RNA–Protein interactions for RNA: YLR178C

TFS1, Transcript of Inhibitor of carboxypeptidase Y (Prc1p), and Ras GAP (Ira2p), yeast

Gene TFS1, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFS1	YLR178C	MTL1	P53214	551 aa		4.87	□□□□□ -1.63
TFS1	YLR178C	RVB1	Q03940	463 aa	Known RBP	4.87	□□□□□ -1.63
TFS1	YLR178C	MED2	Q12124	431 aa		4.87	□□□□□ -1.63
TFS1	YLR178C	YDL180W	Q12301	547 aa		4.87	□□□□□ -1.63
TFS1	YLR178C	RIB3	Q99258	208 aa		4.87	□□□□□ -1.63
TFS1	YLR178C	CDC36	P06100	191 aa	Predicted RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	TRP4	P07285	380 aa	Predicted RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	CAR2	P07991	424 aa	Known RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	SPO7	P18410	259 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	RPB8	P20436	146 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	FAR1	P21268	830 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	MAK32	P23060	363 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	SCO1	P23833	295 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	POL4	P25615	582 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	PRE4	P30657	266 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	MSN4	P33749	630 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	SDS22	P36047	338 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	MRPL39	P36533	70 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	GDI1	P39958	451 aa	Known RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	RFC4	P40339	323 aa	Known RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	YRB2	P40517	327 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	SWP82	P43554	623 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	PUS4	P48567	403 aa	Known RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	YGL235W	P53071	178 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	KAP120	Q02932	1032 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	SNZ1	Q03148	297 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	SCS7	Q03529	384 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	YPR147C	Q06522	304 aa	Known RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	HRT1	Q08273	121 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	NIP7	Q08962	181 aa	Known RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	RCN2	Q12044	265 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	RTC5	Q12108	567 aa	Known RBP	4.86	□□□□□ -1.63
TFS1	YLR178C	POM34	Q12445	299 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	YOR343C	Q12484	108 aa		4.86	□□□□□ -1.63
TFS1	YLR178C	TPK3	P05986	398 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	RHO1	P06780	209 aa	Known RBP	4.85	□□□□□ -1.63
TFS1	YLR178C	DPM1	P14020	267 aa	Known RBP	4.85	□□□□□ -1.63
TFS1	YLR178C	TFS1	P14306	219 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
TFS1	YLR178C	MTC7	P32633	139 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	COS9	P36034	407 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	RRG9	P40156	214 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	ADO1	P47143	340 aa	Known RBP	4.85	□□□□□ -1.63
TFS1	YLR178C	MPP6	P53725	186 aa	Predicted RBP	4.85	□□□□□ -1.63
TFS1	YLR178C	ASI1	P54074	624 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	NUP116	Q02630	1113 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	SMP3	Q04174	516 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	DLT1	Q04216	342 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	HLR1	Q04429	423 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	RAF1	Q06891	181 aa		4.85	□□□□□ -1.63
TFS1	YLR178C	MSW1	P04803	379 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	MET3	P08536	511 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	PRB1	P09232	635 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	NFT1	P0CE68	1218 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	RPL35A	P0CX84	120 aa	Known RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	RPL35B	P0CX85	120 aa	Known RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	DBF20	P32328	564 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	MCM10	P32354	571 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	KRE6	P32486	720 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	CYS4	P32582	507 aa	Known RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	YME2	P32843	850 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	SOF1	P33750	489 aa	Known RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	RTC2	P38279	296 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	YMR262W	P38430	313 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	ARN2	P38724	620 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	CHL4	P38907	458 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	ALP1	P38971	573 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	PHO90	P39535	881 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	NAS2	P40555	220 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	IDP2	P41939	412 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	DPB11	P47027	764 aa	Predicted RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	BUL1	P48524	976 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	NQM1	P53228	333 aa	Predicted RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	COG5	P53951	403 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	MOT3	P54785	490 aa	Known RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	MRP51	Q02950	344 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	HOT1	Q03213	719 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	YMD8	Q03697	442 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	SPC19	Q03954	165 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	MRPL1	Q04599	285 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	COQ11	Q05892	277 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	RGC1	Q06108	1083 aa	Known RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	CTS2	Q06350	511 aa		4.84	□□□□□ -1.63
TFS1	YLR178C	FOL3	Q12676	427 aa	Predicted RBP	4.84	□□□□□ -1.63
TFS1	YLR178C	MEC1	P38111	2368 aa		4.84	□□□□□ -1.64
TFS1	YLR178C	HEM4	P06174	275 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	SEC12	P11655	471 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	GIT1	P25346	518 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	KRR1	P25586	316 aa	Predicted RBP	4.83	□□□□□ -1.64
TFS1	YLR178C	PRP21	P32524	280 aa	Predicted RBP	4.83	□□□□□ -1.64
TFS1	YLR178C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
TFS1	YLR178C	CDS1	P38221	457 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	VBA2	P38358	474 aa	Known RBP	4.83	□□□□□ -1.64
TFS1	YLR178C	MLH1	P38920	769 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	YER184C	P39961	794 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	ISC1	P40015	477 aa	Known RBP	4.83	□□□□□ -1.64
TFS1	YLR178C	PRE6	P40303	254 aa	Known RBP	4.83	□□□□□ -1.64
TFS1	YLR178C	STB1	P42845	420 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	SFH5	P47008	294 aa		4.83	□□□□□ -1.64
TFS1	YLR178C	HMS2	P47175	358 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms