RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C SNL1P40548 159 aa11.42□□□□□ -0.58
SHU1YHL006C EGT2P42835 1041 aa11.42□□□□□ -0.58
SHU1YHL006C YJL055WP47044 245 aa11.42□□□□□ -0.58
SHU1YHL006C NNT1Q05874 261 aa11.42□□□□□ -0.58
SHU1YHL006C ATR1P13090 542 aa11.41□□□□□ -0.58
SHU1YHL006C APL3P38065 1025 aa11.41□□□□□ -0.58
SHU1YHL006C YBR138CP38277 524 aa11.41□□□□□ -0.58
SHU1YHL006C SWP82P43554 623 aa11.41□□□□□ -0.58
SHU1YHL006C MOT3P54785 490 aaKnown RBP11.41□□□□□ -0.58
SHU1YHL006C LAP3Q01532 483 aaKnown RBP RIP-Chip data11.41□□□□□ -0.58not detected
SHU1YHL006C YMR099CQ03161 297 aaKnown RBP11.41□□□□□ -0.58
SHU1YHL006C HOT1Q03213 719 aa11.41□□□□□ -0.58
SHU1YHL006C YMR279CQ03263 540 aa11.41□□□□□ -0.58
SHU1YHL006C YLR040CQ07988 224 aa11.41□□□□□ -0.58
SHU1YHL006C COX5BP00425 151 aa11.4□□□□□ -0.58
SHU1YHL006C BOS1P25385 244 aa11.4□□□□□ -0.58
SHU1YHL006C SRP102P36057 244 aaPredicted RBP11.4□□□□□ -0.58
SHU1YHL006C ECM8P38246 354 aa11.4□□□□□ -0.58
SHU1YHL006C SBH2P52871 88 aa11.4□□□□□ -0.58
SHU1YHL006C PEF1P53238 335 aa11.4□□□□□ -0.58
SHU1YHL006C CIK1Q01649 594 aa11.4□□□□□ -0.58
SHU1YHL006C AIM36Q03798 255 aa11.4□□□□□ -0.58
SHU1YHL006C YPL119C-AQ3E751 87 aa11.4□□□□□ -0.58
SHU1YHL006C RPS23AP0CX29 145 aaKnown RBP11.39□□□□□ -0.59
SHU1YHL006C RPS23BP0CX30 145 aa11.39□□□□□ -0.59
SHU1YHL006C GLC7P32598 312 aaKnown RBP11.39□□□□□ -0.59
SHU1YHL006C MNS1P32906 549 aa11.39□□□□□ -0.59
SHU1YHL006C RPC34P32910 317 aa11.39□□□□□ -0.59
SHU1YHL006C COS10P52924 374 aa11.39□□□□□ -0.59
SHU1YHL006C NQM1P53228 333 aaPredicted RBP11.39□□□□□ -0.59
SHU1YHL006C YMD8Q03697 442 aa11.39□□□□□ -0.59
SHU1YHL006C YDR391CQ04170 232 aa11.39□□□□□ -0.59
SHU1YHL006C YGR161W-CQ3E744 92 aa11.39□□□□□ -0.59
SHU1YHL006C URA2P07259 2214 aaKnown RBP11.39□□□□□ -0.59
SHU1YHL006C CLG1P35190 452 aa11.38□□□□□ -0.59
SHU1YHL006C SHM2P37291 469 aaKnown RBP11.38□□□□□ -0.59
SHU1YHL006C YER121WP40076 114 aa11.38□□□□□ -0.59
SHU1YHL006C YIR020CP40575 100 aa11.38□□□□□ -0.59
SHU1YHL006C NCA3P46955 337 aa11.38□□□□□ -0.59
SHU1YHL006C LOH1P47055 219 aa11.38□□□□□ -0.59
SHU1YHL006C COG5P53951 403 aa11.38□□□□□ -0.59
SHU1YHL006C SNZ1Q03148 297 aa11.38□□□□□ -0.59
SHU1YHL006C RTR2Q12378 196 aa11.38□□□□□ -0.59
SHU1YHL006C RRI1Q12468 440 aa11.38□□□□□ -0.59
SHU1YHL006C SCEIP03882 235 aa11.37□□□□□ -0.59
SHU1YHL006C MEK1P24719 497 aaPredicted RBP11.37□□□□□ -0.59
SHU1YHL006C PUB1P32588 453 aaKnown RBP RIP-Chip data11.37□□□□□ -0.59not detected
SHU1YHL006C YHL044WP38727 235 aa11.37□□□□□ -0.59
SHU1YHL006C FLX1P40464 311 aa11.37□□□□□ -0.59
SHU1YHL006C SNA4Q07549 140 aa11.37□□□□□ -0.59
SHU1YHL006C KIN28P06242 306 aa11.36□□□□□ -0.59
SHU1YHL006C MDJ2P42834 146 aa11.36□□□□□ -0.59
SHU1YHL006C BRE4Q07660 1125 aa11.36□□□□□ -0.59
SHU1YHL006C RRS1Q08746 203 aaKnown RBP11.36□□□□□ -0.59
SHU1YHL006C FSH3Q99369 266 aa11.36□□□□□ -0.59
SHU1YHL006C DSF1P0CX08 502 aa11.35□□□□□ -0.59
SHU1YHL006C YNR073CP0CX09 502 aa11.35□□□□□ -0.59
SHU1YHL006C VOA1P53262 265 aa11.35□□□□□ -0.59
SHU1YHL006C YLR345WQ06137 509 aa11.35□□□□□ -0.59
SHU1YHL006C AIM6Q07716 390 aa11.35□□□□□ -0.59
SHU1YHL006C PST2Q12335 198 aaKnown RBP11.35□□□□□ -0.59
SHU1YHL006C PCL9Q12477 304 aa11.35□□□□□ -0.59
SHU1YHL006C DBF2P22204 572 aa11.34□□□□□ -0.59
SHU1YHL006C DTR1P38125 572 aa11.34□□□□□ -0.59
SHU1YHL006C GLR1P41921 483 aaKnown RBP11.34□□□□□ -0.59
SHU1YHL006C MRX8Q05473 314 aa11.34□□□□□ -0.59
SHU1YHL006C RDL1Q12305 139 aaKnown RBP11.34□□□□□ -0.59
SHU1YHL006C RAS1P01119 309 aa11.33□□□□□ -0.6
SHU1YHL006C RPL6BP05739 176 aaKnown RBP11.33□□□□□ -0.6
SHU1YHL006C FUN19P28003 413 aaPredicted RBP11.33□□□□□ -0.6
SHU1YHL006C SAY1P53324 424 aa11.33□□□□□ -0.6
SHU1YHL006C BUD17P53727 317 aa11.33□□□□□ -0.6
SHU1YHL006C RSM23Q01163 450 aa11.33□□□□□ -0.6
SHU1YHL006C GRX5Q02784 150 aa11.33□□□□□ -0.6
SHU1YHL006C REP1P03871 373 aa11.32□□□□□ -0.6
SHU1YHL006C PDE2P06776 526 aa11.32□□□□□ -0.6
SHU1YHL006C FPS1P23900 669 aa11.32□□□□□ -0.6
SHU1YHL006C RPS5P26783 225 aaKnown RBP11.32□□□□□ -0.6
SHU1YHL006C SUR1P33300 382 aa11.32□□□□□ -0.6
SHU1YHL006C TAT1P38085 619 aa11.32□□□□□ -0.6
SHU1YHL006C DIG2Q03373 323 aaKnown RBP11.32□□□□□ -0.6
SHU1YHL006C YMR315WQ04869 349 aaKnown RBP11.32□□□□□ -0.6
SHU1YHL006C SSK1Q07084 712 aa11.32□□□□□ -0.6
SHU1YHL006C MEU1Q07938 337 aaKnown RBP RIP-Chip data11.32□□□□□ -0.6not detected
SHU1YHL006C LSO1Q3E827 93 aa11.32□□□□□ -0.6
SHU1YHL006C HNM1P19807 563 aa11.31□□□□□ -0.6
SHU1YHL006C IPT1P38954 527 aa11.31□□□□□ -0.6
SHU1YHL006C ECM1P39715 212 aa11.31□□□□□ -0.6
SHU1YHL006C TIR3P40552 269 aa11.31□□□□□ -0.6
SHU1YHL006C OST1P41543 476 aaKnown RBP11.31□□□□□ -0.6
SHU1YHL006C RET2P43621 546 aa11.31□□□□□ -0.6
SHU1YHL006C YNL046WP53956 172 aa11.31□□□□□ -0.6
SHU1YHL006C MSS11Q03825 758 aa11.31□□□□□ -0.6
SHU1YHL006C YPR097WQ06839 1073 aa11.31□□□□□ -0.6
SHU1YHL006C MES1P00958 751 aaKnown RBP11.3□□□□□ -0.6
SHU1YHL006C MET3P08536 511 aa11.3□□□□□ -0.6
SHU1YHL006C ARO3P14843 370 aaKnown RBP11.3□□□□□ -0.6
SHU1YHL006C YPK3P38070 525 aa11.3□□□□□ -0.6
SHU1YHL006C MSS4P38994 779 aa11.3□□□□□ -0.6
SHU1YHL006C YCK3P39962 524 aa11.3□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms