RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeastyeast

Gene URM1, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URM1YIL008W SSU72P53538 206 aaPredicted RBP1.24□□□□□ -2.21
URM1YIL008W BIO4P53630 237 aa1.24□□□□□ -2.21
URM1YIL008W PBP4Q07362 185 aaKnown RBP1.24□□□□□ -2.21
URM1YIL008W PLB3Q08108 686 aa1.24□□□□□ -2.21
URM1YIL008W ATG5Q12380 294 aa1.24□□□□□ -2.21
URM1YIL008W MMS1Q06211 1407 aa1.23□□□□□ -2.21
URM1YIL008W OSM1P21375 501 aaKnown RBP1.23□□□□□ -2.21
URM1YIL008W SPL2P38839 148 aa1.23□□□□□ -2.21
URM1YIL008W YJR141WP47172 347 aaPredicted RBP1.23□□□□□ -2.21
URM1YIL008W OST3P48439 350 aa1.23□□□□□ -2.21
URM1YIL008W DSK2P48510 373 aa1.23□□□□□ -2.21
URM1YIL008W TPN1P53099 579 aa1.23□□□□□ -2.21
URM1YIL008W MRS2Q01926 470 aa1.23□□□□□ -2.21
URM1YIL008W RDS3Q06835 107 aaPredicted RBP1.23□□□□□ -2.21
URM1YIL008W VPS68Q12016 184 aa1.23□□□□□ -2.21
URM1YIL008W PAA1Q12447 191 aaKnown RBP1.23□□□□□ -2.21
URM1YIL008W MYO2P19524 1574 aaKnown RBP1.22□□□□□ -2.21
URM1YIL008W ATG2P53855 1592 aa1.22□□□□□ -2.21
URM1YIL008W BNI1P41832 1953 aa1.22□□□□□ -2.21
URM1YIL008W CDC37P06101 506 aaKnown RBP1.22□□□□□ -2.21
URM1YIL008W RAD7P06779 565 aa1.22□□□□□ -2.21
URM1YIL008W RPL31AP0C2H8 113 aaKnown RBP1.22□□□□□ -2.21
URM1YIL008W MSS116P15424 664 aaKnown RBP1.22□□□□□ -2.21
URM1YIL008W AEP1P32493 518 aa1.22□□□□□ -2.21
URM1YIL008W SWC5P38326 303 aa1.22□□□□□ -2.21
URM1YIL008W SUR2P38992 349 aa1.22□□□□□ -2.21
URM1YIL008W FET3P38993 636 aa1.22□□□□□ -2.21
URM1YIL008W AIM20P40451 204 aa1.22□□□□□ -2.21
URM1YIL008W SWT21P53873 357 aaPredicted RBP1.22□□□□□ -2.21
URM1YIL008W CGI121Q03705 181 aaKnown RBP1.22□□□□□ -2.21
URM1YIL008W CAB5Q03941 241 aa1.22□□□□□ -2.21
URM1YIL008W YLL007CQ07799 665 aa1.22□□□□□ -2.21
URM1YIL008W TY3A-GQ12173 290 aa1.22□□□□□ -2.21
URM1YIL008W RRP42Q12277 265 aaPredicted RBP1.22□□□□□ -2.21
URM1YIL008W YPR1Q12458 312 aa1.22□□□□□ -2.21
URM1YIL008W TY3A-IQ99219 290 aa1.22□□□□□ -2.21
URM1YIL008W UFD4P33202 1483 aa1.22□□□□□ -2.21
URM1YIL008W GEA2P39993 1459 aaKnown RBP1.22□□□□□ -2.21
URM1YIL008W CDC25P04821 1589 aa1.21□□□□□ -2.22
URM1YIL008W DNF1P32660 1571 aa1.21□□□□□ -2.22
URM1YIL008W RPL26AP05743 127 aaKnown RBP1.21□□□□□ -2.22
URM1YIL008W SWI3P32591 825 aa1.21□□□□□ -2.22
URM1YIL008W END3P39013 349 aa1.21□□□□□ -2.22
URM1YIL008W AVT7P40501 490 aa1.21□□□□□ -2.22
URM1YIL008W GDS1P41913 522 aa1.21□□□□□ -2.22
URM1YIL008W RPL26BP53221 127 aaKnown RBP1.21□□□□□ -2.22
URM1YIL008W SUE1Q06524 206 aa1.21□□□□□ -2.22
URM1YIL008W APC9Q12107 265 aa1.21□□□□□ -2.22
URM1YIL008W YPR064WQ12492 139 aa1.21□□□□□ -2.22
URM1YIL008W DRS2P39524 1355 aa1.21□□□□□ -2.22
URM1YIL008W RPA190P10964 1664 aaKnown RBP1.2□□□□□ -2.22
URM1YIL008W CHD1P32657 1468 aa1.2□□□□□ -2.22
URM1YIL008W DPM1P14020 267 aaKnown RBP1.2□□□□□ -2.22
URM1YIL008W COY1P34237 679 aa1.2□□□□□ -2.22
URM1YIL008W SWD2P36104 329 aaPredicted RBP1.2□□□□□ -2.22
URM1YIL008W SHQ1P40486 507 aaPredicted RBP1.2□□□□□ -2.22
URM1YIL008W RPE1P46969 238 aa1.2□□□□□ -2.22
URM1YIL008W COX16P47081 118 aa1.2□□□□□ -2.22
URM1YIL008W MPP10P47083 593 aaKnown RBP1.2□□□□□ -2.22
URM1YIL008W YPT32P51996 222 aaKnown RBP1.2□□□□□ -2.22
URM1YIL008W YMR166CQ03829 368 aa1.2□□□□□ -2.22
URM1YIL008W GRH1Q04410 372 aaKnown RBP1.2□□□□□ -2.22
URM1YIL008W MYO5Q04439 1219 aaKnown RBP1.2□□□□□ -2.22
URM1YIL008W FCF1Q05498 189 aaPredicted RBP1.2□□□□□ -2.22
URM1YIL008W SPO77Q06134 477 aa1.2□□□□□ -2.22
URM1YIL008W TAZ1Q06510 381 aa1.2□□□□□ -2.22
URM1YIL008W AGC1Q12482 902 aa1.2□□□□□ -2.22
URM1YIL008W SSK2P53599 1579 aa1.2□□□□□ -2.22
URM1YIL008W SPT7P35177 1332 aa1.19□□□□□ -2.22
URM1YIL008W RPO31P04051 1460 aa1.19□□□□□ -2.22
URM1YIL008W PAN1P32521 1480 aa1.19□□□□□ -2.22
URM1YIL008W PET18P25362 215 aa1.19□□□□□ -2.22
URM1YIL008W COT1P32798 439 aa1.19□□□□□ -2.22
URM1YIL008W BLI1P35727 113 aa1.19□□□□□ -2.22
URM1YIL008W PHO89P38361 574 aa1.19□□□□□ -2.22
URM1YIL008W SEN34P39707 275 aa1.19□□□□□ -2.22
URM1YIL008W SSO2P39926 295 aa1.19□□□□□ -2.22
URM1YIL008W YJR146WP47174 117 aa1.19□□□□□ -2.22
URM1YIL008W BAT2P47176 376 aaKnown RBP1.19□□□□□ -2.22
URM1YIL008W DAN1P47178 298 aa1.19□□□□□ -2.22
URM1YIL008W YPL077CQ02831 240 aa1.19□□□□□ -2.22
URM1YIL008W YML018CQ03730 393 aa1.19□□□□□ -2.22
URM1YIL008W VPS20Q04272 221 aa1.19□□□□□ -2.22
URM1YIL008W YMR111CQ04461 462 aaPredicted RBP1.19□□□□□ -2.22
URM1YIL008W YLR297WQ05899 129 aa1.19□□□□□ -2.22
URM1YIL008W CTS2Q06350 511 aa1.19□□□□□ -2.22
URM1YIL008W YPL150WQ12152 901 aa1.19□□□□□ -2.22
URM1YIL008W SIA1Q12212 622 aa1.19□□□□□ -2.22
URM1YIL008W NUP157P40064 1391 aaKnown RBP1.19□□□□□ -2.22
URM1YIL008W YPK9Q12697 1472 aa1.18□□□□□ -2.22
URM1YIL008W RKR1Q04781 1562 aa1.18□□□□□ -2.22
URM1YIL008W CAR2P07991 424 aaKnown RBP1.18□□□□□ -2.22
URM1YIL008W RPL5P26321 297 aaKnown RBP1.18□□□□□ -2.22
URM1YIL008W KRE6P32486 720 aa1.18□□□□□ -2.22
URM1YIL008W RPS0AP32905 252 aaKnown RBP1.18□□□□□ -2.22
URM1YIL008W YKL063CP35725 167 aa1.18□□□□□ -2.22
URM1YIL008W NRG2P38082 220 aa1.18□□□□□ -2.22
URM1YIL008W POP8P38208 133 aa1.18□□□□□ -2.22
URM1YIL008W CDC40P40968 455 aaPredicted RBP1.18□□□□□ -2.22
URM1YIL008W COG7P53195 279 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms