RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP43	YCR035C	HSV2	P50079	448 aa	Predicted RBP	6.59	□□□□□ -1.35
RRP43	YCR035C	RAI1	P53063	387 aa	Known RBP	6.59	□□□□□ -1.35
RRP43	YCR035C	RCF1	Q03713	159 aa		6.59	□□□□□ -1.35
RRP43	YCR035C	MRX8	Q05473	314 aa		6.59	□□□□□ -1.35
RRP43	YCR035C	GAS2	Q06135	555 aa		6.59	□□□□□ -1.35
RRP43	YCR035C	SSK1	Q07084	712 aa		6.59	□□□□□ -1.35
RRP43	YCR035C	NGL1	Q08213	363 aa	Known RBP	6.59	□□□□□ -1.35
RRP43	YCR035C	SYC1	Q08553	188 aa	Predicted RBP	6.59	□□□□□ -1.35
RRP43	YCR035C	TIR4	Q12218	487 aa	Predicted RBP	6.59	□□□□□ -1.35
RRP43	YCR035C	COX9	P07255	59 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	SPO7	P18410	259 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	ZUO1	P32527	433 aa	Known RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	DOA4	P32571	926 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	MTH1	P35198	433 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	6.58	□□□□□ -1.36	not detected
RRP43	YCR035C	AIM3	P38266	947 aa	Known RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	PTI1	P39927	425 aa	Predicted RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	TIR3	P40552	269 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	DPB11	P47027	764 aa	Predicted RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	PMT5	P52867	743 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	CWC23	P52868	283 aa	Predicted RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	RMD9	P53140	646 aa	Known RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	PET191	Q02772	108 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	MRP51	Q02950	344 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	SSY1	Q03770	852 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	AIM36	Q03798	255 aa		6.58	□□□□□ -1.36
RRP43	YCR035C	NMA1	Q06178	401 aa	Known RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	TSR2	Q06672	205 aa	Known RBP	6.58	□□□□□ -1.36
RRP43	YCR035C	SOD2	P00447	233 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	GCN4	P03069	281 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	RPS18A	P0CX55	146 aa	Known RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	RPS18B	P0CX56	146 aa	Predicted RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	MRP1	P10662	321 aa	Known RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	MEK1	P24719	497 aa	Predicted RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	ERG4	P25340	473 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	PAU2	P32612	120 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	SPT10	P35208	640 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	YHK8	P38776	514 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	PTH1	P38876	190 aa	Known RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	MIT1	P40002	666 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	SLZ1	P40167	298 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	YJR120W	P47157	116 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	RPN14	P53196	417 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	SRP1	Q02821	542 aa	Known RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	TDA1	Q03533	586 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	MSS11	Q03825	758 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	RVB1	Q03940	463 aa	Known RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	COQ11	Q05892	277 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	HRI1	Q05905	244 aa	Known RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	LUC7	Q07508	261 aa	Predicted RBP	6.57	□□□□□ -1.36
RRP43	YCR035C	YDL218W	Q07629	317 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	MCH4	Q08268	501 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	YPL272C	Q08984	517 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	SUS1	Q6WNK7	96 aa		6.57	□□□□□ -1.36
RRP43	YCR035C	IPP1	P00817	287 aa	Known RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	RPS16A	P0CX51	143 aa	Known RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	RPS16B	P0CX52	143 aa	Known RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	NPL6	P32832	435 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	ZRT3	P34240	503 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	CCZ1	P38273	704 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	RTT105	P40063	208 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	SLS1	P42900	643 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	SER2	P42941	309 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	ATG18	P43601	500 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	LYS20	P48570	428 aa	Known RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	IMD3	P50095	523 aa	Known RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	DOC1	P53068	250 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	YGL204C	P53089	101 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	ELA1	P53861	379 aa	Predicted RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	PLB2	Q03674	706 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	ASR1	Q06834	288 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	RTC5	Q12108	567 aa	Known RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	LYS21	Q12122	440 aa	Known RBP	6.56	□□□□□ -1.36
RRP43	YCR035C	YDL180W	Q12301	547 aa		6.56	□□□□□ -1.36
RRP43	YCR035C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
RRP43	YCR035C	SEC16	P48415	2195 aa	Known RBP	6.55	□□□□□ -1.36
RRP43	YCR035C	HIS3	P06633	220 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	ADK1	P07170	222 aa	Known RBP	6.55	□□□□□ -1.36
RRP43	YCR035C	PRB1	P09232	635 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	DBF2	P22204	572 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	PCL1	P24867	279 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	HOM6	P31116	359 aa	Known RBP	6.55	□□□□□ -1.36
RRP43	YCR035C	TMA19	P35691	167 aa	Known RBP	6.55	□□□□□ -1.36
RRP43	YCR035C	SFK1	P35735	353 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	SDS24	P38314	527 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	FCY21	P40039	528 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	MRH4	P53166	561 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	SOK2	P53438	785 aa	Predicted RBP	6.55	□□□□□ -1.36
RRP43	YCR035C	DAL4	Q04895	635 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	RTN2	Q12443	393 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	RRI1	Q12468	440 aa		6.55	□□□□□ -1.36
RRP43	YCR035C	GCN1	P33892	2672 aa	Known RBP	6.54	□□□□□ -1.36
RRP43	YCR035C	QCR7	P00128	127 aa		6.54	□□□□□ -1.36
RRP43	YCR035C	SCEI	P03882	235 aa		6.54	□□□□□ -1.36
RRP43	YCR035C	PHO2	P07269	559 aa		6.54	□□□□□ -1.36
RRP43	YCR035C	SED4	P25365	1065 aa		6.54	□□□□□ -1.36
RRP43	YCR035C	ITR1	P30605	584 aa		6.54	□□□□□ -1.36
RRP43	YCR035C	MRPL39	P36533	70 aa		6.54	□□□□□ -1.36
RRP43	YCR035C	MTC6	P38849	526 aa		6.54	□□□□□ -1.36
RRP43	YCR035C	MTM1	P53320	366 aa		6.54	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 151.3 ms