RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeast

Gene SHH3, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHH3	YMR118C	COX9	P07255	59 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	PHO2	P07269	559 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YFR010W-A	P0C5N0	62 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	NAM2	P11325	894 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	DPM1	P14020	267 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	SEC22	P22214	214 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	BOS1	P25385	244 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	ADK2	P26364	225 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YMC1	P32331	307 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	SFK1	P35735	353 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	TCD2	P36101	447 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	GMH1	P36125	273 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	FLO10	P36170	1169 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	ERV15	P38312	142 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YHR097C	P38809	366 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	YPT35	P38815	214 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SHH3	YMR118C	YEL068C	P39977	110 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YIL161W	P40449	235 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	ICE2	P40499	491 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YIL077C	P40508	320 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	MAD2	P40958	196 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	AZF1	P41696	914 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YJL016W	P47072	561 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YJR111C	P47148	283 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	YJR120W	P47157	116 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	SRB7	P47822	140 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YGL101W	P53144	215 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	COG7	P53195	279 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	PEF1	P53238	335 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YCL001W-A	P87012	153 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	ARG5,6	Q01217	863 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SHH3	YMR118C	ARL3	Q02804	198 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YMR178W	Q03219	274 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	RSF1	Q05043	376 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	RBS1	Q05672	457 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	NNT1	Q05874	261 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	BSP1	Q06604	576 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YPR091C	Q06833	770 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	CYK3	Q07533	885 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	GRC3	Q07845	632 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	REX4	Q08237	289 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	RRP40	Q08285	240 aa	Known RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	SCP1	Q08873	200 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YOR385W	Q08909	290 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	GUP2	Q08929	609 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YPR064W	Q12492	139 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	SKS1	Q12505	502 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	YJR112W-A	Q3E743	109 aa		3.19	□□□□□ -1.9
SHH3	YMR118C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.19	□□□□□ -1.9
SHH3	YMR118C	TDH2	P00358	332 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	UBI4	P0CG63	381 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	RPL40A	P0CH08	128 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	RPL40B	P0CH09	128 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	MTF1	P14908	341 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	FUR1	P18562	216 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	MCK1	P21965	375 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	PDE1	P22434	369 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	YCL002C	P25565	263 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	YCR100C	P25606	316 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SHH3	YMR118C	CNE1	P27825	502 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	ERG24	P32462	438 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	RPD3	P32561	433 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	MGM101	P32787	269 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	PXA2	P34230	853 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	GCS1	P35197	352 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	KKQ8	P36004	724 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	COS9	P36034	407 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	DOA1	P36037	715 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	BNA4	P38169	460 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	IML3	P38265	245 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	PRS2	P38620	318 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	LNP1	P38878	278 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	AXL2	P38928	823 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	FAA3	P39002	694 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	GIM4	P40005	111 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	PUG1	P40100	303 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	MMF1	P40185	145 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	YIL166C	P40445	542 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	YIR035C	P40579	254 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	IDP2	P41939	412 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	QRI1	P43123	477 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	BUL1	P48524	976 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	RAD17	P48581	401 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	HNT2	P49775	206 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	UBC9	P50623	157 aa	Predicted RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	COS12	P53053	380 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	EMC4	P53073	190 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	YGR042W	P53227	271 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	RSM27	P53305	110 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	FMP41	P53889	259 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	RHO4	Q00246	291 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	ACS1	Q01574	713 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	ROT1	Q03691	256 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	YMR310C	Q04867	317 aa	Predicted RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	MRI1	Q06489	411 aa	Known RBP	3.18	□□□□□ -1.9
SHH3	YMR118C	YPD1	Q07688	167 aa		3.18	□□□□□ -1.9
SHH3	YMR118C	SDO1	Q07953	250 aa	Known RBP	3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 147.7 ms