQ1P18900 473 aa1.42□□□□□ -2.18
ASM4YDL088C PBN1P25580 416 aa1.42□□□□□ -2.18
ASM4YDL088C YPC1P38298 316 aa1.42□□□□□ -2.18
ASM4YDL088C BIG1P38813 335 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms