RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	HPT1	Q04178	221 aa	Known RBP	3.31	□□□□□ -1.88
YAL004W	YAL004W	SNT309	Q06091	175 aa	Predicted RBP	3.31	□□□□□ -1.88
YAL004W	YAL004W	BSP1	Q06604	576 aa		3.31	□□□□□ -1.88
YAL004W	YAL004W	PBP4	Q07362	185 aa	Known RBP	3.31	□□□□□ -1.88
YAL004W	YAL004W	APC9	Q12107	265 aa		3.31	□□□□□ -1.88
YAL004W	YAL004W	YKL183C-A	Q3E765	70 aa		3.31	□□□□□ -1.88
YAL004W	YAL004W	HEM2	P05373	342 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	TPK3	P05986	398 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	TRP4	P07285	380 aa	Predicted RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	NMT1	P14743	455 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	ARF2	P19146	181 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	RPB8	P20436	146 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	NUP1	P20676	1076 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	CLB2	P24869	491 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	ACB1	P31787	87 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	PPZ2	P33329	710 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	RPS1A	P33442	255 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	TAF14	P35189	244 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	VPS21	P36017	210 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	YBR056W	P38081	501 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YBR241C	P38142	488 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	IST2	P38250	946 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	FES1	P38260	290 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	AME1	P38313	324 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	CYC2	P38909	366 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	RPH1	P39956	796 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YJR154W	P47181	346 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	LYS20	P48570	428 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	VMA10	P48836	114 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	PRP24	P49960	444 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	GTR2	P53290	341 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	PXR1	P53335	271 aa	Predicted RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	RRN9	P53437	365 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	GPI15	P53961	229 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YNL010W	P53981	241 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	LSM3	P57743	89 aa	Known RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	SED5	Q01590	340 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	SKI8	Q02793	397 aa	Predicted RBP	3.3	□□□□□ -1.88
YAL004W	YAL004W	YPL080C	Q02826	108 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YDR476C	Q03362	224 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YDR209C	Q03480	137 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	HER2	Q03557	464 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	CSN9	Q03981	162 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	PEX12	Q04370	399 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	DYN3	Q04949	312 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	FAR10	Q06001	478 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	SEC10	Q06245	871 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YEH2	Q07950	538 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YOR387C	Q08910	206 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YPL247C	Q12523	523 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	YOR338W	Q99326	363 aa		3.3	□□□□□ -1.88
YAL004W	YAL004W	SPT3	P06844	337 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	QCR2	P07257	368 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	MRPL8	P22353	238 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	NUP2	P32499	720 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	VAM7	P32912	316 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	SPO23	P33757	523 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	DTR1	P38125	572 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	FIG1	P38224	298 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	ATG7	P38862	630 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	SOP4	P39543	234 aa	Predicted RBP	3.29	□□□□□ -1.88
YAL004W	YAL004W	EXO1	P39875	702 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	DDI1	P40087	428 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	GAB1	P41733	394 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	UFE1	P41834	346 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	LSM1	P47017	172 aa	Known RBP	3.29	□□□□□ -1.88
YAL004W	YAL004W	TAD2	P47058	250 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	HMS2	P47175	358 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	AIF1	P52923	378 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	SHY1	P53266	389 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	OKP1	P53298	406 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	MKC7	P53379	596 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	PRP38	Q00723	242 aa	Predicted RBP	3.29	□□□□□ -1.88
YAL004W	YAL004W	RMI1	Q02685	241 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	YET2	Q04210	160 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	ARP10	Q04549	284 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	NDE2	Q07500	545 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	ESA1	Q08649	445 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	MUM3	Q08750	479 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	SET6	Q12529	373 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	SAS5	Q99314	248 aa		3.29	□□□□□ -1.88
YAL004W	YAL004W	QCR7	P00128	127 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	TUB1	P09733	447 aa	Known RBP	3.28	□□□□□ -1.88
YAL004W	YAL004W	BAR1	P12630	587 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	KIN3	P22209	435 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	RNA15	P25299	296 aa	Predicted RBP	3.28	□□□□□ -1.88
YAL004W	YAL004W	YCR006C	P25350	157 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	BUB2	P26448	306 aa	Predicted RBP	3.28	□□□□□ -1.88
YAL004W	YAL004W	NDC1	P32500	655 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	PTM1	P32857	523 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	SGE1	P33335	543 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	ASK1	P35734	292 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	SRP102	P36057	244 aa	Predicted RBP	3.28	□□□□□ -1.88
YAL004W	YAL004W	CAF4	P36130	643 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	PDX3	P38075	228 aa	Known RBP	3.28	□□□□□ -1.88
YAL004W	YAL004W	URA8	P38627	578 aa	Predicted RBP	3.28	□□□□□ -1.88
YAL004W	YAL004W	ARP1	P38696	384 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	LAG1	P38703	411 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	POG1	P40473	351 aa		3.28	□□□□□ -1.88
YAL004W	YAL004W	SLM1	P40485	686 aa		3.28	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms