RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C SBE22P38814 852 aa5.56□□□□□ -1.52
SCS7YMR272C ALP1P38971 573 aa5.56□□□□□ -1.52
SCS7YMR272C SPO73P40031 143 aa5.56□□□□□ -1.52
SCS7YMR272C YNL208WP40159 199 aaKnown RBP5.56□□□□□ -1.52
SCS7YMR272C YFL066CP43538 392 aa5.56□□□□□ -1.52
SCS7YMR272C CAK1P43568 368 aaPredicted RBP5.56□□□□□ -1.52
SCS7YMR272C IRC7P43623 340 aa5.56□□□□□ -1.52
SCS7YMR272C CWC23P52868 283 aaPredicted RBP5.56□□□□□ -1.52
SCS7YMR272C EXG2P52911 562 aa5.56□□□□□ -1.52
SCS7YMR272C BUD9P53226 547 aa5.56□□□□□ -1.52
SCS7YMR272C NQM1P53228 333 aaPredicted RBP5.56□□□□□ -1.52
SCS7YMR272C SYF2P53277 215 aaPredicted RBP5.56□□□□□ -1.52
SCS7YMR272C MNT4P53745 580 aa5.56□□□□□ -1.52
SCS7YMR272C CRZ1P53968 678 aa5.56□□□□□ -1.52
SCS7YMR272C SPR6Q01684 191 aa5.56□□□□□ -1.52
SCS7YMR272C BNA7Q04066 261 aa5.56□□□□□ -1.52
SCS7YMR272C MRPL51Q06090 140 aaPredicted RBP5.56□□□□□ -1.52
SCS7YMR272C SWA2Q06677 668 aa5.56□□□□□ -1.52
SCS7YMR272C IZH2Q12442 317 aa5.56□□□□□ -1.52
SCS7YMR272C RIB3Q99258 208 aa5.56□□□□□ -1.52
SCS7YMR272C NFT1P0CE68 1218 aa5.55□□□□□ -1.52
SCS7YMR272C RPS23AP0CX29 145 aaKnown RBP5.55□□□□□ -1.52
SCS7YMR272C RPS23BP0CX30 145 aa5.55□□□□□ -1.52
SCS7YMR272C PDA1P16387 420 aaKnown RBP5.55□□□□□ -1.52
SCS7YMR272C RPB8P20436 146 aa5.55□□□□□ -1.52
SCS7YMR272C PRP19P32523 503 aaKnown RBP5.55□□□□□ -1.52
SCS7YMR272C MRPL6P32904 214 aa5.55□□□□□ -1.52
SCS7YMR272C CLG1P35190 452 aa5.55□□□□□ -1.52
SCS7YMR272C SRO77P38163 1010 aa5.55□□□□□ -1.52
SCS7YMR272C YER121WP40076 114 aa5.55□□□□□ -1.52
SCS7YMR272C SFH5P47008 294 aa5.55□□□□□ -1.52
SCS7YMR272C UBC13P52490 153 aa5.55□□□□□ -1.52
SCS7YMR272C RAI1P53063 387 aaKnown RBP5.55□□□□□ -1.52
SCS7YMR272C SLD3P53135 668 aa5.55□□□□□ -1.52
SCS7YMR272C PRM8P53174 237 aa5.55□□□□□ -1.52
SCS7YMR272C RSM23Q01163 450 aa5.55□□□□□ -1.52
SCS7YMR272C GRX5Q02784 150 aa5.55□□□□□ -1.52
SCS7YMR272C MRP51Q02950 344 aa5.55□□□□□ -1.52
SCS7YMR272C RSM28Q03430 361 aa5.55□□□□□ -1.52
SCS7YMR272C RCF1Q03713 159 aa5.55□□□□□ -1.52
SCS7YMR272C IPK1Q06667 281 aa5.55□□□□□ -1.52
SCS7YMR272C MDM36Q06820 579 aa5.55□□□□□ -1.52
SCS7YMR272C BRE4Q07660 1125 aa5.55□□□□□ -1.52
SCS7YMR272C SYC1Q08553 188 aaPredicted RBP5.55□□□□□ -1.52
SCS7YMR272C SPC3Q12133 184 aa5.55□□□□□ -1.52
SCS7YMR272C NFI1Q12216 726 aa5.55□□□□□ -1.52
SCS7YMR272C CDC31P06704 161 aaKnown RBP5.54□□□□□ -1.52
SCS7YMR272C YCR100CP25606 316 aa5.54□□□□□ -1.52
SCS7YMR272C PRP21P32524 280 aaPredicted RBP5.54□□□□□ -1.52
SCS7YMR272C PAD1P33751 242 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SCS7YMR272C YKL077WP36081 392 aa5.54□□□□□ -1.52
SCS7YMR272C ARO9P38840 513 aaPredicted RBP5.54□□□□□ -1.52
SCS7YMR272C CHL4P38907 458 aa5.54□□□□□ -1.52
SCS7YMR272C YNL195CP40168 261 aa5.54□□□□□ -1.52
SCS7YMR272C JLP2P40206 208 aa5.54□□□□□ -1.52
SCS7YMR272C MSE1P48525 536 aa5.54□□□□□ -1.52
SCS7YMR272C IMD3P50095 523 aaKnown RBP5.54□□□□□ -1.52
SCS7YMR272C YNL165WP53891 406 aa5.54□□□□□ -1.52
SCS7YMR272C GMC1Q04399 608 aa5.54□□□□□ -1.52
SCS7YMR272C YMR315WQ04869 349 aaKnown RBP5.54□□□□□ -1.52
SCS7YMR272C HRT1Q08273 121 aa5.54□□□□□ -1.52
SCS7YMR272C BBP1Q12365 385 aa5.54□□□□□ -1.52
SCS7YMR272C HMS1Q12398 434 aa5.54□□□□□ -1.52
SCS7YMR272C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
SCS7YMR272C PCL9Q12477 304 aa5.54□□□□□ -1.52
SCS7YMR272C RPL6BP05739 176 aaKnown RBP5.53□□□□□ -1.52
SCS7YMR272C MET3P08536 511 aa5.53□□□□□ -1.52
SCS7YMR272C ENA1P13587 1091 aa5.53□□□□□ -1.52
SCS7YMR272C SED4P25365 1065 aa5.53□□□□□ -1.52
SCS7YMR272C YKL187CP34231 750 aa5.53□□□□□ -1.52
SCS7YMR272C APL3P38065 1025 aa5.53□□□□□ -1.52
SCS7YMR272C AIM3P38266 947 aaKnown RBP5.53□□□□□ -1.52
SCS7YMR272C YER084WP40057 128 aa5.53□□□□□ -1.52
SCS7YMR272C LSM4P40070 187 aaKnown RBP5.53□□□□□ -1.52
SCS7YMR272C GAT2P40209 560 aa5.53□□□□□ -1.52
SCS7YMR272C HIS6P40545 261 aa5.53□□□□□ -1.52
SCS7YMR272C DIE2P50076 525 aa5.53□□□□□ -1.52
SCS7YMR272C MOT3P54785 490 aaKnown RBP5.53□□□□□ -1.52
SCS7YMR272C ENA2Q01896 1091 aa5.53□□□□□ -1.52
SCS7YMR272C YDR102CQ03864 110 aa5.53□□□□□ -1.52
SCS7YMR272C FIN1Q03898 291 aa5.53□□□□□ -1.52
SCS7YMR272C ARP10Q04549 284 aa5.53□□□□□ -1.52
SCS7YMR272C GAL83Q04739 417 aa5.53□□□□□ -1.52
SCS7YMR272C PEX10Q05568 337 aa5.53□□□□□ -1.52
SCS7YMR272C NGL1Q08213 363 aaKnown RBP5.53□□□□□ -1.52
SCS7YMR272C TGS1Q12052 315 aa5.53□□□□□ -1.52
SCS7YMR272C SCM3Q12334 223 aa5.53□□□□□ -1.52
SCS7YMR272C RTN2Q12443 393 aa5.53□□□□□ -1.52
SCS7YMR272C AIR2Q12476 344 aaKnown RBP5.53□□□□□ -1.52
SCS7YMR272C DCP1Q12517 231 aaPredicted RBP5.53□□□□□ -1.52
SCS7YMR272C ENA5Q12691 1091 aa5.53□□□□□ -1.52
SCS7YMR272C HTZ1Q12692 134 aaKnown RBP5.53□□□□□ -1.52
SCS7YMR272C RPL15AP05748 204 aaKnown RBP5.52□□□□□ -1.53
SCS7YMR272C SPS4P09937 338 aa5.52□□□□□ -1.53
SCS7YMR272C YML003WP0CF16 290 aa5.52□□□□□ -1.53
SCS7YMR272C RPL24BP24000 155 aaKnown RBP5.52□□□□□ -1.53
SCS7YMR272C GSH1P32477 678 aa5.52□□□□□ -1.53
SCS7YMR272C SUR1P33300 382 aa5.52□□□□□ -1.53
SCS7YMR272C MTC6P38849 526 aa5.52□□□□□ -1.53
SCS7YMR272C SOP4P39543 234 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms