RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C IBA57P47158 497 aa1.07□□□□□ -2.24
SEC3YER008C TPC1P53257 314 aa1.07□□□□□ -2.24
SEC3YER008C CPD1P53314 239 aa1.07□□□□□ -2.24
SEC3YER008C TDA1Q03533 586 aa1.07□□□□□ -2.24
SEC3YER008C RVB1Q03940 463 aaKnown RBP1.07□□□□□ -2.24
SEC3YER008C BNA7Q04066 261 aa1.07□□□□□ -2.24
SEC3YER008C YDR222WQ04925 415 aa1.07□□□□□ -2.24
SEC3YER008C THI20Q08224 551 aa1.07□□□□□ -2.24
SEC3YER008C RGS2Q99188 309 aa1.07□□□□□ -2.24
SEC3YER008C HTB1P02293 131 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C HTB2P02294 131 aa1.06□□□□□ -2.24
SEC3YER008C GDT1P38301 280 aaPredicted RBP1.06□□□□□ -2.24
SEC3YER008C RCK2P38623 610 aa1.06□□□□□ -2.24
SEC3YER008C SER33P40510 469 aa1.06□□□□□ -2.24
SEC3YER008C GCN20P43535 752 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C LCB3P47013 409 aa1.06□□□□□ -2.24
SEC3YER008C HOC1P47124 396 aa1.06□□□□□ -2.24
SEC3YER008C YPS5P53057 165 aa1.06□□□□□ -2.24
SEC3YER008C LSG1P53145 640 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C NUP116Q02630 1113 aa1.06□□□□□ -2.24
SEC3YER008C RPM2Q02773 1202 aa1.06□□□□□ -2.24
SEC3YER008C IRC4Q03036 179 aa1.06□□□□□ -2.24
SEC3YER008C FAR8Q05040 523 aa1.06□□□□□ -2.24
SEC3YER008C FRE8Q12209 686 aa1.06□□□□□ -2.24
SEC3YER008C YLR108CQ12259 485 aa1.06□□□□□ -2.24
SEC3YER008C ARF2P19146 181 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C GIT1P25346 518 aa1.06□□□□□ -2.24
SEC3YER008C TIR2P33890 251 aa1.06□□□□□ -2.24
SEC3YER008C CHK1P38147 527 aa1.06□□□□□ -2.24
SEC3YER008C SHC1P39000 512 aa1.06□□□□□ -2.24
SEC3YER008C FRT2P39734 528 aa1.06□□□□□ -2.24
SEC3YER008C DSN1P40568 576 aa1.06□□□□□ -2.24
SEC3YER008C YJL213WP40896 331 aa1.06□□□□□ -2.24
SEC3YER008C VHT1P53241 593 aa1.06□□□□□ -2.24
SEC3YER008C MAL13P53338 473 aa1.06□□□□□ -2.24
SEC3YER008C DIA1P54005 336 aa1.06□□□□□ -2.24
SEC3YER008C YHC1Q05900 231 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C ARC18Q05933 178 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C BNA5Q05979 453 aa1.06□□□□□ -2.24
SEC3YER008C TAF10Q12030 206 aa1.06□□□□□ -2.24
SEC3YER008C YGK3Q12222 375 aaPredicted RBP1.06□□□□□ -2.24
SEC3YER008C YCR102CP25608 368 aa1.06□□□□□ -2.24
SEC3YER008C MCR1P36060 302 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C MTC4P38335 694 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C FHL1P39521 936 aa1.06□□□□□ -2.24
SEC3YER008C RBG1P39729 369 aa1.06□□□□□ -2.24
SEC3YER008C RPH1P39956 796 aa1.06□□□□□ -2.24
SEC3YER008C FMC1P40491 155 aa1.06□□□□□ -2.24
SEC3YER008C TRM9P49957 279 aa1.06□□□□□ -2.24
SEC3YER008C YGL159WP53110 370 aa1.06□□□□□ -2.24
SEC3YER008C YNR048WP53740 393 aa1.06□□□□□ -2.24
SEC3YER008C VAC7P53950 1165 aa1.06□□□□□ -2.24
SEC3YER008C SNX41Q04053 625 aa1.06□□□□□ -2.24
SEC3YER008C UTP15Q04305 513 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C SPO77Q06134 477 aa1.06□□□□□ -2.24
SEC3YER008C GMC2Q06201 188 aa1.06□□□□□ -2.24
SEC3YER008C MSA1Q08471 629 aa1.06□□□□□ -2.24
SEC3YER008C YPL229WQ99395 206 aa1.06□□□□□ -2.24
SEC3YER008C MDN1Q12019 4910 aaKnown RBP1.06□□□□□ -2.24
SEC3YER008C HIS1P00498 297 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C REP1P03871 373 aa1.05□□□□□ -2.24
SEC3YER008C RPS24AP0CX31 135 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C RPS24BP0CX32 135 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C STE18P18852 110 aa1.05□□□□□ -2.24
SEC3YER008C TIP1P27654 210 aaPredicted RBP1.05□□□□□ -2.24
SEC3YER008C SIP2P34164 415 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C YKL063CP35725 167 aa1.05□□□□□ -2.24
SEC3YER008C PRS2P38620 318 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C WSC4P38739 605 aa1.05□□□□□ -2.24
SEC3YER008C HAT2P39984 401 aa1.05□□□□□ -2.24
SEC3YER008C YIL001WP40560 513 aa1.05□□□□□ -2.24
SEC3YER008C MEP2P41948 499 aa1.05□□□□□ -2.24
SEC3YER008C EGT2P42835 1041 aa1.05□□□□□ -2.24
SEC3YER008C KEG1P43614 200 aa1.05□□□□□ -2.24
SEC3YER008C CIN2P46670 268 aa1.05□□□□□ -2.24
SEC3YER008C YJR085CP47131 105 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C MST27P53176 234 aa1.05□□□□□ -2.24
SEC3YER008C YGR018CP53211 109 aa1.05□□□□□ -2.24
SEC3YER008C CAF40P53829 373 aa1.05□□□□□ -2.24
SEC3YER008C TSR1Q07381 788 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C BRX1Q08235 291 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C DDC1Q08949 612 aa1.05□□□□□ -2.24
SEC3YER008C YDL109CQ12103 647 aa1.05□□□□□ -2.24
SEC3YER008C RPL35AP0CX84 120 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C RPL35BP0CX85 120 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C CPT1P17898 393 aa1.05□□□□□ -2.24
SEC3YER008C PPH21P23594 369 aa1.05□□□□□ -2.24
SEC3YER008C YEF1P32622 495 aa1.05□□□□□ -2.24
SEC3YER008C PMU1P36069 295 aa1.05□□□□□ -2.24
SEC3YER008C AIM29P36154 155 aa1.05□□□□□ -2.24
SEC3YER008C MAK5P38112 773 aaPredicted RBP1.05□□□□□ -2.24
SEC3YER008C RFC4P40339 323 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C YFR057WP43625 151 aa1.05□□□□□ -2.24
SEC3YER008C RPL15BP54780 204 aaPredicted RBP1.05□□□□□ -2.24
SEC3YER008C SNO1Q03144 224 aa1.05□□□□□ -2.24
SEC3YER008C YDR209CQ03480 137 aa1.05□□□□□ -2.24
SEC3YER008C TRM82Q03774 444 aa1.05□□□□□ -2.24
SEC3YER008C TIM18Q08749 192 aa1.05□□□□□ -2.24
SEC3YER008C PPT2Q12036 173 aa1.05□□□□□ -2.24
SEC3YER008C YLR126CQ12288 251 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 106.6 ms