RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ADSSL1Q8N142 457 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 PROM2Q8N271 834 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 PYROXD1Q8WU10 500 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 SEPT1Q8WYJ6 367 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 DEPDC7Q96QD5 511 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 C14orf93Q9H972 538 aaKnown RBP5.34□□□□□ -1.56
SKP1-202ENST00000353411 AMACRQ9UHK6 382 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 CNOT7Q9UIV1 285 aaKnown RBP5.34□□□□□ -1.56
SKP1-202ENST00000353411 DNAJC12Q9UKB3 198 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 KCNJ14Q9UNX9 436 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 SSX2IPQ9Y2D8 614 aa5.34□□□□□ -1.56
SKP1-202ENST00000353411 AFF2P51816 1311 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ADGRL2O95490 1459 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TRIM64CA6NLI5 447 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 H3BRJ5 948 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 VWA5AO00534 786 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 LPXNO60711 386 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 GPC4O75487 556 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 IL10P22301 178 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PTPREP23469 700 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 DLG4P78352 724 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 BFSP1Q12934 665 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PTGDRQ13258 359 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TOB2Q14106 344 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 LPIN1Q14693 890 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 KCTD21Q4G0X4 260 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TTC27Q6P3X3 843 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SCFD1Q8WVM8 642 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 FADS3Q9Y5Q0 445 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 MED23Q9ULK4 1368 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SAC3D1A6NKF1 404 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 BTBD18B2RXH4 712 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 GNGT2O14610 69 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 MMP1P03956 469 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 KCNA6P17658 529 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CDK17Q00537 523 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TRIP13Q15645 432 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 C15orf59Q2T9L4 293 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 TSGA10IPQ3SY00 556 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 LIN52Q52LA3 116 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CAVIN4Q5BKX8 364 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TTMPQ5BVD1 217 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 HERC4Q5GLZ8 1057 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 ATAD3BQ5T9A4 648 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 RFX8Q6ZV50 586 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ENGASEQ8NFI3 743 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SH3TC2Q8TF17 1288 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TTC17Q96AE7 1141 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PHACTR3Q96KR7 559 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TRABDQ9H4I3 376 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PANK4Q9NVE7 773 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 GIN1Q9NXP7 522 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SEL1LQ9UBV2 794 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ATPIF1Q9UII2 106 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 HERC5Q9UII4 1024 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 CFLARO15519 480 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ADCY6O43306 1168 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 DTNBO60941 627 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TOM1L1O75674 476 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TTLL1O95922 423 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 NLRP11P59045 1033 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 BNC1Q01954 994 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TFCP2Q12800 502 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 WDR44Q5JSH3 913 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 RNF220Q5VTB9 566 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ARL6IP4Q66PJ3 421 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 ARHGAP27Q6ZUM4 889 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PDIK1LQ8N165 341 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 OR2W6PQ8NHA6 318 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 POM121Q96HA1 1249 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 OLFM1Q99784 485 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 POTECB2RU33 542 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 B4E1Z4 1266 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ERMARDQ5T6L9 678 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CAPSLQ8WWF8 208 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CASKIN2Q8WXE0 1202 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 MAGED4Q96JG8 741 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 MYH3P11055 1940 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TMEM191CA6NGB0 347 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TJP3O95049 919 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TMEM191BP0C7N4 346 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 YWHAGP61981 247 aaKnown RBP eCLIP5.33□□□□□ -1.56
SKP1-202ENST00000353411 ZNF268Q14587 947 aaPredicted RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 RNF43Q68DV7 783 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CCDC137Q6PK04 289 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 BARGINQ6ZT62 677 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 ACAD11Q709F0 780 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 NAT14Q8WUY8 206 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 LRRC39Q96DD0 335 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 SNRKQ9NRH2 765 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 TLR7Q9NYK1 1049 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 TRIM17Q9Y577 477 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 MED14O60244 1454 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 CPS1P31327 1500 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 NCK2O43639 380 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PHF2O75151 1096 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 PSMG1O95456 288 aa5.33□□□□□ -1.56
SKP1-202ENST00000353411 HSPA1AP0DMV8 641 aaKnown RBP5.33□□□□□ -1.56
SKP1-202ENST00000353411 HSPA1BP0DMV9 641 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms