RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W YNL247WP53852 767 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W PEX30Q06169 523 aa3.33□□□□□ -1.88
VPS27YNR006W YLR446WQ06204 433 aa3.33□□□□□ -1.88
VPS27YNR006W ATG17Q06410 417 aa3.33□□□□□ -1.88
VPS27YNR006W MRX9Q07349 420 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W DSE3Q08729 430 aa3.33□□□□□ -1.88
VPS27YNR006W RSA1Q08932 381 aa3.33□□□□□ -1.88
VPS27YNR006W AYT1Q12226 474 aa3.33□□□□□ -1.88
VPS27YNR006W RRP42Q12277 265 aaPredicted RBP3.33□□□□□ -1.88
VPS27YNR006W THO2P53552 1597 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W PIS1P06197 220 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W PET494P07390 489 aaPredicted RBP3.33□□□□□ -1.88
VPS27YNR006W ERD1P16151 362 aa3.33□□□□□ -1.88
VPS27YNR006W SNF6P18888 332 aa3.33□□□□□ -1.88
VPS27YNR006W DEP1P31385 405 aa3.33□□□□□ -1.88
VPS27YNR006W YKL075CP36083 450 aa3.33□□□□□ -1.88
VPS27YNR006W YBR062CP38239 180 aa3.33□□□□□ -1.88
VPS27YNR006W RCK1P38622 512 aa3.33□□□□□ -1.88
VPS27YNR006W SER33P40510 469 aa3.33□□□□□ -1.88
VPS27YNR006W ALG13P53178 202 aa3.33□□□□□ -1.88
VPS27YNR006W GOR1P53839 350 aa3.33□□□□□ -1.88
VPS27YNR006W ASI3P53983 676 aa3.33□□□□□ -1.88
VPS27YNR006W PRP38Q00723 242 aaPredicted RBP3.33□□□□□ -1.88
VPS27YNR006W ARC18Q05933 178 aaKnown RBP3.33□□□□□ -1.88
VPS27YNR006W VIK1Q12045 647 aa3.33□□□□□ -1.88
VPS27YNR006W FCY22Q12119 530 aa3.33□□□□□ -1.88
VPS27YNR006W PER33Q12144 273 aa3.33□□□□□ -1.88
VPS27YNR006W DCN1Q12395 269 aa3.33□□□□□ -1.88
VPS27YNR006W EAF3Q12432 401 aa3.33□□□□□ -1.88
VPS27YNR006W TUS1Q06412 1307 aa3.32□□□□□ -1.88
VPS27YNR006W RPL20AP0CX23 172 aaKnown RBP3.32□□□□□ -1.88
VPS27YNR006W RPL20BP0CX24 172 aaPredicted RBP3.32□□□□□ -1.88
VPS27YNR006W ATR1P13090 542 aa3.32□□□□□ -1.88
VPS27YNR006W FBA1P14540 359 aaKnown RBP3.32□□□□□ -1.88
VPS27YNR006W YAK1P14680 807 aa3.32□□□□□ -1.88
VPS27YNR006W CMK2P22517 447 aa3.32□□□□□ -1.88
VPS27YNR006W CDC10P25342 322 aaKnown RBP3.32□□□□□ -1.88
VPS27YNR006W JEN1P36035 616 aa3.32□□□□□ -1.88
VPS27YNR006W VPS51P36116 164 aa3.32□□□□□ -1.88
VPS27YNR006W NAT2P37293 288 aa3.32□□□□□ -1.88
VPS27YNR006W RPR2P40571 144 aa3.32□□□□□ -1.88
VPS27YNR006W DIM1P41819 318 aaKnown RBP3.32□□□□□ -1.88
VPS27YNR006W NBP35P52920 328 aa3.32□□□□□ -1.88
VPS27YNR006W YGL159WP53110 370 aa3.32□□□□□ -1.88
VPS27YNR006W TPC1P53257 314 aa3.32□□□□□ -1.88
VPS27YNR006W YIP3P53633 176 aa3.32□□□□□ -1.88
VPS27YNR006W DIG1Q03063 452 aaKnown RBP3.32□□□□□ -1.88
VPS27YNR006W PRM6Q04705 352 aa3.32□□□□□ -1.88
VPS27YNR006W DPP1Q05521 289 aa3.32□□□□□ -1.88
VPS27YNR006W YHC1Q05900 231 aaKnown RBP3.32□□□□□ -1.88
VPS27YNR006W YPR091CQ06833 770 aa3.32□□□□□ -1.88
VPS27YNR006W YDL114WQ07530 308 aa3.32□□□□□ -1.88
VPS27YNR006W FOL3Q12676 427 aaPredicted RBP3.32□□□□□ -1.88
VPS27YNR006W STH1P32597 1359 aa3.32□□□□□ -1.88
VPS27YNR006W KOG1P38873 1557 aa3.31□□□□□ -1.88
VPS27YNR006W SSK2P53599 1579 aa3.31□□□□□ -1.88
VPS27YNR006W ESP1Q03018 1630 aa3.31□□□□□ -1.88
VPS27YNR006W CTA1P15202 515 aa3.31□□□□□ -1.88
VPS27YNR006W INO2P26798 304 aa3.31□□□□□ -1.88
VPS27YNR006W CUE1P38428 203 aa3.31□□□□□ -1.88
VPS27YNR006W NDT80P38830 627 aa3.31□□□□□ -1.88
VPS27YNR006W CHL4P38907 458 aa3.31□□□□□ -1.88
VPS27YNR006W RPH1P39956 796 aa3.31□□□□□ -1.88
VPS27YNR006W YIL029CP40538 142 aa3.31□□□□□ -1.88
VPS27YNR006W AIM23P47015 356 aa3.31□□□□□ -1.88
VPS27YNR006W IBD2P53892 351 aa3.31□□□□□ -1.88
VPS27YNR006W SCS7Q03529 384 aa3.31□□□□□ -1.88
VPS27YNR006W PEX10Q05568 337 aa3.31□□□□□ -1.88
VPS27YNR006W FAR10Q06001 478 aa3.31□□□□□ -1.88
VPS27YNR006W KTI12P34253 313 aaKnown RBP3.3□□□□□ -1.88
VPS27YNR006W MAK5P38112 773 aaPredicted RBP3.3□□□□□ -1.88
VPS27YNR006W YBP1P38315 674 aa3.3□□□□□ -1.88
VPS27YNR006W SUR2P38992 349 aa3.3□□□□□ -1.88
VPS27YNR006W SHC1P39000 512 aa3.3□□□□□ -1.88
VPS27YNR006W PEX22P39718 180 aa3.3□□□□□ -1.88
VPS27YNR006W VAB2P40003 282 aa3.3□□□□□ -1.88
VPS27YNR006W YER121WP40076 114 aa3.3□□□□□ -1.88
VPS27YNR006W PRE6P40303 254 aaKnown RBP3.3□□□□□ -1.88
VPS27YNR006W POG1P40473 351 aa3.3□□□□□ -1.88
VPS27YNR006W BMT5P40493 336 aa3.3□□□□□ -1.88
VPS27YNR006W GMC1Q04399 608 aa3.3□□□□□ -1.88
VPS27YNR006W MCT1Q12283 360 aa3.3□□□□□ -1.88
VPS27YNR006W JLP1Q12358 412 aa3.3□□□□□ -1.88
VPS27YNR006W SIN3P22579 1536 aa3.3□□□□□ -1.88
VPS27YNR006W RPL15AP05748 204 aaKnown RBP3.3□□□□□ -1.88
VPS27YNR006W MIR1P23641 311 aaKnown RBP3.3□□□□□ -1.88
VPS27YNR006W FRT2P39734 528 aa3.3□□□□□ -1.88
VPS27YNR006W VAC7P53950 1165 aa3.3□□□□□ -1.88
VPS27YNR006W ERP1Q05359 219 aaKnown RBP3.3□□□□□ -1.88
VPS27YNR006W SEC10Q06245 871 aa3.3□□□□□ -1.88
VPS27YNR006W MIM1Q08176 113 aa3.3□□□□□ -1.88
VPS27YNR006W YPL119C-AQ3E751 87 aa3.3□□□□□ -1.88
VPS27YNR006W SIR4P11978 1358 aa3.29□□□□□ -1.88
VPS27YNR006W TRP1P00912 224 aa3.29□□□□□ -1.88
VPS27YNR006W RPL28P02406 149 aaKnown RBP3.29□□□□□ -1.88
VPS27YNR006W RPS18AP0CX55 146 aaKnown RBP3.29□□□□□ -1.88
VPS27YNR006W RPS18BP0CX56 146 aaPredicted RBP3.29□□□□□ -1.88
VPS27YNR006W AEP1P32493 518 aa3.29□□□□□ -1.88
VPS27YNR006W KDX1P36005 433 aa3.29□□□□□ -1.88
VPS27YNR006W GOS1P38736 223 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms