RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W HMS1Q12398 434 aa2.93□□□□□ -1.94
PTI1YGR156W RPC37P36121 282 aa2.92□□□□□ -1.94
PTI1YGR156W TAE1P38340 232 aa2.92□□□□□ -1.94
PTI1YGR156W NPT1P39683 429 aaKnown RBP2.92□□□□□ -1.94
PTI1YGR156W MIG3P39943 394 aa2.92□□□□□ -1.94
PTI1YGR156W OXA1P39952 402 aa2.92□□□□□ -1.94
PTI1YGR156W ALD5P40047 520 aaKnown RBP2.92□□□□□ -1.94
PTI1YGR156W UTP18P40362 594 aaPredicted RBP2.92□□□□□ -1.94
PTI1YGR156W YJR054WP47114 497 aa2.92□□□□□ -1.94
PTI1YGR156W VHT1P53241 593 aa2.92□□□□□ -1.94
PTI1YGR156W YMR010WQ03687 405 aa2.92□□□□□ -1.94
PTI1YGR156W GAS2Q06135 555 aa2.92□□□□□ -1.94
PTI1YGR156W BOP2Q06150 570 aa2.92□□□□□ -1.94
PTI1YGR156W YLR446WQ06204 433 aa2.92□□□□□ -1.94
PTI1YGR156W YLR173WQ06247 608 aa2.92□□□□□ -1.94
PTI1YGR156W DTD1Q07648 150 aaKnown RBP2.92□□□□□ -1.94
PTI1YGR156W YPQ1Q12010 308 aa2.92□□□□□ -1.94
PTI1YGR156W HRT3Q12347 344 aa2.92□□□□□ -1.94
PTI1YGR156W FLO11P08640 1367 aa2.91□□□□□ -1.94
PTI1YGR156W RPS14AP06367 137 aaKnown RBP2.91□□□□□ -1.94
PTI1YGR156W STE7P06784 515 aa2.91□□□□□ -1.94
PTI1YGR156W PRB1P09232 635 aa2.91□□□□□ -1.94
PTI1YGR156W CTA1P15202 515 aa2.91□□□□□ -1.94
PTI1YGR156W AAT2P23542 418 aaKnown RBP2.91□□□□□ -1.94
PTI1YGR156W RVS161P25343 265 aaKnown RBP2.91□□□□□ -1.94
PTI1YGR156W DEP1P31385 405 aa2.91□□□□□ -1.94
PTI1YGR156W YEL045CP32616 141 aa2.91□□□□□ -1.94
PTI1YGR156W YPC1P38298 316 aa2.91□□□□□ -1.94
PTI1YGR156W HSM3P38348 480 aa2.91□□□□□ -1.94
PTI1YGR156W RPS14BP39516 138 aaKnown RBP2.91□□□□□ -1.94
PTI1YGR156W YFH7P43591 353 aa2.91□□□□□ -1.94
PTI1YGR156W MRX5P47007 382 aa2.91□□□□□ -1.94
PTI1YGR156W SLT2Q00772 484 aa2.91□□□□□ -1.94
PTI1YGR156W SRL4Q03085 281 aa2.91□□□□□ -1.94
PTI1YGR156W COX20Q04935 205 aa2.91□□□□□ -1.94
PTI1YGR156W YLR177WQ06251 628 aa2.91□□□□□ -1.94
PTI1YGR156W UTP23Q12339 254 aaKnown RBP2.91□□□□□ -1.94
PTI1YGR156W IZH4Q99393 312 aa2.91□□□□□ -1.94
PTI1YGR156W SPS100P13130 326 aa2.9□□□□□ -1.95
PTI1YGR156W ZRC1P20107 442 aa2.9□□□□□ -1.95
PTI1YGR156W CDC50P25656 391 aa2.9□□□□□ -1.95
PTI1YGR156W IMP3P32899 183 aaPredicted RBP2.9□□□□□ -1.95
PTI1YGR156W KTI12P34253 313 aaKnown RBP2.9□□□□□ -1.95
PTI1YGR156W YKL063CP35725 167 aa2.9□□□□□ -1.95
PTI1YGR156W PET8P38921 284 aa2.9□□□□□ -1.95
PTI1YGR156W TIM17P39515 158 aa2.9□□□□□ -1.95
PTI1YGR156W YPT32P51996 222 aaKnown RBP2.9□□□□□ -1.95
PTI1YGR156W MNT4P53745 580 aa2.9□□□□□ -1.95
PTI1YGR156W KTR6P54070 446 aa2.9□□□□□ -1.95
PTI1YGR156W GPN3Q06543 272 aa2.9□□□□□ -1.95
PTI1YGR156W YOR376WQ08900 122 aa2.9□□□□□ -1.95
PTI1YGR156W RBD2Q12270 262 aa2.9□□□□□ -1.95
PTI1YGR156W SWI1P09547 1314 aa2.9□□□□□ -1.95
PTI1YGR156W YSR3P23501 404 aa2.89□□□□□ -1.95
PTI1YGR156W URA10P30402 227 aa2.89□□□□□ -1.95
PTI1YGR156W SKG6P32900 734 aaPredicted RBP2.89□□□□□ -1.95
PTI1YGR156W CBF5P33322 483 aaKnown RBP RIP-Chip data2.89□□□□□ -1.95not detected
PTI1YGR156W SHE3P38272 425 aaKnown RBP2.89□□□□□ -1.95
PTI1YGR156W PEX22P39718 180 aa2.89□□□□□ -1.95
PTI1YGR156W SDS23P53172 527 aa2.89□□□□□ -1.95
PTI1YGR156W CDH1P53197 566 aa2.89□□□□□ -1.95
PTI1YGR156W SWC4P53201 476 aa2.89□□□□□ -1.95
PTI1YGR156W YNL134CP53912 376 aaKnown RBP2.89□□□□□ -1.95
PTI1YGR156W CDC14Q00684 551 aa2.89□□□□□ -1.95
PTI1YGR156W ENT5Q03769 411 aaKnown RBP2.89□□□□□ -1.95
PTI1YGR156W VBA1Q04301 562 aa2.89□□□□□ -1.95
PTI1YGR156W CTS2Q06350 511 aa2.89□□□□□ -1.95
PTI1YGR156W ASR1Q06834 288 aa2.89□□□□□ -1.95
PTI1YGR156W MED4Q12343 284 aa2.89□□□□□ -1.95
PTI1YGR156W WTM1Q12363 437 aaKnown RBP2.89□□□□□ -1.95
PTI1YGR156W YBL111CQ3E7Y5 667 aa2.89□□□□□ -1.95
PTI1YGR156W TFS1P14306 219 aa2.88□□□□□ -1.95
PTI1YGR156W RRT12P25381 491 aa2.88□□□□□ -1.95
PTI1YGR156W CWP1P28319 239 aa2.88□□□□□ -1.95
PTI1YGR156W ZIP1P31111 875 aa2.88□□□□□ -1.95
PTI1YGR156W ARO4P32449 370 aaKnown RBP2.88□□□□□ -1.95
PTI1YGR156W YKL187CP34231 750 aa2.88□□□□□ -1.95
PTI1YGR156W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
PTI1YGR156W MRPL10P36520 322 aa2.88□□□□□ -1.95
PTI1YGR156W PFS1P38872 237 aa2.88□□□□□ -1.95
PTI1YGR156W COA1P40452 197 aa2.88□□□□□ -1.95
PTI1YGR156W YJL118WP47022 219 aa2.88□□□□□ -1.95
PTI1YGR156W PGU1P47180 361 aa2.88□□□□□ -1.95
PTI1YGR156W YMR209CQ03648 457 aa2.88□□□□□ -1.95
PTI1YGR156W MIM1Q08176 113 aa2.88□□□□□ -1.95
PTI1YGR156W RUD3Q12234 484 aaKnown RBP2.88□□□□□ -1.95
PTI1YGR156W YOL107WQ12239 342 aa2.88□□□□□ -1.95
PTI1YGR156W ERP3Q12403 225 aa2.88□□□□□ -1.95
PTI1YGR156W ATG31Q12421 196 aa2.88□□□□□ -1.95
PTI1YGR156W RPP0P05317 312 aaKnown RBP2.87□□□□□ -1.95
PTI1YGR156W SNA3P14359 133 aa2.87□□□□□ -1.95
PTI1YGR156W RPL16BP26785 198 aaKnown RBP2.87□□□□□ -1.95
PTI1YGR156W MRPL6P32904 214 aa2.87□□□□□ -1.95
PTI1YGR156W TIP20P33891 701 aa2.87□□□□□ -1.95
PTI1YGR156W GCN20P43535 752 aaKnown RBP2.87□□□□□ -1.95
PTI1YGR156W LIA1P47120 325 aaKnown RBP2.87□□□□□ -1.95
PTI1YGR156W SDT1P53078 280 aa2.87□□□□□ -1.95
PTI1YGR156W TPN1P53099 579 aa2.87□□□□□ -1.95
PTI1YGR156W TIM21P53220 239 aa2.87□□□□□ -1.95
PTI1YGR156W TPS1Q00764 495 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms