RNA–Protein interactions for RNA: YLR439W

MRPL4, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL4, Length 960 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL4	YLR439W	SLT2	Q00772	484 aa		4.63	□□□□□ -1.67
MRPL4	YLR439W	YPL068C	Q02749	293 aa		4.63	□□□□□ -1.67
MRPL4	YLR439W	LDS2	Q08218	356 aa		4.63	□□□□□ -1.67
MRPL4	YLR439W	YLR053C	Q12026	108 aa		4.63	□□□□□ -1.67
MRPL4	YLR439W	NCA2	Q12374	616 aa		4.63	□□□□□ -1.67
MRPL4	YLR439W	TPK3	P05986	398 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	RPL20A	P0CX23	172 aa	Known RBP	4.62	□□□□□ -1.67
MRPL4	YLR439W	RPL20B	P0CX24	172 aa	Predicted RBP	4.62	□□□□□ -1.67
MRPL4	YLR439W	RPB4	P20433	221 aa	Predicted RBP	4.62	□□□□□ -1.67
MRPL4	YLR439W	CDC39	P25655	2108 aa	Known RBP	4.62	□□□□□ -1.67
MRPL4	YLR439W	HMX1	P32339	317 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	MAL32	P38158	584 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	YBR032W	P38223	100 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	TDA11	P38854	504 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	YHC3	P47040	408 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	STE24	P47154	453 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	SDT1	P53078	280 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	YGL114W	P53134	725 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	FAR10	Q06001	478 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	APC9	Q12107	265 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	RUD3	Q12234	484 aa	Known RBP	4.62	□□□□□ -1.67
MRPL4	YLR439W	YPR011C	Q12251	326 aa		4.62	□□□□□ -1.67
MRPL4	YLR439W	VPS63	O13549	108 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	CDC36	P06100	191 aa	Predicted RBP	4.61	□□□□□ -1.67
MRPL4	YLR439W	HXT2	P23585	541 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	MSK1	P32048	576 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	PMU1	P36069	295 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	RIB5	P38145	238 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	PHO89	P38361	574 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	SSO2	P39926	295 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	LSM4	P40070	187 aa	Known RBP	4.61	□□□□□ -1.67
MRPL4	YLR439W	RPL10	P41805	221 aa	Known RBP	4.61	□□□□□ -1.67
MRPL4	YLR439W	SEC27	P41811	889 aa	Known RBP	4.61	□□□□□ -1.67
MRPL4	YLR439W	GCD14	P46959	383 aa	Predicted RBP	4.61	□□□□□ -1.67
MRPL4	YLR439W	CAF40	P53829	373 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	SPR6	Q01684	191 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	NUP116	Q02630	1113 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	RPM2	Q02773	1202 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	CSN9	Q03981	162 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	FAR8	Q05040	523 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	ESA1	Q08649	445 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	RGS2	Q99188	309 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	TAD3	Q9URQ3	322 aa		4.61	□□□□□ -1.67
MRPL4	YLR439W	CBP2	P03874	630 aa	Predicted RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	HEM2	P05373	342 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	GCD2	P12754	651 aa	Predicted RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	PTM1	P32857	523 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	LIN1	P38852	340 aa	Predicted RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	ALP1	P38971	573 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	YND1	P40009	630 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	YIL067C	P40514	678 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	ECO1	P43605	281 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	TIS11	P47977	285 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	LSC1	P53598	329 aa	Known RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	GOR1	P53839	350 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	ERV25	P54837	211 aa	Known RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	LSM3	P57743	89 aa	Known RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	YLR177W	Q06251	628 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	RRP40	Q08285	240 aa	Known RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	SNX3	Q08826	162 aa	Known RBP	4.6	□□□□□ -1.67
MRPL4	YLR439W	AYT1	Q12226	474 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	SET6	Q12529	373 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	YOS9	Q99220	542 aa		4.6	□□□□□ -1.67
MRPL4	YLR439W	MRS3	P10566	314 aa		4.59	□□□□□ -1.67
MRPL4	YLR439W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
MRPL4	YLR439W	DBR1	P24309	405 aa	Known RBP	4.59	□□□□□ -1.67
MRPL4	YLR439W	ATS1	P31386	333 aa		4.59	□□□□□ -1.67
MRPL4	YLR439W	MNN5	P46982	586 aa		4.59	□□□□□ -1.67
MRPL4	YLR439W	LIA1	P47120	325 aa	Known RBP	4.59	□□□□□ -1.67
MRPL4	YLR439W	SHY1	P53266	389 aa		4.59	□□□□□ -1.67
MRPL4	YLR439W	SKI8	Q02793	397 aa	Predicted RBP	4.59	□□□□□ -1.67
MRPL4	YLR439W	GOT1	Q03554	138 aa		4.59	□□□□□ -1.67
MRPL4	YLR439W	CGI121	Q03705	181 aa	Known RBP	4.59	□□□□□ -1.67
MRPL4	YLR439W	YPR174C	Q06616	221 aa	Predicted RBP	4.59	□□□□□ -1.67
MRPL4	YLR439W	TPT1	Q12272	230 aa	Known RBP	4.59	□□□□□ -1.67
MRPL4	YLR439W	RRP36	Q12481	300 aa	Predicted RBP	4.59	□□□□□ -1.67
MRPL4	YLR439W	YPL247C	Q12523	523 aa		4.59	□□□□□ -1.67
MRPL4	YLR439W	FSH3	Q99369	266 aa		4.59	□□□□□ -1.67
MRPL4	YLR439W	RPL15A	P05748	204 aa	Known RBP	4.58	□□□□□ -1.68
MRPL4	YLR439W	YLL053C	P0CD98	152 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	RNA1	P11745	407 aa	Known RBP	4.58	□□□□□ -1.68
MRPL4	YLR439W	GAL3	P13045	520 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	ATR1	P13090	542 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	PHA2	P32452	334 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	PPQ1	P32945	549 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	RIB7	P33312	244 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	LOS1	P33418	1100 aa	Predicted RBP	4.58	□□□□□ -1.68
MRPL4	YLR439W	SDH3	P33421	198 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	NAT2	P37293	288 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	LYS12	P40495	371 aa	Known RBP	4.58	□□□□□ -1.68
MRPL4	YLR439W	RPR2	P40571	144 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	OST1	P41543	476 aa	Known RBP	4.58	□□□□□ -1.68
MRPL4	YLR439W	SFH5	P47008	294 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	EMC2	P47133	292 aa	Known RBP	4.58	□□□□□ -1.68
MRPL4	YLR439W	YJR141W	P47172	347 aa	Predicted RBP	4.58	□□□□□ -1.68
MRPL4	YLR439W	TOS2	P50078	622 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	AIF1	P52923	378 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	MAL12	P53341	584 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	MKC7	P53379	596 aa		4.58	□□□□□ -1.68
MRPL4	YLR439W	YMR181C	Q03231	154 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms