RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 ADO1P47143 340 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 RBG2P53295 368 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 IGO1P53897 168 aa2.2□□□□□ -2.06
snR43snR43 CRZ1P53968 678 aa2.2□□□□□ -2.06
snR43snR43 PET191Q02772 108 aa2.2□□□□□ -2.06
snR43snR43 VPS60Q03390 229 aa2.2□□□□□ -2.06
snR43snR43 ATG38Q05789 226 aaKnown RBP2.2□□□□□ -2.06
snR43snR43 SNA4Q07549 140 aa2.2□□□□□ -2.06
snR43snR43 CRT10Q08226 957 aa2.2□□□□□ -2.06
snR43snR43 YPR202WQ08993 238 aa2.2□□□□□ -2.06
snR43snR43 YDL109CQ12103 647 aa2.2□□□□□ -2.06
snR43snR43 PEP4P07267 405 aaKnown RBP2.19□□□□□ -2.06
snR43snR43 RPL35AP0CX84 120 aaKnown RBP2.19□□□□□ -2.06
snR43snR43 RPL35BP0CX85 120 aaKnown RBP2.19□□□□□ -2.06
snR43snR43 MER1P16523 270 aa2.19□□□□□ -2.06
snR43snR43 RPA135P22138 1203 aaKnown RBP2.19□□□□□ -2.06
snR43snR43 YCR051WP25631 222 aa2.19□□□□□ -2.06
snR43snR43 CAM1P29547 415 aaKnown RBP2.19□□□□□ -2.06
snR43snR43 TRS65P32893 560 aa2.19□□□□□ -2.06
snR43snR43 SWH1P35845 1188 aa2.19□□□□□ -2.06
snR43snR43 MRPL17P36528 281 aa2.19□□□□□ -2.06
snR43snR43 PEX18P38855 283 aa2.19□□□□□ -2.06
snR43snR43 IRC5P43610 853 aa2.19□□□□□ -2.06
snR43snR43 TOS2P50078 622 aa2.19□□□□□ -2.06
snR43snR43 YIP4P53093 235 aa2.19□□□□□ -2.06
snR43snR43 SLD3P53135 668 aa2.19□□□□□ -2.06
snR43snR43 MTM1P53320 366 aa2.19□□□□□ -2.06
snR43snR43 MPP6P53725 186 aaPredicted RBP2.19□□□□□ -2.06
snR43snR43 YNL046WP53956 172 aa2.19□□□□□ -2.06
snR43snR43 REX2P54964 269 aaKnown RBP2.19□□□□□ -2.06
snR43snR43 CIK1Q01649 594 aa2.19□□□□□ -2.06
snR43snR43 FMN1Q03778 218 aa2.19□□□□□ -2.06
snR43snR43 YDR179W-AQ03983 463 aa2.19□□□□□ -2.06
snR43snR43 FAR8Q05040 523 aa2.19□□□□□ -2.06
snR43snR43 ARV1Q06541 321 aa2.19□□□□□ -2.06
snR43snR43 GAT3Q07928 141 aa2.19□□□□□ -2.06
snR43snR43 RPN6Q12377 434 aa2.19□□□□□ -2.06
snR43snR43 YOR343CQ12484 108 aa2.19□□□□□ -2.06
snR43snR43 FSH3Q99369 266 aa2.19□□□□□ -2.06
snR43snR43 URA3P03962 267 aa2.18□□□□□ -2.06
snR43snR43 ARG81P05085 880 aa2.18□□□□□ -2.06
snR43snR43 RPS23AP0CX29 145 aaKnown RBP2.18□□□□□ -2.06
snR43snR43 RPS23BP0CX30 145 aa2.18□□□□□ -2.06
snR43snR43 SEC12P11655 471 aa2.18□□□□□ -2.06
snR43snR43 MSI1P13712 422 aa2.18□□□□□ -2.06
snR43snR43 ERD2P18414 219 aa2.18□□□□□ -2.06
snR43snR43 APA2P22108 325 aa2.18□□□□□ -2.06
snR43snR43 CNA1P23287 553 aa2.18□□□□□ -2.06
snR43snR43 HSP30P25619 332 aa2.18□□□□□ -2.06
snR43snR43 MCM10P32354 571 aa2.18□□□□□ -2.06
snR43snR43 MDH3P32419 343 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
snR43snR43 SLC1P33333 303 aa2.18□□□□□ -2.06
snR43snR43 LHP1P33399 275 aaKnown RBP2.18□□□□□ -2.06
snR43snR43 MSN4P33749 630 aa2.18□□□□□ -2.06
snR43snR43 GPX1P36014 167 aa2.18□□□□□ -2.06
snR43snR43 ZTA1P38230 334 aaKnown RBP2.18□□□□□ -2.06
snR43snR43 RCK1P38622 512 aa2.18□□□□□ -2.06
snR43snR43 YEL068CP39977 110 aa2.18□□□□□ -2.06
snR43snR43 RGI1P40043 161 aaPredicted RBP2.18□□□□□ -2.06
snR43snR43 SLZ1P40167 298 aa2.18□□□□□ -2.06
snR43snR43 SNM1P40993 198 aa2.18□□□□□ -2.06
snR43snR43 GLR1P41921 483 aaKnown RBP2.18□□□□□ -2.06
snR43snR43 CAK1P43568 368 aaPredicted RBP2.18□□□□□ -2.06
snR43snR43 YGL235WP53071 178 aa2.18□□□□□ -2.06
snR43snR43 YIP5P53108 310 aa2.18□□□□□ -2.06
snR43snR43 COS6P53344 381 aa2.18□□□□□ -2.06
snR43snR43 COS1P53822 381 aa2.18□□□□□ -2.06
snR43snR43 MTQ1P53944 314 aa2.18□□□□□ -2.06
snR43snR43 MRP51Q02950 344 aa2.18□□□□□ -2.06
snR43snR43 RSC9Q03124 581 aa2.18□□□□□ -2.06
snR43snR43 MMT1Q03218 510 aa2.18□□□□□ -2.06
snR43snR43 YMR279CQ03263 540 aa2.18□□□□□ -2.06
snR43snR43 YMR010WQ03687 405 aa2.18□□□□□ -2.06
snR43snR43 RVB1Q03940 463 aaKnown RBP2.18□□□□□ -2.06
snR43snR43 RIM9Q04734 239 aa2.18□□□□□ -2.06
snR43snR43 ADH6Q04894 360 aaKnown RBP2.18□□□□□ -2.06
snR43snR43 HOF1Q05080 669 aa2.18□□□□□ -2.06
snR43snR43 PIN3Q06449 215 aa2.18□□□□□ -2.06
snR43snR43 COQ10Q08058 207 aa2.18□□□□□ -2.06
snR43snR43 SGT1Q08446 395 aa2.18□□□□□ -2.06
snR43snR43 DCI1Q08558 271 aa2.18□□□□□ -2.06
snR43snR43 MUM3Q08750 479 aa2.18□□□□□ -2.06
snR43snR43 FIT3Q08907 204 aa2.18□□□□□ -2.06
snR43snR43 BTS1Q12051 335 aa2.18□□□□□ -2.06
snR43snR43 RTC5Q12108 567 aaKnown RBP2.18□□□□□ -2.06
snR43snR43 NCA2Q12374 616 aa2.18□□□□□ -2.06
snR43snR43 YHR214C-EQ8TGK0 99 aa2.18□□□□□ -2.06
snR43snR43 SUI3P09064 285 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 RPS16AP0CX51 143 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 RPS16BP0CX52 143 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 YPK2P18961 677 aa2.17□□□□□ -2.06
snR43snR43 RPB8P20436 146 aa2.17□□□□□ -2.06
snR43snR43 DBP3P20447 523 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 PUP2P32379 260 aa2.17□□□□□ -2.06
snR43snR43 ARP2P32381 391 aaKnown RBP2.17□□□□□ -2.06
snR43snR43 TIM12P32830 109 aa2.17□□□□□ -2.06
snR43snR43 VMA11P32842 164 aa2.17□□□□□ -2.06
snR43snR43 CLB6P32943 380 aa2.17□□□□□ -2.06
snR43snR43 ECM15P35195 104 aa2.17□□□□□ -2.06
snR43snR43 SPT10P35208 640 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms