RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W CSN9Q03981 162 aa3.69□□□□□ -1.82
UBP6YFR010W YMR034CQ05131 434 aaPredicted RBP3.69□□□□□ -1.82
UBP6YFR010W DPP1Q05521 289 aa3.69□□□□□ -1.82
UBP6YFR010W ECI1Q05871 280 aa3.69□□□□□ -1.82
UBP6YFR010W TPO3Q06451 622 aa3.69□□□□□ -1.82
UBP6YFR010W YLL056CQ12177 298 aa3.69□□□□□ -1.82
UBP6YFR010W RKI1Q12189 258 aa3.69□□□□□ -1.82
UBP6YFR010W FYV7Q12247 151 aa3.69□□□□□ -1.82
UBP6YFR010W ICT1Q12385 394 aa3.69□□□□□ -1.82
UBP6YFR010W FOL3Q12676 427 aaPredicted RBP3.69□□□□□ -1.82
UBP6YFR010W EFG1Q3E705 233 aaKnown RBP3.69□□□□□ -1.82
UBP6YFR010W IZH4Q99393 312 aa3.69□□□□□ -1.82
UBP6YFR010W YOR304C-AO14468 76 aa3.68□□□□□ -1.82
UBP6YFR010W RPL20AP0CX23 172 aaKnown RBP3.68□□□□□ -1.82
UBP6YFR010W RPL20BP0CX24 172 aaPredicted RBP3.68□□□□□ -1.82
UBP6YFR010W SLY1P22213 666 aa3.68□□□□□ -1.82
UBP6YFR010W SEC22P22214 214 aa3.68□□□□□ -1.82
UBP6YFR010W MGT1P26188 188 aa3.68□□□□□ -1.82
UBP6YFR010W FUN19P28003 413 aaPredicted RBP3.68□□□□□ -1.82
UBP6YFR010W MUD1P32605 298 aaKnown RBP3.68□□□□□ -1.82
UBP6YFR010W GSP1P32835 219 aaKnown RBP3.68□□□□□ -1.82
UBP6YFR010W GSP2P32836 220 aaKnown RBP3.68□□□□□ -1.82
UBP6YFR010W YKR041WP36134 250 aa3.68□□□□□ -1.82
UBP6YFR010W PRS3P38689 320 aaKnown RBP3.68□□□□□ -1.82
UBP6YFR010W ARP1P38696 384 aa3.68□□□□□ -1.82
UBP6YFR010W FCY21P40039 528 aa3.68□□□□□ -1.82
UBP6YFR010W RGI1P40043 161 aaPredicted RBP3.68□□□□□ -1.82
UBP6YFR010W YJR012CP47087 207 aa3.68□□□□□ -1.82
UBP6YFR010W YGR151CP53287 111 aa3.68□□□□□ -1.82
UBP6YFR010W YLR152CP54072 576 aa3.68□□□□□ -1.82
UBP6YFR010W YMR279CQ03263 540 aa3.68□□□□□ -1.82
UBP6YFR010W DML1Q03652 475 aa3.68□□□□□ -1.82
UBP6YFR010W SNU56Q03782 492 aaKnown RBP3.68□□□□□ -1.82
UBP6YFR010W GAS2Q06135 555 aa3.68□□□□□ -1.82
UBP6YFR010W CTR3Q06686 241 aa3.68□□□□□ -1.82
UBP6YFR010W SKI7Q08491 747 aaPredicted RBP3.68□□□□□ -1.82
UBP6YFR010W THP3Q12049 470 aaKnown RBP3.68□□□□□ -1.82
UBP6YFR010W CDC28P00546 298 aaKnown RBP3.67□□□□□ -1.82
UBP6YFR010W HEM2P05373 342 aa3.67□□□□□ -1.82
UBP6YFR010W RAD52P06778 471 aaKnown RBP3.67□□□□□ -1.82
UBP6YFR010W RPL31AP0C2H8 113 aaKnown RBP3.67□□□□□ -1.82
UBP6YFR010W EXO70P19658 623 aa3.67□□□□□ -1.82
UBP6YFR010W MCK1P21965 375 aaKnown RBP3.67□□□□□ -1.82
UBP6YFR010W QRI5P32344 111 aa3.67□□□□□ -1.82
UBP6YFR010W YKL097CP34245 136 aa3.67□□□□□ -1.82
UBP6YFR010W YBR242WP38331 238 aa3.67□□□□□ -1.82
UBP6YFR010W EFM1P38732 585 aa3.67□□□□□ -1.82
UBP6YFR010W YHR035WP38769 630 aa3.67□□□□□ -1.82
UBP6YFR010W FAA2P39518 744 aa3.67□□□□□ -1.82
UBP6YFR010W CTK3P46963 296 aaPredicted RBP3.67□□□□□ -1.82
UBP6YFR010W OST3P48439 350 aa3.67□□□□□ -1.82
UBP6YFR010W PYK2P52489 506 aaKnown RBP3.67□□□□□ -1.82
UBP6YFR010W YIP4P53093 235 aa3.67□□□□□ -1.82
UBP6YFR010W POP6P53218 158 aa3.67□□□□□ -1.82
UBP6YFR010W LST7P53237 242 aa3.67□□□□□ -1.82
UBP6YFR010W MTM1P53320 366 aa3.67□□□□□ -1.82
UBP6YFR010W MPA43P53583 542 aaPredicted RBP3.67□□□□□ -1.82
UBP6YFR010W CAF40P53829 373 aa3.67□□□□□ -1.82
UBP6YFR010W GPI15P53961 229 aa3.67□□□□□ -1.82
UBP6YFR010W ASI3P53983 676 aa3.67□□□□□ -1.82
UBP6YFR010W RNY1Q02933 434 aaKnown RBP3.67□□□□□ -1.82
UBP6YFR010W YDR387CQ04162 555 aa3.67□□□□□ -1.82
UBP6YFR010W YPR091CQ06833 770 aa3.67□□□□□ -1.82
UBP6YFR010W SSK1Q07084 712 aa3.67□□□□□ -1.82
UBP6YFR010W HEM25Q07534 307 aa3.67□□□□□ -1.82
UBP6YFR010W LDB18Q07887 179 aa3.67□□□□□ -1.82
UBP6YFR010W SIR4P11978 1358 aa3.67□□□□□ -1.82
UBP6YFR010W MTF1P14908 341 aaKnown RBP3.66□□□□□ -1.82
UBP6YFR010W CTA1P15202 515 aa3.66□□□□□ -1.82
UBP6YFR010W HEM15P16622 393 aa3.66□□□□□ -1.82
UBP6YFR010W PHO80P20052 293 aa3.66□□□□□ -1.82
UBP6YFR010W IFM1P25038 676 aa3.66□□□□□ -1.82
UBP6YFR010W SUA7P29055 345 aaPredicted RBP3.66□□□□□ -1.82
UBP6YFR010W APE2P32454 952 aaKnown RBP3.66□□□□□ -1.82
UBP6YFR010W YKL075CP36083 450 aa3.66□□□□□ -1.82
UBP6YFR010W TVP38P36164 337 aa3.66□□□□□ -1.82
UBP6YFR010W CBP4P37267 147 aa3.66□□□□□ -1.82
UBP6YFR010W RRG9P40156 214 aa3.66□□□□□ -1.82
UBP6YFR010W YCH1P42937 148 aa3.66□□□□□ -1.82
UBP6YFR010W MAL13P53338 473 aa3.66□□□□□ -1.82
UBP6YFR010W CPR8P53728 308 aa3.66□□□□□ -1.82
UBP6YFR010W YMR166CQ03829 368 aa3.66□□□□□ -1.82
UBP6YFR010W SWF1Q04629 336 aa3.66□□□□□ -1.82
UBP6YFR010W MCH4Q08268 501 aa3.66□□□□□ -1.82
UBP6YFR010W USV1Q12132 391 aa3.66□□□□□ -1.82
UBP6YFR010W TPO4Q12256 659 aa3.66□□□□□ -1.82
UBP6YFR010W SME1Q12330 94 aaPredicted RBP3.66□□□□□ -1.82
UBP6YFR010W YCL001W-BQ96VH2 84 aa3.66□□□□□ -1.82
UBP6YFR010W BCY1P07278 416 aaKnown RBP3.65□□□□□ -1.82
UBP6YFR010W YOL163WP0CF20 169 aa3.65□□□□□ -1.82
UBP6YFR010W GLN3P18494 730 aa3.65□□□□□ -1.82
UBP6YFR010W FUN26P31381 517 aa3.65□□□□□ -1.82
UBP6YFR010W MKK1P32490 508 aa3.65□□□□□ -1.82
UBP6YFR010W SUI1P32911 108 aaKnown RBP3.65□□□□□ -1.82
UBP6YFR010W YBR096WP38256 230 aa3.65□□□□□ -1.82
UBP6YFR010W IPI1P38803 334 aaPredicted RBP3.65□□□□□ -1.82
UBP6YFR010W RBG1P39729 369 aa3.65□□□□□ -1.82
UBP6YFR010W YIA6P40556 373 aa3.65□□□□□ -1.82
UBP6YFR010W TDA10P42938 290 aa3.65□□□□□ -1.82
UBP6YFR010W GAT1P43574 510 aa3.65□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms