RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 RHB1P25378 209 aa2.81□□□□□ -1.96
snR42snR42 TFC1P32367 649 aa2.81□□□□□ -1.96
snR42snR42 TIM12P32830 109 aa2.81□□□□□ -1.96
snR42snR42 SOF1P33750 489 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 MTR2P34232 184 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 SWH1P35845 1188 aa2.81□□□□□ -1.96
snR42snR42 SPC34P36131 295 aa2.81□□□□□ -1.96
snR42snR42 SKG1P36169 355 aa2.81□□□□□ -1.96
snR42snR42 PDX3P38075 228 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 MAL32P38158 584 aa2.81□□□□□ -1.96
snR42snR42 YMR262WP38430 313 aa2.81□□□□□ -1.96
snR42snR42 ARN2P38724 620 aa2.81□□□□□ -1.96
snR42snR42 SWD1P39706 426 aa2.81□□□□□ -1.96
snR42snR42 SEN34P39707 275 aa2.81□□□□□ -1.96
snR42snR42 CAK1P43568 368 aaPredicted RBP2.81□□□□□ -1.96
snR42snR42 DPB11P47027 764 aaPredicted RBP2.81□□□□□ -1.96
snR42snR42 BAT2P47176 376 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 BRR6P53062 197 aa2.81□□□□□ -1.96
snR42snR42 YGR016WP53209 190 aa2.81□□□□□ -1.96
snR42snR42 IGO1P53897 168 aa2.81□□□□□ -1.96
snR42snR42 SCS7Q03529 384 aa2.81□□□□□ -1.96
snR42snR42 DML1Q03652 475 aa2.81□□□□□ -1.96
snR42snR42 RVB1Q03940 463 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 HFD1Q04458 532 aa2.81□□□□□ -1.96
snR42snR42 VBA4Q04602 768 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 SNO4Q04902 237 aa2.81□□□□□ -1.96
snR42snR42 UTP21Q06078 939 aaPredicted RBP2.81□□□□□ -1.96
snR42snR42 NDL1Q06568 189 aa2.81□□□□□ -1.96
snR42snR42 SYO1Q07395 620 aa2.81□□□□□ -1.96
snR42snR42 PSR1Q07800 427 aa2.81□□□□□ -1.96
snR42snR42 COQ10Q08058 207 aa2.81□□□□□ -1.96
snR42snR42 CRT10Q08226 957 aa2.81□□□□□ -1.96
snR42snR42 OSW1Q08692 278 aa2.81□□□□□ -1.96
snR42snR42 HSP33Q08914 237 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 HSP32Q08992 237 aa2.81□□□□□ -1.96
snR42snR42 APC2Q12440 853 aa2.81□□□□□ -1.96
snR42snR42 RTN2Q12443 393 aa2.81□□□□□ -1.96
snR42snR42 YDL007C-AQ2V2Q0 85 aa2.81□□□□□ -1.96
snR42snR42 DET1Q99288 334 aaKnown RBP2.81□□□□□ -1.96
snR42snR42 PRB1P09232 635 aa2.8□□□□□ -1.96
snR42snR42 SEC12P11655 471 aa2.8□□□□□ -1.96
snR42snR42 SPO7P18410 259 aa2.8□□□□□ -1.96
snR42snR42 SNF6P18888 332 aa2.8□□□□□ -1.96
snR42snR42 RPB8P20436 146 aa2.8□□□□□ -1.96
snR42snR42 SCO1P23833 295 aa2.8□□□□□ -1.96
snR42snR42 BUD5P25300 642 aaPredicted RBP2.8□□□□□ -1.96
snR42snR42 YCR100CP25606 316 aa2.8□□□□□ -1.96
snR42snR42 IDH1P28834 360 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
snR42snR42 PRE2P30656 287 aaKnown RBP2.8□□□□□ -1.96
snR42snR42 MCM10P32354 571 aa2.8□□□□□ -1.96
snR42snR42 DPH5P32469 300 aaPredicted RBP2.8□□□□□ -1.96
snR42snR42 ECM15P35195 104 aa2.8□□□□□ -1.96
snR42snR42 RIB1P38066 345 aa2.8□□□□□ -1.96
snR42snR42 MTC6P38849 526 aa2.8□□□□□ -1.96
snR42snR42 RCY1P39531 840 aa2.8□□□□□ -1.96
snR42snR42 MPM1P40364 252 aa2.8□□□□□ -1.96
snR42snR42 POP1P41812 875 aa2.8□□□□□ -1.96
snR42snR42 MOB2P43563 287 aa2.8□□□□□ -1.96
snR42snR42 IDS2P46958 469 aa2.8□□□□□ -1.96
snR42snR42 MDE1P47095 244 aa2.8□□□□□ -1.96
snR42snR42 GPI8P49018 411 aa2.8□□□□□ -1.96
snR42snR42 PCP1P53259 346 aa2.8□□□□□ -1.96
snR42snR42 RBG2P53295 368 aaKnown RBP2.8□□□□□ -1.96
snR42snR42 COS1P53822 381 aa2.8□□□□□ -1.96
snR42snR42 ACS1Q01574 713 aa2.8□□□□□ -1.96
snR42snR42 MRPL1Q04599 285 aa2.8□□□□□ -1.96
snR42snR42 SNT309Q06091 175 aaPredicted RBP2.8□□□□□ -1.96
snR42snR42 CTS2Q06350 511 aa2.8□□□□□ -1.96
snR42snR42 YPR147CQ06522 304 aaKnown RBP2.8□□□□□ -1.96
snR42snR42 HRT1Q08273 121 aa2.8□□□□□ -1.96
snR42snR42 NIP7Q08962 181 aaKnown RBP2.8□□□□□ -1.96
snR42snR42 VIK1Q12045 647 aa2.8□□□□□ -1.96
snR42snR42 RLM1Q12224 676 aa2.8□□□□□ -1.96
snR42snR42 YOR343CQ12484 108 aa2.8□□□□□ -1.96
snR42snR42 TRA1P38811 3744 aa2.79□□□□□ -1.96
snR42snR42 SIR3P06701 978 aa2.79□□□□□ -1.96
snR42snR42 NFT1P0CE68 1218 aa2.79□□□□□ -1.96
snR42snR42 YOL162WP0CF19 215 aa2.79□□□□□ -1.96
snR42snR42 PDA1P16387 420 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 RPI1P23250 407 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 CPR2P23285 205 aa2.79□□□□□ -1.96
snR42snR42 CLB2P24869 491 aa2.79□□□□□ -1.96
snR42snR42 GIT1P25346 518 aa2.79□□□□□ -1.96
snR42snR42 RRP7P25368 297 aaPredicted RBP2.79□□□□□ -1.96
snR42snR42 UBC8P28263 218 aa2.79□□□□□ -1.96
snR42snR42 ITR1P30605 584 aa2.79□□□□□ -1.96
snR42snR42 DBF20P32328 564 aa2.79□□□□□ -1.96
snR42snR42 PDB1P32473 366 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 RPD3P32561 433 aa2.79□□□□□ -1.96
snR42snR42 TRS65P32893 560 aa2.79□□□□□ -1.96
snR42snR42 RSM22P36056 628 aa2.79□□□□□ -1.96
snR42snR42 YKL071WP36086 256 aa2.79□□□□□ -1.96
snR42snR42 YBR220CP38318 560 aa2.79□□□□□ -1.96
snR42snR42 YGP1P38616 354 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 RRP4P38792 359 aaKnown RBP2.79□□□□□ -1.96
snR42snR42 SBE22P38814 852 aa2.79□□□□□ -1.96
snR42snR42 PEX18P38855 283 aa2.79□□□□□ -1.96
snR42snR42 AVT7P40501 490 aa2.79□□□□□ -1.96
snR42snR42 NAS2P40555 220 aa2.79□□□□□ -1.96
snR42snR42 DIM1P41819 318 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms