RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A BNA7Q04066 261 aa7.09□□□□□ -1.27
TGA1tA(UGC)A MRPL51Q06090 140 aaPredicted RBP7.09□□□□□ -1.27
TGA1tA(UGC)A RRP9Q06506 573 aaKnown RBP7.09□□□□□ -1.27
TGA1tA(UGC)A RTC5Q12108 567 aaKnown RBP7.09□□□□□ -1.27
TGA1tA(UGC)A YKL187CP34231 750 aa7.08□□□□□ -1.28
TGA1tA(UGC)A YRB2P40517 327 aa7.08□□□□□ -1.28
TGA1tA(UGC)A IRC5P43610 853 aa7.08□□□□□ -1.28
TGA1tA(UGC)A SSY5P47002 699 aa7.08□□□□□ -1.28
TGA1tA(UGC)A SIP18P50263 79 aa7.08□□□□□ -1.28
TGA1tA(UGC)A ACS2P52910 683 aaKnown RBP7.08□□□□□ -1.28
TGA1tA(UGC)A MAL12P53341 584 aa7.08□□□□□ -1.28
TGA1tA(UGC)A PGA1P53896 198 aa7.08□□□□□ -1.28
TGA1tA(UGC)A PET191Q02772 108 aa7.08□□□□□ -1.28
TGA1tA(UGC)A TAZ1Q06510 381 aa7.08□□□□□ -1.28
TGA1tA(UGC)A TAF3Q12297 353 aa7.08□□□□□ -1.28
TGA1tA(UGC)A YGR161W-CQ3E744 92 aa7.08□□□□□ -1.28
TGA1tA(UGC)A Q0297Q9ZZV8 51 aa7.08□□□□□ -1.28
TGA1tA(UGC)A RPS16AP0CX51 143 aaKnown RBP7.07□□□□□ -1.28
TGA1tA(UGC)A RPS16BP0CX52 143 aaKnown RBP7.07□□□□□ -1.28
TGA1tA(UGC)A SAM35P14693 329 aa7.07□□□□□ -1.28
TGA1tA(UGC)A STE50P25344 346 aa7.07□□□□□ -1.28
TGA1tA(UGC)A SED4P25365 1065 aa7.07□□□□□ -1.28
TGA1tA(UGC)A NAB2P32505 525 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
TGA1tA(UGC)A PEP12P32854 288 aa7.07□□□□□ -1.28
TGA1tA(UGC)A YBR220CP38318 560 aa7.07□□□□□ -1.28
TGA1tA(UGC)A PRS3P38689 320 aaKnown RBP7.07□□□□□ -1.28
TGA1tA(UGC)A RPS20P38701 121 aaKnown RBP7.07□□□□□ -1.28
TGA1tA(UGC)A YTA6P40328 754 aa7.07□□□□□ -1.28
TGA1tA(UGC)A QDR1P40475 563 aa7.07□□□□□ -1.28
TGA1tA(UGC)A HIS6P40545 261 aa7.07□□□□□ -1.28
TGA1tA(UGC)A NQM1P53228 333 aaPredicted RBP7.07□□□□□ -1.28
TGA1tA(UGC)A TNA1P53322 534 aa7.07□□□□□ -1.28
TGA1tA(UGC)A INN1P53901 409 aa7.07□□□□□ -1.28
TGA1tA(UGC)A DMA2P53924 522 aa7.07□□□□□ -1.28
TGA1tA(UGC)A NUP116Q02630 1113 aa7.07□□□□□ -1.28
TGA1tA(UGC)A YPQ2Q06328 317 aa7.07□□□□□ -1.28
TGA1tA(UGC)A MLC2Q06580 163 aa7.07□□□□□ -1.28
TGA1tA(UGC)A MED2Q12124 431 aa7.07□□□□□ -1.28
TGA1tA(UGC)A WSC3Q12215 556 aa7.07□□□□□ -1.28
TGA1tA(UGC)A IZH2Q12442 317 aa7.07□□□□□ -1.28
TGA1tA(UGC)A PHO80P20052 293 aa7.06□□□□□ -1.28
TGA1tA(UGC)A OAC1P32332 324 aa7.06□□□□□ -1.28
TGA1tA(UGC)A DPB11P47027 764 aaPredicted RBP7.06□□□□□ -1.28
TGA1tA(UGC)A MTM1P53320 366 aa7.06□□□□□ -1.28
TGA1tA(UGC)A NUP49Q02199 472 aa7.06□□□□□ -1.28
TGA1tA(UGC)A HOT1Q03213 719 aa7.06□□□□□ -1.28
TGA1tA(UGC)A YDL114WQ07530 308 aa7.06□□□□□ -1.28
TGA1tA(UGC)A PML1Q07930 204 aaPredicted RBP7.06□□□□□ -1.28
TGA1tA(UGC)A YOR097CQ12274 175 aaPredicted RBP7.06□□□□□ -1.28
TGA1tA(UGC)A RSM22P36056 628 aa7.05□□□□□ -1.28
TGA1tA(UGC)A YBR096WP38256 230 aa7.05□□□□□ -1.28
TGA1tA(UGC)A YBR285WP38354 144 aa7.05□□□□□ -1.28
TGA1tA(UGC)A VBA2P38358 474 aaKnown RBP7.05□□□□□ -1.28
TGA1tA(UGC)A ILM1P47155 203 aa7.05□□□□□ -1.28
TGA1tA(UGC)A YMD8Q03697 442 aa7.05□□□□□ -1.28
TGA1tA(UGC)A YDR387CQ04162 555 aa7.05□□□□□ -1.28
TGA1tA(UGC)A YLR345WQ06137 509 aa7.05□□□□□ -1.28
TGA1tA(UGC)A YPR097WQ06839 1073 aa7.05□□□□□ -1.28
TGA1tA(UGC)A GAT3Q07928 141 aa7.05□□□□□ -1.28
TGA1tA(UGC)A FIT3Q08907 204 aa7.05□□□□□ -1.28
TGA1tA(UGC)A TY1A-BLQ12266 440 aa7.05□□□□□ -1.28
TGA1tA(UGC)A NFT1P0CE68 1218 aa7.04□□□□□ -1.28
TGA1tA(UGC)A BUR6P40096 142 aa7.04□□□□□ -1.28
TGA1tA(UGC)A PFS2P42841 465 aaKnown RBP7.04□□□□□ -1.28
TGA1tA(UGC)A SWP82P43554 623 aa7.04□□□□□ -1.28
TGA1tA(UGC)A COS10P52924 374 aa7.04□□□□□ -1.28
TGA1tA(UGC)A YIP5P53108 310 aa7.04□□□□□ -1.28
TGA1tA(UGC)A YDR391CQ04170 232 aa7.04□□□□□ -1.28
TGA1tA(UGC)A IPK1Q06667 281 aa7.04□□□□□ -1.28
TGA1tA(UGC)A TMC1Q08422 150 aaPredicted RBP7.04□□□□□ -1.28
TGA1tA(UGC)A MCT1Q12283 360 aa7.04□□□□□ -1.28
TGA1tA(UGC)A PDE2P06776 526 aa7.03□□□□□ -1.28
TGA1tA(UGC)A FAR1P21268 830 aa7.03□□□□□ -1.28
TGA1tA(UGC)A CPR2P23285 205 aa7.03□□□□□ -1.28
TGA1tA(UGC)A PCL1P24867 279 aa7.03□□□□□ -1.28
TGA1tA(UGC)A DAL80P26343 269 aa7.03□□□□□ -1.28
TGA1tA(UGC)A DBF20P32328 564 aa7.03□□□□□ -1.28
TGA1tA(UGC)A SPT10P35208 640 aa7.03□□□□□ -1.28
TGA1tA(UGC)A SOP4P39543 234 aaPredicted RBP7.03□□□□□ -1.28
TGA1tA(UGC)A QRI1P43123 477 aaKnown RBP7.03□□□□□ -1.28
TGA1tA(UGC)A MNT4P53745 580 aa7.03□□□□□ -1.28
TGA1tA(UGC)A SKO1Q02100 647 aa7.03□□□□□ -1.28
TGA1tA(UGC)A RSM28Q03430 361 aa7.03□□□□□ -1.28
TGA1tA(UGC)A AIM36Q03798 255 aa7.03□□□□□ -1.28
TGA1tA(UGC)A RNH1Q04740 348 aa7.03□□□□□ -1.28
TGA1tA(UGC)A RSC58Q07979 502 aa7.03□□□□□ -1.28
TGA1tA(UGC)A YLR040CQ07988 224 aa7.03□□□□□ -1.28
TGA1tA(UGC)A ACF2Q12168 779 aa7.03□□□□□ -1.28
TGA1tA(UGC)A PST2Q12335 198 aaKnown RBP7.03□□□□□ -1.28
TGA1tA(UGC)A FUN19P28003 413 aaPredicted RBP7.02□□□□□ -1.29
TGA1tA(UGC)A SRP102P36057 244 aaPredicted RBP7.02□□□□□ -1.29
TGA1tA(UGC)A YBR138CP38277 524 aa7.02□□□□□ -1.29
TGA1tA(UGC)A LSM4P40070 187 aaKnown RBP7.02□□□□□ -1.29
TGA1tA(UGC)A SLZ1P40167 298 aa7.02□□□□□ -1.29
TGA1tA(UGC)A YIL012WP40551 113 aa7.02□□□□□ -1.29
TGA1tA(UGC)A SAM37P50110 327 aa7.02□□□□□ -1.29
TGA1tA(UGC)A RMD9P53140 646 aaKnown RBP7.02□□□□□ -1.29
TGA1tA(UGC)A SED1Q01589 338 aa7.02□□□□□ -1.29
TGA1tA(UGC)A YTH1Q06102 208 aaPredicted RBP7.02□□□□□ -1.29
TGA1tA(UGC)A SYC1Q08553 188 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms