RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W RAD7P06779 565 aa1.88□□□□□ -2.11
NIC96YFR002W RPL43AP0CX25 92 aaKnown RBP1.88□□□□□ -2.11
NIC96YFR002W RPL43BP0CX26 92 aa1.88□□□□□ -2.11
NIC96YFR002W RME1P32338 300 aaKnown RBP1.88□□□□□ -2.11
NIC96YFR002W BMH2P34730 273 aaKnown RBP1.88□□□□□ -2.11
NIC96YFR002W OM14P38325 134 aa1.88□□□□□ -2.11
NIC96YFR002W HIS2P38635 335 aa1.88□□□□□ -2.11
NIC96YFR002W SMF2P38778 549 aa1.88□□□□□ -2.11
NIC96YFR002W CTK3P46963 296 aaPredicted RBP1.88□□□□□ -2.11
NIC96YFR002W AIM24P47127 394 aa1.88□□□□□ -2.11
NIC96YFR002W KAP114P53067 1004 aa1.88□□□□□ -2.11
NIC96YFR002W YGR018CP53211 109 aa1.88□□□□□ -2.11
NIC96YFR002W VHS1Q03785 461 aa1.88□□□□□ -2.11
NIC96YFR002W YOR029WQ12243 111 aa1.88□□□□□ -2.11
NIC96YFR002W RAD3P06839 778 aa1.87□□□□□ -2.11
NIC96YFR002W RRT12P25381 491 aa1.87□□□□□ -2.11
NIC96YFR002W ERG9P29704 444 aa1.87□□□□□ -2.11
NIC96YFR002W IES6P32617 166 aa1.87□□□□□ -2.11
NIC96YFR002W GEP4P38812 185 aa1.87□□□□□ -2.11
NIC96YFR002W SPL2P38839 148 aa1.87□□□□□ -2.11
NIC96YFR002W KEG1P43614 200 aa1.87□□□□□ -2.11
NIC96YFR002W PGA2P53903 129 aa1.87□□□□□ -2.11
NIC96YFR002W PBP4Q07362 185 aaKnown RBP1.87□□□□□ -2.11
NIC96YFR002W BTS1Q12051 335 aa1.87□□□□□ -2.11
NIC96YFR002W APC9Q12107 265 aa1.87□□□□□ -2.11
NIC96YFR002W SEN1Q00416 2231 aaKnown RBP1.87□□□□□ -2.11
NIC96YFR002W ADH1P00330 348 aaKnown RBP1.87□□□□□ -2.11
NIC96YFR002W TDH2P00358 332 aaKnown RBP1.87□□□□□ -2.11
NIC96YFR002W ATP6P00854 259 aa1.87□□□□□ -2.11
NIC96YFR002W MATALPHA1P0CY06 175 aa1.87□□□□□ -2.11
NIC96YFR002W HMLALPHA1P0CY07 175 aa1.87□□□□□ -2.11
NIC96YFR002W MER1P16523 270 aa1.87□□□□□ -2.11
NIC96YFR002W DCC1P25559 380 aa1.87□□□□□ -2.11
NIC96YFR002W YCR016WP25617 290 aaKnown RBP1.87□□□□□ -2.11
NIC96YFR002W KRE6P32486 720 aa1.87□□□□□ -2.11
NIC96YFR002W SKG6P32900 734 aaPredicted RBP1.87□□□□□ -2.11
NIC96YFR002W CBF5P33322 483 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
NIC96YFR002W TIR2P33890 251 aa1.87□□□□□ -2.11
NIC96YFR002W MMS21P38632 267 aa1.87□□□□□ -2.11
NIC96YFR002W RBG1P39729 369 aa1.87□□□□□ -2.11
NIC96YFR002W COA1P40452 197 aa1.87□□□□□ -2.11
NIC96YFR002W FMC1P40491 155 aa1.87□□□□□ -2.11
NIC96YFR002W AGP3P43548 558 aa1.87□□□□□ -2.11
NIC96YFR002W COX16P47081 118 aa1.87□□□□□ -2.11
NIC96YFR002W KEL2P50090 882 aa1.87□□□□□ -2.11
NIC96YFR002W SEH1P53011 349 aaKnown RBP1.87□□□□□ -2.11
NIC96YFR002W IRC4Q03036 179 aa1.87□□□□□ -2.11
NIC96YFR002W YMR209CQ03648 457 aa1.87□□□□□ -2.11
NIC96YFR002W GMC2Q06201 188 aa1.87□□□□□ -2.11
NIC96YFR002W SMC5Q08204 1093 aa1.87□□□□□ -2.11
NIC96YFR002W YPQ1Q12010 308 aa1.87□□□□□ -2.11
NIC96YFR002W CDC36P06100 191 aaPredicted RBP1.86□□□□□ -2.11
NIC96YFR002W MET16P18408 261 aaPredicted RBP1.86□□□□□ -2.11
NIC96YFR002W CDC50P25656 391 aa1.86□□□□□ -2.11
NIC96YFR002W RPS5P26783 225 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W ASF2P32448 525 aaPredicted RBP1.86□□□□□ -2.11
NIC96YFR002W MGM101P32787 269 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W CYM1P32898 989 aa1.86□□□□□ -2.11
NIC96YFR002W PRS4P38063 326 aaPredicted RBP1.86□□□□□ -2.11
NIC96YFR002W SIP3P38717 1229 aa1.86□□□□□ -2.11
NIC96YFR002W TCD1P38756 429 aa1.86□□□□□ -2.11
NIC96YFR002W BIG1P38813 335 aa1.86□□□□□ -2.11
NIC96YFR002W TRF5P48561 642 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W KTR6P54070 446 aa1.86□□□□□ -2.11
NIC96YFR002W MRPS17Q03246 237 aaPredicted RBP1.86□□□□□ -2.11
NIC96YFR002W ENT5Q03769 411 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W MYO5Q04439 1219 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W YLR283WQ05867 314 aa1.86□□□□□ -2.11
NIC96YFR002W SAM4Q08985 325 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W PRP8P33334 2413 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W DAL81P21657 970 aa1.86□□□□□ -2.11
NIC96YFR002W YSR3P23501 404 aa1.86□□□□□ -2.11
NIC96YFR002W ACB1P31787 87 aa1.86□□□□□ -2.11
NIC96YFR002W MRPS9P38120 278 aa1.86□□□□□ -2.11
NIC96YFR002W YER034WP40022 185 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W LSG1P53145 640 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W CDC14Q00684 551 aa1.86□□□□□ -2.11
NIC96YFR002W SED5Q01590 340 aa1.86□□□□□ -2.11
NIC96YFR002W SDO1Q07953 250 aaKnown RBP1.86□□□□□ -2.11
NIC96YFR002W IES4Q08561 116 aa1.86□□□□□ -2.11
NIC96YFR002W EAF3Q12432 401 aa1.86□□□□□ -2.11
NIC96YFR002W HAC1P41546 238 aa1.85□□□□□ -2.11
NIC96YFR002W MRX5P47007 382 aa1.85□□□□□ -2.11
NIC96YFR002W YPS5P53057 165 aa1.85□□□□□ -2.11
NIC96YFR002W NOP13P53883 403 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
NIC96YFR002W SUR7P54003 302 aa1.85□□□□□ -2.11
NIC96YFR002W SSQ1Q05931 657 aaPredicted RBP1.85□□□□□ -2.11
NIC96YFR002W BER1Q06688 274 aaKnown RBP1.85□□□□□ -2.11
NIC96YFR002W PAM18Q07914 168 aa1.85□□□□□ -2.11
NIC96YFR002W SLF1Q12034 447 aaKnown RBP1.85□□□□□ -2.11
NIC96YFR002W RPN6Q12377 434 aa1.85□□□□□ -2.11
NIC96YFR002W YCR024C-BQ3E7Z8 88 aa1.85□□□□□ -2.11
NIC96YFR002W NAG1Q8TGN9 163 aa1.85□□□□□ -2.11
NIC96YFR002W CBP6P07253 162 aaPredicted RBP1.85□□□□□ -2.11
NIC96YFR002W CHA1P25379 360 aaKnown RBP1.85□□□□□ -2.11
NIC96YFR002W YHR182WP38870 785 aa1.85□□□□□ -2.11
NIC96YFR002W YJR030CP47101 745 aa1.85□□□□□ -2.11
NIC96YFR002W SNZ1Q03148 297 aa1.85□□□□□ -2.11
NIC96YFR002W ECM11Q04110 302 aa1.85□□□□□ -2.11
NIC96YFR002W VBA1Q04301 562 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms