RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W HMT1P38074 348 aa7.43□□□□□ -1.22
UFD1YGR048W YBR053CP38235 358 aa7.43□□□□□ -1.22
UFD1YGR048W SHE3P38272 425 aaKnown RBP7.43□□□□□ -1.22
UFD1YGR048W PRP39P39682 629 aaKnown RBP7.43□□□□□ -1.22
UFD1YGR048W FMC1P40491 155 aa7.43□□□□□ -1.22
UFD1YGR048W MOB2P43563 287 aa7.43□□□□□ -1.22
UFD1YGR048W YHC3P47040 408 aa7.43□□□□□ -1.22
UFD1YGR048W FAA4P47912 694 aaKnown RBP7.43□□□□□ -1.22
UFD1YGR048W RNH70P53331 553 aa7.43□□□□□ -1.22
UFD1YGR048W CDC14Q00684 551 aa7.43□□□□□ -1.22
UFD1YGR048W YTM1Q12024 460 aaPredicted RBP7.43□□□□□ -1.22
UFD1YGR048W INP53Q12271 1107 aa7.43□□□□□ -1.22
UFD1YGR048W TRM13Q12383 476 aa7.43□□□□□ -1.22
UFD1YGR048W SNF8Q12483 233 aa7.43□□□□□ -1.22
UFD1YGR048W TIF6Q12522 245 aaKnown RBP7.43□□□□□ -1.22
UFD1YGR048W PRB1P09232 635 aa7.42□□□□□ -1.22
UFD1YGR048W STE4P18851 423 aa7.42□□□□□ -1.22
UFD1YGR048W RER1P25560 188 aa7.42□□□□□ -1.22
UFD1YGR048W YIH1P25637 258 aa7.42□□□□□ -1.22
UFD1YGR048W AAR2P32357 355 aaPredicted RBP7.42□□□□□ -1.22
UFD1YGR048W TCA17P32613 152 aa7.42□□□□□ -1.22
UFD1YGR048W NTF2P33331 125 aaKnown RBP7.42□□□□□ -1.22
UFD1YGR048W YKL069WP36088 180 aa7.42□□□□□ -1.22
UFD1YGR048W MRP21P38175 177 aa7.42□□□□□ -1.22
UFD1YGR048W DBP8P38719 431 aa7.42□□□□□ -1.22
UFD1YGR048W PEX28P38848 579 aa7.42□□□□□ -1.22
UFD1YGR048W VPS52P39904 641 aa7.42□□□□□ -1.22
UFD1YGR048W SSU1P41930 458 aa7.42□□□□□ -1.22
UFD1YGR048W LSB3P43603 459 aaKnown RBP7.42□□□□□ -1.22
UFD1YGR048W YJR011CP47086 261 aaPredicted RBP7.42□□□□□ -1.22
UFD1YGR048W STE24P47154 453 aa7.42□□□□□ -1.22
UFD1YGR048W AMA1P50082 593 aa7.42□□□□□ -1.22
UFD1YGR048W AVT4P50944 713 aa7.42□□□□□ -1.22
UFD1YGR048W YGR151CP53287 111 aa7.42□□□□□ -1.22
UFD1YGR048W RTT102P53330 157 aa7.42□□□□□ -1.22
UFD1YGR048W YDR366CP87287 132 aa7.42□□□□□ -1.22
UFD1YGR048W GSF2Q04697 403 aaKnown RBP7.42□□□□□ -1.22
UFD1YGR048W IZH3Q07959 543 aa7.42□□□□□ -1.22
UFD1YGR048W YPL257WQ08974 193 aa7.42□□□□□ -1.22
UFD1YGR048W TMS1Q12116 473 aa7.42□□□□□ -1.22
UFD1YGR048W TIR4Q12218 487 aaPredicted RBP7.42□□□□□ -1.22
UFD1YGR048W ATG5Q12380 294 aa7.42□□□□□ -1.22
UFD1YGR048W PRM4Q12498 284 aa7.42□□□□□ -1.22
UFD1YGR048W YPR053CQ6Q5F3 151 aa7.42□□□□□ -1.22
UFD1YGR048W Q0144Q9ZZW2 109 aa7.42□□□□□ -1.22
UFD1YGR048W SNF5P18480 905 aa7.41□□□□□ -1.22
UFD1YGR048W PPH21P23594 369 aa7.41□□□□□ -1.22
UFD1YGR048W YKL075CP36083 450 aa7.41□□□□□ -1.22
UFD1YGR048W FAT1P38225 669 aa7.41□□□□□ -1.22
UFD1YGR048W ICE2P40499 491 aa7.41□□□□□ -1.22
UFD1YGR048W NEO1P40527 1151 aa7.41□□□□□ -1.22
UFD1YGR048W CAT5P41735 233 aa7.41□□□□□ -1.22
UFD1YGR048W VPS73P53142 486 aaKnown RBP7.41□□□□□ -1.22
UFD1YGR048W YNL134CP53912 376 aaKnown RBP7.41□□□□□ -1.22
UFD1YGR048W MET14Q02196 202 aa7.41□□□□□ -1.22
UFD1YGR048W IRC15Q02733 499 aa7.41□□□□□ -1.22
UFD1YGR048W YPL067CQ02754 198 aa7.41□□□□□ -1.22
UFD1YGR048W DIG2Q03373 323 aaKnown RBP7.41□□□□□ -1.22
UFD1YGR048W RIM13Q03792 727 aa7.41□□□□□ -1.22
UFD1YGR048W AVO2Q04749 426 aa7.41□□□□□ -1.22
UFD1YGR048W MSC3Q05812 728 aa7.41□□□□□ -1.22
UFD1YGR048W NOC4Q06512 552 aaPredicted RBP7.41□□□□□ -1.22
UFD1YGR048W REX4Q08237 289 aa7.41□□□□□ -1.22
UFD1YGR048W MMT2Q08970 484 aa7.41□□□□□ -1.22
UFD1YGR048W BTS1Q12051 335 aa7.41□□□□□ -1.22
UFD1YGR048W YLR099W-AQ3E798 87 aa7.41□□□□□ -1.22
UFD1YGR048W FSH3Q99369 266 aa7.41□□□□□ -1.22
UFD1YGR048W Q0010Q9ZZX9 128 aa7.41□□□□□ -1.22
UFD1YGR048W QCR7P00128 127 aa7.4□□□□□ -1.22
UFD1YGR048W COX5BP00425 151 aa7.4□□□□□ -1.22
UFD1YGR048W UBI4P0CG63 381 aaKnown RBP7.4□□□□□ -1.22
UFD1YGR048W RPL40AP0CH08 128 aaKnown RBP7.4□□□□□ -1.22
UFD1YGR048W RPL40BP0CH09 128 aaKnown RBP7.4□□□□□ -1.22
UFD1YGR048W ATG15P25641 520 aa7.4□□□□□ -1.22
UFD1YGR048W SUA7P29055 345 aaPredicted RBP7.4□□□□□ -1.22
UFD1YGR048W ERG1P32476 496 aaKnown RBP7.4□□□□□ -1.22
UFD1YGR048W MGM101P32787 269 aaKnown RBP7.4□□□□□ -1.22
UFD1YGR048W PPG1P32838 368 aa7.4□□□□□ -1.22
UFD1YGR048W EMC3P36039 253 aa7.4□□□□□ -1.22
UFD1YGR048W SHE1P38200 338 aa7.4□□□□□ -1.22
UFD1YGR048W MGE1P38523 228 aa7.4□□□□□ -1.22
UFD1YGR048W CTF8P38877 133 aa7.4□□□□□ -1.22
UFD1YGR048W SKN7P38889 622 aa7.4□□□□□ -1.22
UFD1YGR048W POP1P41812 875 aa7.4□□□□□ -1.22
UFD1YGR048W LOC1P43586 204 aaPredicted RBP7.4□□□□□ -1.22
UFD1YGR048W OST3P48439 350 aa7.4□□□□□ -1.22
UFD1YGR048W MRX6P48564 524 aa7.4□□□□□ -1.22
UFD1YGR048W COG7P53195 279 aa7.4□□□□□ -1.22
UFD1YGR048W YKR011CQ02209 353 aa7.4□□□□□ -1.22
UFD1YGR048W TRM44Q02648 567 aaKnown RBP7.4□□□□□ -1.22
UFD1YGR048W SKY1Q03656 742 aa7.4□□□□□ -1.22
UFD1YGR048W HRD3Q05787 833 aa7.4□□□□□ -1.22
UFD1YGR048W KEI1Q06346 221 aa7.4□□□□□ -1.22
UFD1YGR048W PIN3Q06449 215 aa7.4□□□□□ -1.22
UFD1YGR048W HEM25Q07534 307 aa7.4□□□□□ -1.22
UFD1YGR048W CRD1Q07560 283 aa7.4□□□□□ -1.22
UFD1YGR048W IES4Q08561 116 aa7.4□□□□□ -1.22
UFD1YGR048W RDR1Q08904 546 aa7.4□□□□□ -1.22
UFD1YGR048W YDR056CQ12025 205 aa7.4□□□□□ -1.22
UFD1YGR048W FRE6Q12473 712 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 110.5 ms