RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	RTK1	Q12100	620 aa	Predicted RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YOL107W	Q12239	342 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	MTF1	P14908	341 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	PER1	P25625	357 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	MRP17	P28778	131 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	ATO2	P32907	282 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YKL187C	P34231	750 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	PHO11	P35842	467 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	PHO12	P38693	467 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	RPL14B	P38754	138 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	FET5	P43561	622 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	LSM7	P53905	115 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	VBA1	Q04301	562 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	THI7	Q05998	598 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YOR105W	Q08504	108 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	PSF1	Q12488	208 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	PAR32	Q12515	295 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY2A-LR1	P0C2J4	438 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY2A-F	P0CX61	438 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY2A-GR2	P0CX62	438 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY2A-C	P25383	438 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	ALK2	P32789	676 aa	Predicted RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	SLC1	P33333	303 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	MTH1	P35198	433 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	HSL7	P38274	827 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPT35	P38815	214 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	AVT2	P39981	480 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	PRK1	P40494	810 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YJR015W	P47090	510 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	NMA2	P53204	395 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	LST7	P53237	242 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	MRX11	Q03079	207 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YDR090C	Q03193	310 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	NUP53	Q03790	475 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	CAB5	Q03941	241 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YMR090W	Q04304	227 aa	Known RBP	4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	AGE1	Q04412	482 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY2A-B	Q12260	438 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY2A-DR1	Q12392	438 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YOL159C-A	Q3E769	90 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	TY2A-DR3	Q99303	438 aa		4.24	□□□□□ -1.73
YDR261C-D	YDR261C-D	YOR1	P53049	1477 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	NPR1	P22211	790 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	EMP70	P32802	667 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	COQ5	P49017	307 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	TPN1	P53099	579 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPR003C	P53394	754 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	SMA1	Q02651	245 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	NGL3	Q03210	505 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	CUE4	Q04201	117 aa	Predicted RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPR174C	Q06616	221 aa	Predicted RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	RAM2	P29703	316 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	THI4	P32318	326 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	CBT1	P36038	271 aa	Predicted RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	RPL14A	P36105	138 aa	Known RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YBL029W	P38201	376 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	AYR1	P40471	297 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	TAD1	P53065	400 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	SYF2	P53277	215 aa	Predicted RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	GOT1	Q03554	138 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	WTM1	Q12363	437 aa	Known RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	HTA1	P04911	132 aa	Known RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	HTA2	P04912	132 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	URA10	P30402	227 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	MSN4	P33749	630 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	MRPL28	P36527	147 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	AIM46	P38885	310 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	AXL2	P38928	823 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	NUP100	Q02629	959 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPL071C	Q02864	156 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	TDA6	Q06466	467 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	FRE7	Q12333	620 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	PRP46	Q12417	451 aa	Predicted RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YCL012C	Q8J0M4	134 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	ECM12	O13529	151 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	PUT2	P07275	575 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	TIP1	P27654	210 aa	Predicted RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	UGX2	P32772	223 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	LDH1	P38139	375 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YBR197C	P38306	217 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	NSA2	P40078	261 aa	Known RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	APQ12	P40532	138 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	APJ1	P53940	528 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YPL108W	Q02872	168 aa	Predicted RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	YMR178W	Q03219	274 aa	Known RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	HNT1	Q04344	158 aa	Known RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	TDA5	Q06417	326 aa	Known RBP	4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	PCL9	Q12477	304 aa		4.23	□□□□□ -1.73
YDR261C-D	YDR261C-D	CAR2	P07991	424 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	ARO3	P14843	370 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	PRE7	P23724	241 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	YKR041W	P36134	250 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	BET3	P36149	193 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	ERV15	P38312	142 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	MUP3	P38734	546 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	HMF1	P40037	129 aa	Known RBP	4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	VRG4	P40107	337 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	NPY1	P53164	384 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	FMP48	P53233	369 aa		4.22	□□□□□ -1.73
YDR261C-D	YDR261C-D	CRZ1	P53968	678 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms