RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA3	YBL075C	FLX1	P40464	311 aa		13.23	□□□□□ -0.29
SSA3	YBL075C	AIM32	Q04689	311 aa		13.23	□□□□□ -0.29
SSA3	YBL075C	YMR253C	Q04835	414 aa		13.23	□□□□□ -0.29
SSA3	YBL075C	BSC1	Q12140	328 aa		13.23	□□□□□ -0.29
SSA3	YBL075C	EHD3	P28817	500 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	AXL2	P38928	823 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	GAT2	P40209	560 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	GAT1	P43574	510 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	AVT4	P50944	713 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	ARG7	Q04728	441 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	FRQ1	Q06389	190 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	MRX9	Q07349	420 aa	Known RBP	13.22	□□□□□ -0.29
SSA3	YBL075C	FDH1	Q08911	376 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	YDR056C	Q12025	205 aa		13.22	□□□□□ -0.29
SSA3	YBL075C	HTS1	P07263	546 aa	Known RBP	13.21	□□□□□ -0.29
SSA3	YBL075C	MET22	P32179	357 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	BTT1	P40314	149 aa	Predicted RBP	13.21	□□□□□ -0.29
SSA3	YBL075C	ELO3	P40319	345 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	YSA1	Q01976	231 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	YDC1	Q02896	317 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	TY1A-DR2	Q03964	440 aa	Known RBP	13.21	□□□□□ -0.29
SSA3	YBL075C	NOC4	Q06512	552 aa	Predicted RBP	13.21	□□□□□ -0.29
SSA3	YBL075C	IPK1	Q06667	281 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	PRM4	Q12498	284 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	FSH3	Q99369	266 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	EXG1	P23776	448 aa	Known RBP	13.21	□□□□□ -0.29
SSA3	YBL075C	SIS1	P25294	352 aa	Known RBP	13.21	□□□□□ -0.29
SSA3	YBL075C	SKN1	P33336	771 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	ATF2	P53296	535 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	SAE3	P89114	91 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	ATC1	Q04005	294 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	TY1A-MR1	Q04215	440 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	BDS1	Q08347	646 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	TY1A-BL	Q12266	440 aa		13.21	□□□□□ -0.29
SSA3	YBL075C	AI3	P03877	415 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	PPG1	P32838	368 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	MRPL4	P36517	319 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	CCC1	P47818	322 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	TIS11	P47977	285 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	COG7	P53195	279 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	APM1	Q00776	475 aa	Predicted RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	MET31	Q03081	177 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	YNR034W-A	Q3E841	98 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	RPS31	P05759	152 aa	Known RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	UBI4	P0CG63	381 aa	Known RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	RPL40A	P0CH08	128 aa	Known RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	RPL40B	P0CH09	128 aa	Known RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	PET18	P25362	215 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	NTF2	P33331	125 aa	Known RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	LOT5	P34234	306 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	CHS7	P38843	316 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	PTH1	P38876	190 aa	Known RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	CHL4	P38907	458 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	IBA57	P47158	497 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	MEP3	P53390	489 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	STD1	Q02794	444 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	UTP15	Q04305	513 aa	Known RBP	13.2	□□□□□ -0.3
SSA3	YBL075C	BTS1	Q12051	335 aa		13.2	□□□□□ -0.3
SSA3	YBL075C	RFA1	P22336	621 aa	Known RBP	13.19	□□□□□ -0.3
SSA3	YBL075C	EMC3	P36039	253 aa		13.19	□□□□□ -0.3
SSA3	YBL075C	PAU15	P40585	124 aa		13.19	□□□□□ -0.3
SSA3	YBL075C	EXG2	P52911	562 aa		13.19	□□□□□ -0.3
SSA3	YBL075C	RNH70	P53331	553 aa		13.19	□□□□□ -0.3
SSA3	YBL075C	GIM3	P53900	129 aa		13.19	□□□□□ -0.3
SSA3	YBL075C	SEC13	Q04491	297 aa	Known RBP	13.19	□□□□□ -0.3
SSA3	YBL075C	RTK1	Q12100	620 aa	Predicted RBP	13.19	□□□□□ -0.3
SSA3	YBL075C	SGA1	P08019	549 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	YEF1	P32622	495 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	YIL165C	P40446	119 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	MOB1	P40484	314 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	HXT14	P42833	540 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	YJR012C	P47087	207 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	RSM10	Q03201	203 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	SRO7	Q12038	1033 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	TFC7	Q12415	435 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	PDX1	P16451	410 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	SNF5	P18480	905 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	PRE1	P22141	198 aa	Known RBP	13.18	□□□□□ -0.3
SSA3	YBL075C	GSF2	Q04697	403 aa	Known RBP	13.18	□□□□□ -0.3
SSA3	YBL075C	FRE6	Q12473	712 aa		13.18	□□□□□ -0.3
SSA3	YBL075C	PNO1	Q99216	274 aa	Known RBP	13.18	□□□□□ -0.3
SSA3	YBL075C	PPH21	P23594	369 aa		13.17	□□□□□ -0.3
SSA3	YBL075C	PBN1	P25580	416 aa		13.17	□□□□□ -0.3
SSA3	YBL075C	ADD66	P36040	267 aa		13.17	□□□□□ -0.3
SSA3	YBL075C	PAU24	P38155	120 aa		13.17	□□□□□ -0.3
SSA3	YBL075C	MGE1	P38523	228 aa		13.17	□□□□□ -0.3
SSA3	YBL075C	YIL161W	P40449	235 aa	Known RBP	13.17	□□□□□ -0.3
SSA3	YBL075C	YPL272C	Q08984	517 aa		13.17	□□□□□ -0.3
SSA3	YBL075C	QCR7	P00128	127 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	RPP2B	P02400	110 aa	Known RBP	13.16	□□□□□ -0.3
SSA3	YBL075C	PHO2	P07269	559 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	ATG15	P25641	520 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	TIP1	P27654	210 aa	Predicted RBP	13.16	□□□□□ -0.3
SSA3	YBL075C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	13.16	□□□□□ -0.3	not detected
SSA3	YBL075C	YCR087C-A	P37263	153 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	MED6	P38782	295 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	TAT2	P38967	592 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	RFU1	Q08003	200 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	ATS1	P31386	333 aa		13.16	□□□□□ -0.3
SSA3	YBL075C	MF(ALPHA)2	P32435	120 aa		13.16	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms