RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W LST7P53237 242 aa0.87□□□□□ -2.27
YCK3YER123W AQR1P53943 586 aa0.87□□□□□ -2.27
YCK3YER123W RRB1Q04225 511 aaKnown RBP0.87□□□□□ -2.27
YCK3YER123W CDD1Q06549 142 aa0.87□□□□□ -2.27
YCK3YER123W YPR078CQ06813 372 aa0.87□□□□□ -2.27
YCK3YER123W CLP1Q08685 445 aaPredicted RBP0.87□□□□□ -2.27
YCK3YER123W SGT2Q12118 346 aaKnown RBP0.87□□□□□ -2.27
YCK3YER123W SMC6Q12749 1114 aa0.87□□□□□ -2.27
YCK3YER123W MET2P08465 486 aa0.87□□□□□ -2.27
YCK3YER123W SNF6P18888 332 aa0.87□□□□□ -2.27
YCK3YER123W DBR1P24309 405 aaKnown RBP0.87□□□□□ -2.27
YCK3YER123W SIF2P38262 535 aa0.87□□□□□ -2.27
YCK3YER123W MED8P38304 223 aa0.87□□□□□ -2.27
YCK3YER123W LCP5P40079 357 aaPredicted RBP0.87□□□□□ -2.27
YCK3YER123W JHD2P47156 728 aaPredicted RBP0.87□□□□□ -2.27
YCK3YER123W CAX4P53223 239 aa0.87□□□□□ -2.27
YCK3YER123W FAS1P07149 2051 aaKnown RBP0.86□□□□□ -2.27
YCK3YER123W TDH2P00358 332 aaKnown RBP0.86□□□□□ -2.27
YCK3YER123W TDH3P00359 332 aaKnown RBP RIP-Chip data0.86□□□□□ -2.27not detected
YCK3YER123W CTA1P15202 515 aa0.86□□□□□ -2.27
YCK3YER123W RME1P32338 300 aaKnown RBP0.86□□□□□ -2.27
YCK3YER123W TVP38P36164 337 aa0.86□□□□□ -2.27
YCK3YER123W YBL081WP38180 368 aaKnown RBP0.86□□□□□ -2.27
YCK3YER123W RFT1P38206 574 aaPredicted RBP0.86□□□□□ -2.27
YCK3YER123W SNL1P40548 159 aa0.86□□□□□ -2.27
YCK3YER123W DSN1P40568 576 aa0.86□□□□□ -2.27
YCK3YER123W LSG1P53145 640 aaKnown RBP0.86□□□□□ -2.27
YCK3YER123W YPL080CQ02826 108 aa0.86□□□□□ -2.27
YCK3YER123W PEX27Q08580 376 aa0.86□□□□□ -2.27
YCK3YER123W YPL264CQ08980 353 aa0.86□□□□□ -2.27
YCK3YER123W TAF10Q12030 206 aa0.86□□□□□ -2.27
YCK3YER123W FSH3Q99369 266 aa0.86□□□□□ -2.27
YCK3YER123W EFM4P40516 257 aa0.85□□□□□ -2.27
YCK3YER123W ECO1P43605 281 aa0.85□□□□□ -2.27
YCK3YER123W YJL055WP47044 245 aa0.85□□□□□ -2.27
YCK3YER123W NUP84P52891 726 aa0.85□□□□□ -2.27
YCK3YER123W FMP48P53233 369 aa0.85□□□□□ -2.27
YCK3YER123W AIM33Q04516 312 aa0.85□□□□□ -2.27
YCK3YER123W DXO1Q06349 442 aa0.85□□□□□ -2.27
YCK3YER123W RPS16AP0CX51 143 aaKnown RBP0.84□□□□□ -2.27
YCK3YER123W RPS16BP0CX52 143 aaKnown RBP0.84□□□□□ -2.27
YCK3YER123W KRE1P17260 313 aa0.84□□□□□ -2.27
YCK3YER123W GRR1P24814 1151 aa0.84□□□□□ -2.27
YCK3YER123W UBC6P33296 250 aaPredicted RBP0.84□□□□□ -2.27
YCK3YER123W EBP2P36049 427 aaKnown RBP0.84□□□□□ -2.27
YCK3YER123W RXT2P38255 430 aa0.84□□□□□ -2.27
YCK3YER123W SMF2P38778 549 aa0.84□□□□□ -2.27
YCK3YER123W ATG7P38862 630 aa0.84□□□□□ -2.27
YCK3YER123W HMF1P40037 129 aaKnown RBP0.84□□□□□ -2.27
YCK3YER123W BTT1P40314 149 aaPredicted RBP0.84□□□□□ -2.27
YCK3YER123W SLM1P40485 686 aa0.84□□□□□ -2.27
YCK3YER123W MNN5P46982 586 aa0.84□□□□□ -2.27
YCK3YER123W YGL118CP53132 145 aa0.84□□□□□ -2.27
YCK3YER123W MPS2P53159 387 aa0.84□□□□□ -2.27
YCK3YER123W VPS9P54787 451 aa0.84□□□□□ -2.27
YCK3YER123W SMP3Q04174 516 aa0.84□□□□□ -2.27
YCK3YER123W CSM3Q04659 317 aa0.84□□□□□ -2.27
YCK3YER123W PEX30Q06169 523 aa0.84□□□□□ -2.27
YCK3YER123W MSA1Q08471 629 aa0.84□□□□□ -2.27
YCK3YER123W SAM4Q08985 325 aaKnown RBP0.84□□□□□ -2.27
YCK3YER123W CCW14O13547 238 aa0.83□□□□□ -2.28
YCK3YER123W RPL6BP05739 176 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W ARF2P19146 181 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W MNE1P24720 663 aa0.83□□□□□ -2.28
YCK3YER123W ARO4P32449 370 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W KRE6P32486 720 aa0.83□□□□□ -2.28
YCK3YER123W VMA8P32610 256 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W YKL187CP34231 750 aa0.83□□□□□ -2.28
YCK3YER123W CTM1P38818 585 aa0.83□□□□□ -2.28
YCK3YER123W VPS45P38932 577 aa0.83□□□□□ -2.28
YCK3YER123W GDI1P39958 451 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W YCH1P42937 148 aa0.83□□□□□ -2.28
YCK3YER123W YFR045WP43617 309 aa0.83□□□□□ -2.28
YCK3YER123W RPL6AQ02326 176 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W GAS3Q03655 524 aa0.83□□□□□ -2.28
YCK3YER123W YFH1Q07540 174 aa0.83□□□□□ -2.28
YCK3YER123W FEX1Q08913 375 aa0.83□□□□□ -2.28
YCK3YER123W FEX2Q08991 375 aa0.83□□□□□ -2.28
YCK3YER123W RPN6Q12377 434 aa0.83□□□□□ -2.28
YCK3YER123W TFC7Q12415 435 aa0.83□□□□□ -2.28
YCK3YER123W MRX4Q12467 430 aa0.83□□□□□ -2.28
YCK3YER123W AIM45Q12480 344 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W DAP2P18962 818 aa0.83□□□□□ -2.28
YCK3YER123W SAG1P20840 650 aa0.83□□□□□ -2.28
YCK3YER123W DBF2P22204 572 aa0.83□□□□□ -2.28
YCK3YER123W MRPL20P22354 195 aaPredicted RBP0.83□□□□□ -2.28
YCK3YER123W MRPL40P36534 297 aa0.83□□□□□ -2.28
YCK3YER123W GDT1P38301 280 aaPredicted RBP0.83□□□□□ -2.28
YCK3YER123W ASP1P38986 381 aaPredicted RBP0.83□□□□□ -2.28
YCK3YER123W JEM1P40358 645 aa0.83□□□□□ -2.28
YCK3YER123W SER33P40510 469 aa0.83□□□□□ -2.28
YCK3YER123W EPL1P43572 832 aa0.83□□□□□ -2.28
YCK3YER123W YML6P51998 286 aa0.83□□□□□ -2.28
YCK3YER123W MLC1P53141 149 aa0.83□□□□□ -2.28
YCK3YER123W SDS23P53172 527 aa0.83□□□□□ -2.28
YCK3YER123W YNL050CP53952 270 aa0.83□□□□□ -2.28
YCK3YER123W YNL040WP53960 456 aaPredicted RBP0.83□□□□□ -2.28
YCK3YER123W ADH6Q04894 360 aaKnown RBP0.83□□□□□ -2.28
YCK3YER123W IES3Q12345 250 aa0.83□□□□□ -2.28
YCK3YER123W TRM10Q12400 293 aa0.83□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms